Silkworm Genome Informatics Database

Gene

KWMTBOMO04569

Pre Gene Modal

BGIBMGA005331

Annotation

putative_cyclophilin-9_[Danaus_plexippus]

Location

Bomo_Chr8(-):10016889-10025671 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.945

CDS

ATGTCTTTGTTTTCTACTTATTTACCGCAGTCGAAAAAAGAAATTACTCAACATCCATGGGCTAAATCGATAAAAGAACATCATGCGCATATCTATAAGATTGCTCATAATTCAATTAACAACCCTAAATATCCGTTTAAAGAAAATAAAATGACAAAGCCCAAAGATAAATTTACCGTTATAGGTAACTTTGTAACCAAAGAATTTATTTACTGCATCCGTTTAGTTCAAGGGCTACATAAATATAGAAAACACATATTTGATACCCCAGTGATCAGAGGTGTTACGGGTGTTGAATGGCCTGCCGTTTGGAATGATATAAAGATTAAATTTGGAGGAAAAGCATACTGTCTTCAATCACAAGTTGCAGTTGTTTTGAACGGCGAATTTATAGGTGGAGAACTTGAGTTGAAGAGCTTAATCGAATCAACCTATAAATACCATTTGAAATTAGATTATTGCAAAGAAAGTATAAAAGAATTTTATAAATTCGTAAAAAGTTCTGGTAGGCCATGTACTTACATGCATATTTGTATAGACGATGACCACATTGGCACTTTAATATTTATGCTGTACGCGGATATTGCACCGAACACGTGTGAGAATTTCCTTCGTCTTTGTAGAGCGAAAAGAGGCGGTTATAGCGGTACCCCTATACATCGAATTGTAAAAGATGGTTGGATACAGTGCGGAGGTTTTGGTTTGAAAACCACGAATTTGGATTGCGAAAATTTCATTGTACCACATGATAGGCGAGGTGTTTTATGTATGGCTAACGATGGCAGACACGTTGATTGTTCGACTCAATTTTTCGTTTTGCTTCAACCGGCTCCATGGATGGCACACAAATATGTTGCTTTTGGTCAATTAATCAAAGGTGAAGGTACTCTGAAAAAAATCGAAAGTGTACCTACCTGGTATGAATCTCCCTTATCGGACATTAAAATATTAAAGTCAGGAATTCTAAACATGGAATGTCAAGATATTAAAGTTACTAAAGGTACTAAAGAATACCTGAAAGGGCATGTTGAAGATCTTGTTGCTTTGGGTAATCTACTATACGAGAGCCTAATCGATAAAGTATTCATATTAATTGAGTTCAAACGCATTGCCCTCTTGGATGTTGAACCAGAAAGTCCGGAACTAAATGAAGAAGAGATAGGAAGTTTGAGAGCTACAAAAAGATTTTTAAAAAACAAACAAGACATTGAGAAACAATTACAAAGTAATCAAGCAGAAAACCGACAAAACGTTGATAGTGACAACCAGGAGTTCGATGTAGATGTATACGAATATGAATCGGAGGAGTCTTCATATCAACATGTATCGTTAACGGAACCAAGCGTAGTTACGAATGAAGAAAAGCCGTATTACTTACCTCTAACAGACGTACCGTATCCTGACGAAGTTGACTCTGTCTACGATTTAAAAAAATTTTTAAAAGGCAATTACTGCCTAGAGAGTGATTTAAAAAAGGATCAAATCTTCTTACATGAAACAAAACAGTTTTCTTCTGAATTATTTGATCTTGATGACGATGAATCGGTTTCAAGTTCAGTGGAATCATTGGCTTCCGACGATGAAAAGGAAATCAGGAAATATATAAAAATGAACGTCGATCGCGTTAGTTTTGCCGGTGACGTGATCAGAAATATTGCGGGGGGAACTGGAAAATTCAATTTATTTCAAGACTTTCGAAAGTCAGAATTGATCACGGACGATGAGCTTAGAAGGTTCAGATTAGCATCGATAGATCACCGCGCTCGCGAGGAAAGGAAAGTCTCCATCAGTCTACCTGACGAAGCCAAGCAGGTACATACAAAGATTAAAAGACGCCAGACAGGTTTCGTTAGGCCCGAAGATTTGGAAAGGATACATATTATACAGAAGCCTAGCTTTGATGAATCTTCAGATATTGATGAATCTACTACCAACATCGGCAGGAAAGTACGTATATCACCAACAGCGATGTCTCCACCGACAGCCCGAGAAAGTAGTCGACGACCAACCGCTTTTGTTCGGCCTTCAGACGATAATTCAGACACTGAAATGCGACGTTCTGTATTAACTCGGTTATATGAAGAGGTGACTGCCACAGATGAAATACCAGGCCCCACTCTGAAGGACTATAAACCAATATCAGAGACCCATCGTAAAAATTTAATGTTTCTTACGTATTCGCCGAGGTCTCACGTGATAAGCGAGGAGAATGCCCGTGAAAAATACATTAGGCGATCGTTGACAACTGAAAAAAACTTATACGAACCGGTTTTGAACTTGCAACACGGAAGGAGGGTAGCTCATAAAATATCTTCCGATTACGTGAAGACCATAGACCAAATAGAGCATAGACTAGATAATTCTTTGAGGAGCATAGAGTTTGCCAAAGTTCGGCCCACTCTGTCTGTTGCGGAATACCAAATGAAGAATAGTAAATTTAAAGAATTAAAAAAATCGACAAACGGAGATCTTAAAACAGAAACGGTAATGATACCGCCTCATGATTTTGACCAAAAGCGATCAGTCGCTGGTCTGAGATCACCAGATGACACACCACCGTCGATTTCAGACGAGGAAAATGCCTTTGAAAAGTAA

Protein

MSLFSTYLPQSKKEITQHPWAKSIKEHHAHIYKIAHNSINNPKYPFKENKMTKPKDKFTVIGNFVTKEFIYCIRLVQGLHKYRKHIFDTPVIRGVTGVEWPAVWNDIKIKFGGKAYCLQSQVAVVLNGEFIGGELELKSLIESTYKYHLKLDYCKESIKEFYKFVKSSGRPCTYMHICIDDDHIGTLIFMLYADIAPNTCENFLRLCRAKRGGYSGTPIHRIVKDGWIQCGGFGLKTTNLDCENFIVPHDRRGVLCMANDGRHVDCSTQFFVLLQPAPWMAHKYVAFGQLIKGEGTLKKIESVPTWYESPLSDIKILKSGILNMECQDIKVTKGTKEYLKGHVEDLVALGNLLYESLIDKVFILIEFKRIALLDVEPESPELNEEEIGSLRATKRFLKNKQDIEKQLQSNQAENRQNVDSDNQEFDVDVYEYESEESSYQHVSLTEPSVVTNEEKPYYLPLTDVPYPDEVDSVYDLKKFLKGNYCLESDLKKDQIFLHETKQFSSELFDLDDDESVSSSVESLASDDEKEIRKYIKMNVDRVSFAGDVIRNIAGGTGKFNLFQDFRKSELITDDELRRFRLASIDHRAREERKVSISLPDEAKQVHTKIKRRQTGFVRPEDLERIHIIQKPSFDESSDIDESTTNIGRKVRISPTAMSPPTARESSRRPTAFVRPSDDNSDTEMRRSVLTRLYEEVTATDEIPGPTLKDYKPISETHRKNLMFLTYSPRSHVISEENAREKYIRRSLTTEKNLYEPVLNLQHGRRVAHKISSDYVKTIDQIEHRLDNSLRSIEFAKVRPTLSVAEYQMKNSKFKELKKSTNGDLKTETVMIPPHDFDQKRSVAGLRSPDDTPPSISDEENAFEK

Uniprot

A0A212FFG1 A0A194PM17 A0A194QY38 A0A2A4J2C9

Pubmed

22118469 26354079

EMBL

AGBW02008827 OWR52474.1 KQ459599 KPI94372.1 KQ461154 KPJ08491.1 + More
NWSH01003769 PCG65838.1

Proteomes

UP000007151 UP000053268 UP000053240 UP000218220

Pfam

PF00160 Pro_isomerase

Interpro

IPR002130 Cyclophilin-type_PPIase_dom + More
IPR029000 Cyclophilin-like_dom_sf

SUPFAM

SSF50891 SSF50891

Gene 3D

2.40.100.10

ProteinModelPortal

A0A212FFG1 A0A194PM17 A0A194QY38 A0A2A4J2C9

PDB

1VDN E-value=7.77521e-23, Score=268

KEGG

101741687 no KO assigned | (RefSeq) NK-tumor recognition protein-like

GO

GO:0003755 GO:0000413 GO:0006457 GO:0042626 GO:0016887 GO:0007165 GO:0015031 GO:0016020 GO:0016742 GO:0003824

Length:

864

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0396600000000002

Exp number, first 60 AAs:

0.0039

Total prob of N-in:

0.00199

outside

1 - 864

Pi

161.354383

Theta

147.656467

Tajima's D

-0.951958

CLR

0.656026

CSRT

0.146292685365732

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics