Silkworm Genome Informatics Database

Gene

KWMTBOMO04555

Pre Gene Modal

BGIBMGA005470

Annotation

PREDICTED:_protein_suppressor_of_sable_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr8(+):9630807-9636908 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.504

CDS

ATGGCACAATCTACAACTAACTACGACGACCTTGAAGATGGAGAGATTGAAAGTGGAGATGAGGAAAGTACTGAAACTCAAAATGTTGATATTATCAATGAAAATTCATCTAAGCTTGAAGAAAAATCTAAAGAAAGCCTTGAAACTCAGGATCAATATTATTCAAAATCAGGTAAGAAAAAGAGATCAAAATCCAACAAAGATCATAAGTCTAAGGATAAAAGCAAAAAGAATCGCAGGTATAGTAGTCCTGTAGAGGATGACTTTGCTAGTAATATCGAGAAAGCAATTAGAAAGGCTATGAATAAAAATGAAGCCGAAGACGATCAATCTAGGTTAGACGAGGATCGTCGTCGATACAAAAAAAGGAAGAAACATGATACAAAAGAAGGTTCTAGTAAAAAACGTAAGAAACAAGAGTATTCCGATGAAATGGACGAGAGTGAAATGATGTGTGTGAGAGGTGCATCCCCCGTACAGAAACAGTCTCCGGTTGAAGCATATGAAGAAGATGACAGAGATTCTTATGCTTCAGACAGCAGTCATGAATCGCGCGGTCATCAACATCGTCAACAAAGGCAAAAACACCAACAAAGAGATCGATTTAAAAATGATAGAGGTAAAAATGAAAAAAGAAGGGCGGCACATTCGATGCAGGATACAGACGGAGTTTGTTTGTATTATATGCAGGGAAAATGCCATAAAGGAGATGATTGCATTTATTCGCACGATGTTCATCCTCCACGGAAAATGGAACTTTGCAAATTTTATTTAATGGATTGTTGTGCTAAAAGAGATAAATGTCTTTATATGCACGCGGATTTTCCTTGTAAATATTATCACACTGGTCTTCCTTGTATTTACAAAGATGATTGTAAATTTGCCCATGGTAAACCATTGACTGAAAGCTTAAAAAATATTCTTTTAAAACACATAGAATCGGCGCCCAAAGAGATTTTAGGTGATTTTCCCCGACTAAATCGAGAAGGAGCTCTGAAAATGTTACAAGCTACGCAAGCAAAACTCAAACAGGAATATCCTGACTTTATGGAAAGTCAAGAAAAAACTATTCCTTCGTTGTTTGAATTAAGTATTCCGAACCCTCAATGTTCTGATTTTTCTGTAAACCAATCCAATAATGAGAAGCAAAATAAAATATCGCCTAAAGTACGACAGTCAAGGTGGCAAAATGATAATTCTAAACAGAATTATAATGACAGCATGTCTCCAAGTAATACTATCAACAATACAAATGTCTTAAGTTTGAAAAACCTCAATGGTGTATTAACGCCGCGACAAATATCTGACCTAATCAAAATGGGTATTGAAAATTTAGATCAACTTGGACAATTAACTGTTTTGCAGCTAAATACAATAGGTCTTTCGTTAAAACAAATAACCGAAATTCAACTAAACACAATGAGTATTCAAAAATTAGGATTAATAAATAATTCAAATGACAGTCAATCTAATTTGTTAGGATCCGCTGCGGCGAATAAAGATCTGGATTTAAGAGTACCACCTGTAATTCCCGTATCTAGTAATAATTCTATCCAGACTGACCTTCCAGGAAAAGACGTAGACATGCGTGTTCAACATTCAATATCAATTCTGCAAACCGAAGATATTAACGATAGAGTTGAAACCTCAAAAGAATTGGGAATAAGTAAAGATACAATTGATATCGATCAATATACAAAAGATGCCTTAAAATTTGCTAGTAAAGATAAGGAGAACATTGATATTTCAAACGAACCGTTCGAAAACAATAAAGCCGTATCCAGCGAATCAAAGGATGTAGATCACAGAGTGTTACCGTTTGTGGAAGAGACACCAAGGTTAATTTTGTCAAATACAGACGGGGCGTCTTTAAAACGAGAGTGTGATACAGACATAAGATTTCTTCATCCGGAACCATTATTTAAAAATCCCGAAAAAAGGCATCGTCGTTCAACTACTGATGATGACGATGACAATAATTTATTAATAGACGAAAAATGGTACTCCAGCGACGAAGAAAAAGCTGGTAAAAAGAAATCGCCATTGATGTCTCCACAAGCGTCTCAATCTCCACAAAATCCTGCACCACACGTTATAGAACCATCAGCTGTTCTAAATAGAATCGGAGATTTATCAAAAATAGATATTAGCGAAGAAGTCACAAAATTACTTAACACAATGAAAAATAATTTACAGGATACGAAAAATGAAAATTGTATCAGTGGTATTAGCTCGCCAAAGTCACGTGATCCTCGTTCTAGGAAATCTCCAGACAAAGCGCTGGAAAATTTGAAAAAGTTGGGCAGTAAAAAACCATCAAGAGTTTCAATTTATGAATGTGTTGACGGGGAGCCTACGGATGGACGTCGGCGCACGGATGTTGATTTACGTAACCCGGATATGAGTCTTCCTGCATTTGGAGACACAGATTTACGCCAGAGCTCCAGTGGTGACATTGATTTCCGTTTAGGATTACCATTTAAGCCTTTGCCAAATTATACACCTGCATCAGAAATAAATGCATCTATAAATTGTCATCCTCCGATTCCTTATAAATTAGTAACGGTTTATATACCTCGACCAGATTATTCGGATATAAAAAATAGTACGGCGAAATCACAAGCACTTGTTGATCCTAGGTTAAGAAAAGTTTTTAGGCTATCGACAGAAGAGACTAATAGTGATTCCGAAAAAACGTCAACTAAAGCGTTAAGTGCGACAGGGCCTAGGATTGATCCCCGCCGGAAGCCCAAAGAAAGCAACGAGGATCAAAAAGTTGTGACATTGGACTTACAAACCATTTTACAAAATTCAAACTGGTACAAAGAGTTAAGTTCCACTCAGAAAATATTTGTCAATCAACATTTAGTACCCGTAACTCAGATGATCAAACAGTTCCACCAAGAAAATGTTACAGGCAAAAAAATTGATCTCTCTTTTATACAAAGCAATTCGATTTTATGCAATATTTTTACTAATTTAGGTATTACTTTGGGTGATAATGGAGAGTATTCATATCTACCAAAACCCAAAGAAGCTTTACTGAAGACTCCGTCTAATATTAATCAGAATACGAATCCTTTCGGTTTAAATTCTAATATGCAATCGGGTCCGATAGACGGTGGTATGAATATAATGAACATTCCCCCAATGGGAATGGGTGGTATTAACAATATGAATAACATGAATAATATGAACAACATGAATAGCATGAATAACCTGAATAATATGAATTTAGGAAACATGCATGGGTTCACGGACCCCCGCGGCGGTCCTACTCCTGGACTACTCGGAATAGCTCCAAATATACCTCATAACTTCAATGCCAGTAATTATGGTGGACCAAACAATTACGGGAACATGCCGTTTAACGGACCCGGCTCGGGTAATGACTTTAACTTTGTCGACAGCGAACAAAATTATCCCAGATTTCCGAACAGAGGGGGGCATCGCGGTCGCGGAAACGATCGGTGGAATCGAGGGGGCCCAGGTAGAGGGAACCGAGACAGAAAGAATTTCAACGATCGTGGTAATTGGAAAAATGATAGGAATTAA

Protein

MAQSTTNYDDLEDGEIESGDEESTETQNVDIINENSSKLEEKSKESLETQDQYYSKSGKKKRSKSNKDHKSKDKSKKNRRYSSPVEDDFASNIEKAIRKAMNKNEAEDDQSRLDEDRRRYKKRKKHDTKEGSSKKRKKQEYSDEMDESEMMCVRGASPVQKQSPVEAYEEDDRDSYASDSSHESRGHQHRQQRQKHQQRDRFKNDRGKNEKRRAAHSMQDTDGVCLYYMQGKCHKGDDCIYSHDVHPPRKMELCKFYLMDCCAKRDKCLYMHADFPCKYYHTGLPCIYKDDCKFAHGKPLTESLKNILLKHIESAPKEILGDFPRLNREGALKMLQATQAKLKQEYPDFMESQEKTIPSLFELSIPNPQCSDFSVNQSNNEKQNKISPKVRQSRWQNDNSKQNYNDSMSPSNTINNTNVLSLKNLNGVLTPRQISDLIKMGIENLDQLGQLTVLQLNTIGLSLKQITEIQLNTMSIQKLGLINNSNDSQSNLLGSAAANKDLDLRVPPVIPVSSNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKDVDHRVLPFVEETPRLILSNTDGASLKRECDTDIRFLHPEPLFKNPEKRHRRSTTDDDDDNNLLIDEKWYSSDEEKAGKKKSPLMSPQASQSPQNPAPHVIEPSAVLNRIGDLSKIDISEEVTKLLNTMKNNLQDTKNENCISGISSPKSRDPRSRKSPDKALENLKKLGSKKPSRVSIYECVDGEPTDGRRRTDVDLRNPDMSLPAFGDTDLRQSSSGDIDFRLGLPFKPLPNYTPASEINASINCHPPIPYKLVTVYIPRPDYSDIKNSTAKSQALVDPRLRKVFRLSTEETNSDSEKTSTKALSATGPRIDPRRKPKESNEDQKVVTLDLQTILQNSNWYKELSSTQKIFVNQHLVPVTQMIKQFHQENVTGKKIDLSFIQSNSILCNIFTNLGITLGDNGEYSYLPKPKEALLKTPSNINQNTNPFGLNSNMQSGPIDGGMNIMNIPPMGMGGINNMNNMNNMNNMNSMNNLNNMNLGNMHGFTDPRGGPTPGLLGIAPNIPHNFNASNYGGPNNYGNMPFNGPGSGNDFNFVDSEQNYPRFPNRGGHRGRGNDRWNRGGPGRGNRDRKNFNDRGNWKNDRN

Uniprot

H9J7H8 A0A2H1UZU9 A0A2W1BXN6 A0A212F482 A0A1E1VZT9 A0A1E1VY95 + More
A0A0L7LUD7 A0A194PLS0 A0A1W4X5D6 A0A0T6B7X9

Pubmed

19121390 28756777 22118469 26227816 26354079

EMBL

BABH01013862 ODYU01000039 SOQ34138.1 KZ149904 PZC78404.1 AGBW02010434 + More
OWR48523.1 GDQN01010807 JAT80247.1 GDQN01011364 JAT79690.1 JTDY01000068 KOB79057.1 KQ459599 KPI94381.1 LJIG01009271 KRT83414.1

Proteomes

UP000005204 UP000007151 UP000037510 UP000053268 UP000192223

PRIDE

H9J7H8

Interpro

IPR036855 Znf_CCCH_sf + More
IPR000571 Znf_CCCH

SUPFAM

SSF90229 SSF90229

ProteinModelPortal

H9J7H8 A0A2H1UZU9 A0A2W1BXN6 A0A212F482 A0A1E1VZT9 A0A1E1VY95 + More
A0A0L7LUD7 A0A194PLS0 A0A1W4X5D6 A0A0T6B7X9

PDB

2CQE E-value=2.31996e-13, Score=188

KEGG

101746214 no KO assigned | (RefSeq) protein suppressor of sable

GO

GO:0046872 GO:0000151 GO:0006511 GO:0016567 GO:0004842 GO:0008565 GO:0015031 GO:0016020 GO:0016742 GO:0003824

Length:

1184

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04358

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1 - 1184

Pi

263.928065

Theta

199.944139

Tajima's D

-1.125423

CLR

137.595258

CSRT

0.113294335283236

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics