Gene

KWMTBOMO04563

Pre Gene Modal

BGIBMGA005471

Annotation

acyl-CoA_Delta(11)_desaturase-like_[Bombyx_mori]

Location

Bomo_Chr8(+):9916432-9925401      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.664

CDS

ATGCCTCCGCAAGTAGACCCAATTCCTAGCGGAGTTGTTTTCGAATCGGACACGCAAACTGATGATCTTGGACTTGACAAGGATGTATCGGTACTGAAGAAAGCAACGCCCAAGAAACACGAACTAGTCTGGTTTAATATCATCTGGTTCCTGTTCTTACACATCAGCTCTCTTTACGGACTGTATCTTGTGTTTACGTCCGCTAAATGGCAAACTAATGTTTTTGCATTTGGCGTGCACTTGATGTGTGCGATAGGAATCGGGGCTGGATCTCACAGGCTATGGACACATAGAAGTTTCAAAGCTAGAACACCGCTGAGAATCGTTTTGATGATTTGGCAAACAATGGGCTTCCAGGACTGCATCTTCGAATGGGCTCGGGACCATAGAACGCACCACAAATACGCAGACACTGATGCTGACCCCCACAATGCTGAGAGAGGCCTGTTCTTTTCACATATGGGATGGCTCTGCTGCAAGAAGAGTCCTGAGGTTATCGAAGGTGGCCGAAGAATAGACTTGAGTGATCTTTACGCTGATCCCGTTGTTATGTTTCAGAAAAAGCATTATATGAAAATGATGCCGATTCTATGCTTCGTGCTACCTACAGTCATTCCTGTATACTTCTGGGACGAGACATGGTTGAATGCGTTCTTCATTCCGACAATATTACGATACACGTGCGGAATTAACGTTGTGTGGAGCGTGAACAGTTTCGCTCATACATTCGGTTATAGGCCTTATGACAAGTCGTTGAACCCACGAGAGAATATCGGCGTATGGATGATTTGCGTGGAAGGTTTTCACAACTACCATCACACGTTCCCGTGGGACTACCGCGCGACTGAACACCCTTTGTACAACATGTTGACGCCTACAATCGTGTTTATAGACGCGATGGCCATGATCGGACAAGCATACGACTTGAAAACCGTGCCTCATGATATAATAAAACAACGCACACATAGAACTGGCGACGGGACACATCAGCTATGGGGCTGGGATGATCCAGAATTCAATGAAAAACTCAAAGAGAAATATTCGCGAGTCAGTTACGCAGAAAGAAAATGTGGTTAG

Protein

MPPQVDPIPSGVVFESDTQTDDLGLDKDVSVLKKATPKKHELVWFNIIWFLFLHISSLYGLYLVFTSAKWQTNVFAFGVHLMCAIGIGAGSHRLWTHRSFKARTPLRIVLMIWQTMGFQDCIFEWARDHRTHHKYADTDADPHNAERGLFFSHMGWLCCKKSPEVIEGGRRIDLSDLYADPVVMFQKKHYMKMMPILCFVLPTVIPVYFWDETWLNAFFIPTILRYTCGINVVWSVNSFAHTFGYRPYDKSLNPRENIGVWMICVEGFHNYHHTFPWDYRATEHPLYNMLTPTIVFIDAMAMIGQAYDLKTVPHDIIKQRTHRTGDGTHQLWGWDDPEFNEKLKEKYSRVSYAERKCG

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9J7H9   T1RTG9   A0A2H1V1I2   A0A194PN07   A0A194QU16   A0A212EWB9   + More
A0A1L8D6B0   A0A212EVE8   A0A0U2F3B8   D2KCJ1   A0A1I8NWA7   D3TP66   W6ACM3   A0A1A9WBD6   A6P6Z1   A0A1L8EEG9   A0A1A9Z238   T1PCA2   Q8ITN6   A0A0M4EPW0   B4NJM8   Q9U972   B4M0C1   B4K744   Q7K4Y0   B3P4B3   B4QSA3   B3M2R7   Q94541   B4PPA5   B4JRQ4   Q9U967   A0A1W4UAN6   A0A1Q3FJ73   B0X4F1   H9JLG4   I3QPX9   Q75PL6   A0A1A9WBD7   B6CBS2   Q4A182   W5J215   A0A2M3YY30   A0A182PSJ2   A0A2M3YY13   A0A182RZM3   A0A182MQV9   A0A023EPC8   A0A1L8DYT8   Q6US82   A0A182K5W6   A0A2M4AGB5   A0A182FAQ2   A0A2M4BT31   A0A182Y3S6   A0A182NRU1   A0A182QY62   A0A182VZL7   A0A182UTT3   A0A182WSS9   A0A182LA27   F5HMH9   A0A182HLN2   A0A1A9V4Q8   Q9NB25   A0A0U2F3B9   A0A291P0G3   A0A0P0EGH8   Q17G31   A0A182IX38   T1RTF5   T1DNF2   A0A0K8TSL7   E9IYP9   T1RTD3   A0A340TYK2   A0A2H1V8Q0   D3TLV0   A0A1A9Z237   A0A0A1XD14   A0A0U2F3B3   U5KFT8   Q8MZZ4   S4PEM6   A0A0L0CLB5   A0A336M2F9   A0A1A9XNZ5   A0A336MXG6   A0A212FG51   A0A0M3L9S4   B4GZ70   U5EN19   Q29B20   A0A026W4N9   A0A3L8DXQ3   B4NJM7   I7B370   A0A151X3A2   A0A1S4EFC2   Q8WQQ0  

Pubmed

19121390    24500170    26354079    22118469    20353571    17916502    + More
25315136    12421411    17994087    18057021    10920187    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    9501419    17550304    18831750    20920257    23761445    24945155    15544945    25244985    20966253    12364791    14747013    17210077    11483431    28986331    28756777    26445454    17510324    26369729    21282665    25830018    24053512    12524345    12770579    23622113    26108605    15632085    23185243    24508170    30249741    11805319   

EMBL

BABH01013892    JX531666    AGO45851.1    ODYU01000221    SOQ34626.1    KQ459599    + More
KPI94378.1    KQ461154    KPJ08485.1    AGBW02012053    OWR45757.1    GEYN01000133    JAV01996.1    AGBW02012201    OWR45466.1    KP008119    AKU76406.1    GU205814    ADA61010.1    CCAG010012100    EZ423218    ADD19494.1    KF835695    AHI54575.1    AB300221    BAF69118.1    GFDG01001755    JAV17044.1    KA646397    AFP61026.1    AF417841    AAN31393.1    CP012526    ALC47890.1    CH964272    EDW84990.1    KRG00166.1    AJ245747    CAB52474.1    CH940650    EDW67283.1    KRF83228.1    CH933806    EDW16357.1    KRG02060.1    KRG02061.1    AE014297    AY051593    AAF54819.1    AAF54820.1    AAF54821.1    AAF54822.1    AAK93017.1    AAN13544.1    CH954181    EDV49358.1    CM000364    EDX13199.1    CH902617    EDV42388.1    KPU79686.1    KPU79687.1    U73160    AAB17283.1    CM000160    EDW97111.1    KRK03534.1    CH916373    EDV94444.1    AJ245748    CAB52475.1    GFDL01007467    JAV27578.1    DS232338    EDS40304.1    BABH01005826    JQ729998    AFK13830.1    JQ729997    AB166852    AFK13829.1    BAD18123.1    EU152332    ABX71627.1    AM076338    CAJ27975.1    ADMH02002143    ETN58292.1    GGFM01000428    MBW21179.1    GGFM01000421    MBW21172.1    AXCM01000026    GAPW01002266    JAC11332.1    GFDF01002622    JAV11462.1    AY362878    AAQ74258.1    GGFK01006347    MBW39668.1    GGFJ01006787    MBW55928.1    AXCN02001148    AAAB01008987    EAA43119.4    EGK97500.1    EGK97501.1    EGK97502.1    APCN01000909    AF272343    AAF81788.1    KP008120    MF687582    AKU76407.1    ATJ44508.1    MF687527    KZ149911    ATJ44453.1    PZC78117.1    KT261693    ALJ30233.1    CH477266    EAT45554.1    EAT45555.1    JX531653    NWSH01001519    AGO45838.1    PCG70996.1    GAMD01002940    JAA98650.1    GDAI01000236    JAI17367.1    GL767043    EFZ14309.1    JX531660    AGO45845.1    ODYU01001259    SOQ37220.1    EZ422402    ADD18678.1    GBXI01005435    JAD08857.1    KP008113    AKU76400.1    JX989152    AGR49311.1    AF482906    AAM28481.2    GAIX01006995    JAA85565.1    JRES01000328    KNC32244.1    UFQT01000109    SSX20158.1    UFQS01001440    UFQT01001440    SSX10910.1    SSX30588.1    AGBW02008720    OWR52703.1    KM366791    AIM40221.1    CH479198    EDW28088.1    GANO01000767    JAB59104.1    CM000070    EAL27178.1    KRS99817.1    KK107419    EZA51017.1    QOIP01000003    RLU25072.1    EDW84989.1    KRG00163.1    KRG00164.1    KRG00165.1    JX126483    AFO38464.1    KQ982566    KYQ54759.1    AY061988    AAL35750.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000095300    UP000092444    + More
UP000091820    UP000092445    UP000095301    UP000092553    UP000007798    UP000008792    UP000009192    UP000000803    UP000008711    UP000000304    UP000007801    UP000002282    UP000001070    UP000192221    UP000002320    UP000000673    UP000075885    UP000075900    UP000075883    UP000075881    UP000069272    UP000076408    UP000075884    UP000075886    UP000075920    UP000075903    UP000076407    UP000075882    UP000007062    UP000075840    UP000078200    UP000008820    UP000075880    UP000218220    UP000037069    UP000092443    UP000008744    UP000001819    UP000053097    UP000279307    UP000075809    UP000079169   

PRIDE

H9J7H9    T1RTG9    Q9U972    Q7K4Y0    Q94541    H9JLG4    + More
Q75PL6   

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       
IPR009160   Acyl-CoA_deSatase_haem/ster-bd       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9J7H9   T1RTG9   A0A2H1V1I2   A0A194PN07   A0A194QU16   A0A212EWB9   + More
A0A1L8D6B0   A0A212EVE8   A0A0U2F3B8   D2KCJ1   A0A1I8NWA7   D3TP66   W6ACM3   A0A1A9WBD6   A6P6Z1   A0A1L8EEG9   A0A1A9Z238   T1PCA2   Q8ITN6   A0A0M4EPW0   B4NJM8   Q9U972   B4M0C1   B4K744   Q7K4Y0   B3P4B3   B4QSA3   B3M2R7   Q94541   B4PPA5   B4JRQ4   Q9U967   A0A1W4UAN6   A0A1Q3FJ73   B0X4F1   H9JLG4   I3QPX9   Q75PL6   A0A1A9WBD7   B6CBS2   Q4A182   W5J215   A0A2M3YY30   A0A182PSJ2   A0A2M3YY13   A0A182RZM3   A0A182MQV9   A0A023EPC8   A0A1L8DYT8   Q6US82   A0A182K5W6   A0A2M4AGB5   A0A182FAQ2   A0A2M4BT31   A0A182Y3S6   A0A182NRU1   A0A182QY62   A0A182VZL7   A0A182UTT3   A0A182WSS9   A0A182LA27   F5HMH9   A0A182HLN2   A0A1A9V4Q8   Q9NB25   A0A0U2F3B9   A0A291P0G3   A0A0P0EGH8   Q17G31   A0A182IX38   T1RTF5   T1DNF2   A0A0K8TSL7   E9IYP9   T1RTD3   A0A340TYK2   A0A2H1V8Q0   D3TLV0   A0A1A9Z237   A0A0A1XD14   A0A0U2F3B3   U5KFT8   Q8MZZ4   S4PEM6   A0A0L0CLB5   A0A336M2F9   A0A1A9XNZ5   A0A336MXG6   A0A212FG51   A0A0M3L9S4   B4GZ70   U5EN19   Q29B20   A0A026W4N9   A0A3L8DXQ3   B4NJM7   I7B370   A0A151X3A2   A0A1S4EFC2   Q8WQQ0  

PDB

4YMK     E-value=1.25113e-87,     Score=823

KEGG

101741176    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) BmorNPRE; acyl-CoA Del

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016717   GO:0016021   GO:0006633   GO:0006636   GO:0004768   GO:0060179   GO:0042811   GO:0009744   GO:0045572   GO:0070328   GO:0042594   GO:0006723   GO:0010506   GO:0031410   GO:0045793   GO:0019216   GO:0048047   GO:0005783   GO:0040018   GO:0042593   GO:0005506   GO:0005789   GO:0016491   GO:0006629   GO:0006508   GO:0003676   GO:0004842   GO:0008565   GO:0015031   GO:0016020   GO:0016742   GO:0003824   GO:0055114  

PANTHER

PTHR11351  

Length:

358

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

89.0572900000001

Exp number, first 60 AAs:

18.57927

Total prob of N-in:

0.85908

POSSIBLE N-term signal

sequence

inside

1  -  41

TMhelix

42  -  64

outside

65  -  73

TMhelix

74  -  96

inside

97  -  192

TMhelix

193  -  210

outside

211  -  213

TMhelix

214  -  236

inside

237  -  358

 

 

Pi

217.635544

Theta

191.147812

Tajima's D

0.712765

CLR

0.481509

CSRT

0.575421228938553

Interpretation

Uncertain