Silkworm Genome Informatics Database

Gene

KWMTBOMO04559 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005337

Annotation

PREDICTED:_kazrin_isoform_X8_[Bombyx_mori]

Location

Bomo_Chr8(-):9766404-9792811 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.556

CDS

ATGGCGCTAGTGCGCCGCATTCTAGGCGACGCCCAGGCGAAACTACGAAAAATGGTCGATGAGCAAGTCTCGGTGGGTACAAGGGTGGACGCTGACCCTGAACCAGAGCCCGCTGATCCTCTCATCACACCCGCTAGTTCTGTCCTGGACAGATCTGACTTGGACCACAGACCGATACCTCCTGAGCGCCGATTGCTGATAGGAACACTCGACAAACCTCGTAACGGATCTCTTAACGCTGACAAAGATGCCGGCACACTTAATAGAACCACACGATTAGCGATCAGAAATGGCAAAGATAATCCTTTTATAGACGATGACAACAAAGAAAACCAAGCCAATGGGAAACTTGATTCTCCAGTGAAATGGTCCACTCAAAACGGCAGCGATAGTGGAACATACGCTGAGATAGGTAATGGAAGTAACAGTAATGAAAGAAATATCCTGGACCCGGCCGATAGCTCTGAGGAAGAAGTTCCTCTGCCTGATGCTACCTCTCCTGGGAGAAGCAGCGATGGGCCAGAGCCGCGAGCTGATATTACAGCCACCCTTGAAGAGGCTGCATCACCAGGCGCTCGTTCGGACAGATCTCGTCAAGAGGAAATACCGGCATCCCCTGGGATGCTAACAGGGGCGCAATTAGCTCGCCGGCTTAGAATGGAAAACGAACGATTACAGGCGGAATTAACAAGAGTACGCCGACTACTGGTGGCAGCTGCTGAAAGGGGAGAAGCTGGCAACGCTCTTCTCGAGAGAACAAAAGATGATGAATCACAAGAAACAATCGCTTTGGACCCTCAGCAGCTTGAAAAGGAACTGCTCTTAGCTAGAGAAGCTGTCAATTCTCTAAAGGCGGATAAGAAAAGGTTAAAAGCAGAGAAATTCGATTTGTTGAATCAAATGAAACAACTCTACGCTACGCTTGAAGACAAAGAGAAGGAATTGCGTGATTTCATAAGGAATTATGAACAGATGCGTTCAAGAGGTGGCGCTTCTTCTGCTCTCGGAGCGGAAAGAGCAGAGAGGGAGCGTGAGCGGGCCGCACTCTTACGGCACGCTAGGGATGAGGCCGAGCGAAGTTTGCAACTGGCCGCTGCACTCAGCGCAAGGGACACTCAACTCAGACATGCCAGAGAACAACTCTTTGAGGCAAGACGACAGCTACAAGCAGCCGGGTGTCTGTCTGAAGGCGAAAGTGTGGCATCACTAGGCATCGGACCTCCGATGTTATTGGGAGGACCTACAGGTCTGATCGGGGACAGAGGCAGTTGTAGTGCAGATTCTGGAGTAAGAGGTAGCAGCGATGGAGGTGCCACTTCGGTATGCGGAGGCAACCTATCAGATTCCACAGCGGAAGGATTACCTCCGACTATTGACTCATATGACACCGATGGTGCGTCTTTGGTATCATCCGCGCATCACATTTATCAATTGGGCACTCCACGAGACTGCAGTCCTACAGTGTCACCGCACAACAGCGGATCGCCATTCACACGATCAATTGATGCAGGATCATTGTCAAGGTCAGTGGAACAGCTATCGAGCCCTGGTGAATGTGAGGCAGCACTCGTGGGGGGTCTGCGAGGACGCTCGGGGGGCAGCGCGGGAAGTAAAGGTGCCCGTGGTCGAGGTTCTGCGTGGGGATCCATATCCCGCGTATTTGCAAGGAGCCGACACCGTACCAAATCCGGCAGCGCTGCTGTGAGCGGTCATGAAAGTGAACCAGTATACGCGGGTACCGGTAGTACGACCCGTGCATGGTCGCCGCTAAGTAGTGAAGCAGCTCTCCGCGAGGCCGCTTCCCAGCCTTTAGCAAGGTGGCGCACACCGGCAATCATAGCGTGGCTAGAACTGGCTTTAGGAATGCCACAATATGCAGCTGCAATAGCCGATAACGTCAAAAGTGGCAAGGTTCTGCTCGAGTTGACGGATGCAGATCTGGAAGTCGGACTGGGGATCTCACAGCCGATGCACCGCAAGAAGCTGCGTCTTGCTATCGAAGAACGAAGACGACCAGACTTGGTCAGGAATCCAACAATAGGTCAACTCAGCCACGCTTGGGTCGCCGCGGAATGGTTACCAGATTTGGGCCTTTCTCAGTATGCTGAGTCATTCCTGGCTAACCTGGTGGATGCCCGCATGCTCGACACTATAAGCAAGAAAGAGTTAGAGAAATACCTCGGAGTTACAAGGAAGTTCCATCAGGCCTCCATTGTTCACGGCATTCATCTGCTGAGGATAATGAAATACGATCGACAAGCTCTGGCGGTGAGACGTCACCAGTGTGAGAACGTAGACGCGGACCCCCTGGTTTGGACCAATCACAGATTTATGCGGTGGGCCCATAATATTGATTTAGGTGAATTCGCTGACAATCTCAAAGATAGTGGAGTTCATGGCGGCCTGGTAGTACTGGAGCCGTCTTTCACCGGAGAAACAATGGCCACTGCTCTGGGTATTCCACCGTCTAAGAGCATTATTAGGAGACATTTAGTGGCTGAGTTTGATGCCCTTGTAATTCCTGCGAGAAACATGTTTGGCCACCAAATAAGAATTTTGGGGAGACCATTTTCAAGGTCTGTTGCCACTGGATTACCTGGGATTGACCTCAGCGGAGAGTCAAGGCGACATAGTCTACGGGGCTCAATAACTCGTGCTCTAGGGGTACTTAAGCCTAAACACGAACGAACATCCCCTTCAAGTTCTAGCGAGAGCTCCAGCGTGCTCAGTCTCGGTACTCAATCATATTCGTACTCACCTCCTGTGGCGGTACGAACCCTCTCTCAGCTGAGCATGCAGTACGCGCCGCCGCCGACCCTCCAGGAATACGAACCGATATACACACCATTGAGCCTGTATTCTCAATCCAGCGTCTCAACAAGGGACAGCCTACAAAGATTGAATGAAATCAAAGAGAATTCCAACATCATGCACAGGTACGGACAGAGAGCTGATCAAGCCCACAGAGTGAGTTCCCCTCTACCCAGTAAGTCCGTAGACGACTCCCTCGTCAAACAGAAGAGACACAGACGAGTCAAAAGCATTGGCGATATTAACGCTTCCAGTAAAACTTCTGTTTAG

Protein

MALVRRILGDAQAKLRKMVDEQVSVGTRVDADPEPEPADPLITPASSVLDRSDLDHRPIPPERRLLIGTLDKPRNGSLNADKDAGTLNRTTRLAIRNGKDNPFIDDDNKENQANGKLDSPVKWSTQNGSDSGTYAEIGNGSNSNERNILDPADSSEEEVPLPDATSPGRSSDGPEPRADITATLEEAASPGARSDRSRQEEIPASPGMLTGAQLARRLRMENERLQAELTRVRRLLVAAAERGEAGNALLERTKDDESQETIALDPQQLEKELLLAREAVNSLKADKKRLKAEKFDLLNQMKQLYATLEDKEKELRDFIRNYEQMRSRGGASSALGAERAERERERAALLRHARDEAERSLQLAAALSARDTQLRHAREQLFEARRQLQAAGCLSEGESVASLGIGPPMLLGGPTGLIGDRGSCSADSGVRGSSDGGATSVCGGNLSDSTAEGLPPTIDSYDTDGASLVSSAHHIYQLGTPRDCSPTVSPHNSGSPFTRSIDAGSLSRSVEQLSSPGECEAALVGGLRGRSGGSAGSKGARGRGSAWGSISRVFARSRHRTKSGSAAVSGHESEPVYAGTGSTTRAWSPLSSEAALREAASQPLARWRTPAIIAWLELALGMPQYAAAIADNVKSGKVLLELTDADLEVGLGISQPMHRKKLRLAIEERRRPDLVRNPTIGQLSHAWVAAEWLPDLGLSQYAESFLANLVDARMLDTISKKELEKYLGVTRKFHQASIVHGIHLLRIMKYDRQALAVRRHQCENVDADPLVWTNHRFMRWAHNIDLGEFADNLKDSGVHGGLVVLEPSFTGETMATALGIPPSKSIIRRHLVAEFDALVIPARNMFGHQIRILGRPFSRSVATGLPGIDLSGESRRHSLRGSITRALGVLKPKHERTSPSSSSESSSVLSLGTQSYSYSPPVAVRTLSQLSMQYAPPPTLQEYEPIYTPLSLYSQSSVSTRDSLQRLNEIKENSNIMHRYGQRADQAHRVSSPLPSKSVDDSLVKQKRHRRVKSIGDINASSKTSV

Uniprot

H9J745 A0A2W1BTL6 A0A194QT38 A0A194PNR0 A0A212EW81 A0A2H1VBL0 + More
D6WE19 A0A139WKV9 A0A1B6DCS0 A0A1B6DRD9 A0A1W4XC35 U4UKI7 A0A0C9RT71

Pubmed

19121390 28756777 26354079 22118469 18362917 19820115 + More
23537049

EMBL

BABH01013877 BABH01013878 KZ149904 PZC78408.1 KQ461154 KPJ08484.1 + More
KQ459599 KPI94379.1 AGBW02012053 OWR45758.1 ODYU01001499 SOQ37792.1 KQ971324 EFA01373.2 KYB28546.1 GEDC01013830 JAS23468.1 GEDC01009063 JAS28235.1 KB632366 ERL93632.1 GBYB01011900 JAG81667.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151 UP000007266 UP000192223 + More
UP000030742

PRIDE

H9J745

Pfam

PF00536 SAM_1 + More
PF07647 SAM_2

Interpro

IPR001660   SAM        + More
IPR037614   Kazrin
IPR013761   SAM/pointed_sf
IPR037616   Kazrin_SAM_rpt_3
IPR037615   Kazrin_SAM_rpt_2

SUPFAM

SSF47769 SSF47769

Gene 3D

1.10.150.50

CDD

cd09570 SAM_kazrin_repeat3
cd09567 SAM_kazrin_repeat2

ProteinModelPortal

H9J745 A0A2W1BTL6 A0A194QT38 A0A194PNR0 A0A212EW81 A0A2H1VBL0 + More
D6WE19 A0A139WKV9 A0A1B6DCS0 A0A1B6DRD9 A0A1W4XC35 U4UKI7 A0A0C9RT71

PDB

3TAD E-value=9.95279e-49, Score=492

KEGG

101746495 no KO assigned | (RefSeq) kazrin

GO

GO:0005515 GO:0015074 GO:0004190 GO:0006508 GO:0004842 GO:0008565 GO:0015031 GO:0016020 GO:0016742 GO:0003824

PANTHER

PTHR12776

Length:

1026

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00159

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1 - 1026

Pi

220.615171

Theta

180.391253

Tajima's D

0.780973

CLR

0.150749

CSRT

0.595670216489176

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics