SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04578
Pre Gene Modal
BGIBMGA005330
Annotation
hypothetical_protein_KGM_22219_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 2.777
 

Sequence

CDS
ATGGCTATTAGAAATCCCCGCCTTCCGCTGTTACCTGGCTATGGCACTAACCCGCTGCTAGGAAAAAAGAATTTCGGAGTACGTCCAGTATTTGCATCTATTGACAAAGTCAATATGCTAGTTGACAAAGCTGAAGGCGTGAATAAAGTTCCGTCGATGTACAGTCGGAAACAGGCACCTGATCTTCCAACTTGGATCATGTATGATAAGAACATTTTACGGTTTCAAGGGTTCTTTCAACAATCACTGCATGAAATGCGGTCAGCATCTCATATTTTACGTAAAGTTGATATTTTCTTTTTTCTCGAAGATGGTACTATAAAGGTTATAGAGCCGAAGACTGAGAATAGCGGATTGTCGCAAGGTACTTTGATAAGTCGCCAAAGAATACGTTTGCCTTTCAGTTACGACATGTACTATGATGTGCTTGATTTAAACATTGGCCGTGAAGTTACATTTTATGGAAAAACTTTTAAGATTGTAAACTGTGATAATTTTACAAGAGTATTTTTGAATCGTCTTGGTATAAACGTACCTGATCCTATTCCGTGGCCCGATGCAATTGAGAGATCACCTGCCGGTGGAAAACCTCCGAAACAGCGACCTTTTAAGCAATTCCTGGATTATGACAGACAAGTTTTAAGGTTTTACGGATACTGGGATGATCGGGATTCAGAATTTGGTATATTACACAACATGGAAATTCATTACTTTCTGGCGGATGATACCATCGAAATAAAGGAAGTCATGCCAGCCAATTCTGGAATGGAAGCCGGCCCTATGTTCTTGAAGAGAATGCGGTTACCACGAAAAATACCTTCGCATGTCGAAATGACGGGTGGTCCGAAGCAGGCCTCTTATGGTCCGGCGGATCTAAGCATCGGTGCTATTTTAAACGTTTTTGGTCGTAATGTAGTTTTGACCGACTGTGATCCATTCACTAAAGAATATTACAGAGTTACATACGGATTTGACACTTTCACACCGTTGACAATACCAAACAAGGATAGTTCAGAATGTGTGAGCACTAATGTATCAGAACGGAAGTTGCCTCCATGGAACGGCTACGGATCCTACGACGATTCAGCTGAGAACTGTCGTACTGTGGAACCGAAGGCACCTCATAGGGACTTTATGAAATTTATTCATAAAGACAGGGTCGGCTTTGATTCTCATATTCTTCGATTTGCTGCTCGACTCATAACCGACAACCCTGAAGATGAACGCCGCTATTTTATTGTTAAATACTTTTTGTGTGATGATACAATTGGTATCTTTGAGTTGGGCGAAAGGAACTCCGGTTTCAAGGGTGGTAAATTCTTTCGACGCGACAAGATGTATCTGCCAGACGTTGAATTTTTCGTTCCGAACGAACCGCCCGCGTACACAGACAAAGACATGTGGGTCGGAAACGAGCTGGTCATCAACAAGCATCGTTTTCGTCTCATTTCCGCTGACGAATACGCTTTGCGATATTTAGAATTGCATTCGGACGAGTATCCTATGGCGAACATAGCTTTGATTATGGACAAGATTCGAAGGTTTTTGGCGTCTCAAGAAAATGGTTATAAAAACTTTGTGGCTAAATACATGGAAGCTGTTTTACCAAATAATAAGGAACTTATGAGCGTCCGATGTTTCAAGCAAGCTCTGAAGGAAATAATGTGCGAAAAAATGACACAACACGAGTTTTTGACTTTGGTTAGACATTTTCGAGGTGATCCAGGGAAAGAGAAAAGCCCGCGACGTGAAATGATTAGGTCGTTAGTGTTTACGGAGTTGACCCGTGGCCTGTGGGACGACCGCGCCCGGCTGCGGGAGGGGCTCGTGCACGCCGACGAGCTCGGCACCGGGGCGGTGGCGCCGGAGCGCCTGCGACAGCTGCTCCGCGCCCACCGACTCACTATCAACACCGACCTCATGGACTGCATGCTGCAAGTATTGGAAAAGGACGAAAACTGTAACATTTACTATGAAGATTTGTTGAAGTTTTTGGATTTCCAAACTCGACCAGTGTTCAATCTGACGGAGGATGATTATCAGAAGGTCGTCAGGCACGCGCCACCGCTGAAAGATACTGAGTGCAAATTGTGGGCCGAAAACGAGAATCTCATCCAGGAAGGCTACGTCAACTGGAATGCATTCCTGTGCCAACTCAACTTGGAACATCTTGTGAAAGAACAATCTTAG
Protein
MAIRNPRLPLLPGYGTNPLLGKKNFGVRPVFASIDKVNMLVDKAEGVNKVPSMYSRKQAPDLPTWIMYDKNILRFQGFFQQSLHEMRSASHILRKVDIFFFLEDGTIKVIEPKTENSGLSQGTLISRQRIRLPFSYDMYYDVLDLNIGREVTFYGKTFKIVNCDNFTRVFLNRLGINVPDPIPWPDAIERSPAGGKPPKQRPFKQFLDYDRQVLRFYGYWDDRDSEFGILHNMEIHYFLADDTIEIKEVMPANSGMEAGPMFLKRMRLPRKIPSHVEMTGGPKQASYGPADLSIGAILNVFGRNVVLTDCDPFTKEYYRVTYGFDTFTPLTIPNKDSSECVSTNVSERKLPPWNGYGSYDDSAENCRTVEPKAPHRDFMKFIHKDRVGFDSHILRFAARLITDNPEDERRYFIVKYFLCDDTIGIFELGERNSGFKGGKFFRRDKMYLPDVEFFVPNEPPAYTDKDMWVGNELVINKHRFRLISADEYALRYLELHSDEYPMANIALIMDKIRRFLASQENGYKNFVAKYMEAVLPNNKELMSVRCFKQALKEIMCEKMTQHEFLTLVRHFRGDPGKEKSPRREMIRSLVFTELTRGLWDDRARLREGLVHADELGTGAVAPERLRQLLRAHRLTINTDLMDCMLQVLEKDENCNIYYEDLLKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAENENLIQEGYVNWNAFLCQLNLEHLVKEQS

Summary

EMBL
RSAL01000163    RVE45367.1    AGBW02014132    OWR42212.1    KQ461154    KPJ08499.1    + More
KQ459595    KPI95568.1    BABH01013920    BABH01013921    KPI95569.1    JTDY01001597    KOB73422.1    KQ971343    EFA03395.1    QOIP01000001    RLU26667.1    KK107468    EZA50209.1    KQ434885    KZC10057.1    KQ977873    KYM99144.1    KZ288387    PBC26433.1    KQ414740    KOC62040.1    KQ435719    KOX78940.1    KQ976396    KYM92839.1    KQ979863    KYN18767.1    KQ983211    KYQ46627.1    ADTU01011774    KQ981727    KYN37113.1    GEZM01077044    JAV63415.1    GFDL01000038    JAV35007.1    GBYB01007377    JAG77144.1    ADMH02000799    ETN65018.1    KK852751    KDR17132.1    UFQS01000152    UFQT01000152    SSX00552.1    SSX20932.1    UFQS01002315    UFQT01002315    SSX13785.1    SSX33206.1    AXCN02000248    ATLV01009983    KE524560    KFB35517.1    CH902642    EDV34107.1    AAAB01008904    EAL40432.4    APCN01002178    GEZM01077042    GEZM01077028    JAV63418.1    CH477605    EAT38397.1    CM000162    EDX01830.1    NNAY01000843    OXU26237.1    AXCM01001599    KB199651    ESP05007.1    PYGN01001564    PSN34041.1    AAGJ04068632    CCAG010021607    CP012528    ALC49838.1    AY823395    AAX08050.1    GG666612    EEN48857.1    CM000071    EAL26512.2    CH940655    EDW66381.1    CH479210    EDW32784.1    CH916378    EDV98557.1    CH933811    EDW06418.1    AHAT01025095    AHAT01025096    UXSR01000091    VDD74878.1    NEDP02004019    OWF47194.1    LSMT01000117    PFX26805.1    MRZV01000110    PIK58530.1    CH902619    EDV36835.1    AFYH01119873    AFYH01119874    AFYH01119875    AFYH01119876    AFYH01119877    DS469812    EDO32661.1    GEEE01013734    JAP49491.1    GEZM01077030    GEZM01077022    JAV63441.1    HE601624    CCD74648.1    KL250749    KGB36156.1    BC168809    AAI68809.1   
Pfam
PF06565   DUF1126        + More
PF00085   Thioredoxin
Interpro
IPR040193   EFHC1/EFHC2/EFHB        + More
IPR011992   EF-hand-dom_pair       
IPR010554   DUF1126       
IPR006602   Uncharacterised_DM10       
IPR035901   GIY-YIG_endonuc_sf       
IPR002048   EF_hand_dom       
IPR013766   Thioredoxin_domain       
IPR036249   Thioredoxin-like_sf       
IPR018247   EF_Hand_1_Ca_BS       
SUPFAM
SSF47473   SSF47473        + More
SSF82771   SSF82771       
SSF52833   SSF52833       
PDB
2Z13     E-value=9.04731e-24,     Score=276

Ontologies

Topology

Length:
729
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00061
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00008
outside
1  -  729
 
 

Population Genetic Test Statistics

Pi
223.95255
Theta
167.176889
Tajima's D
1.034228
CLR
0
CSRT
0.670266486675666
Interpretation
Uncertain
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