Gene

KWMTBOMO04553

Pre Gene Modal

BGIBMGA005339

Annotation

PREDICTED:_protein_FAM117B-like_isoform_X2_[Papilio_machaon]

Location

Bomo_Chr8(-):9603768-9609596      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.318

CDS

ATGTCGGGGCGAGTACGAAAGCAAACGGATTGTTCTGTGGGTAAGCAGGGCCCGATGCGGGCAACGCTGCCTGTGTCTTCGGTAATGAAGCAGAGCGGTGGTTTCAAGAAGAATACCAGCAACAGTCCGACTATGTCTCCCACGAATATGTGGCGTAGGATATCACCAGATCACGCCCTCTCAGGTCAAAGGAGTCCTGGTGCTATAAATTACAAAGGCAAAGGTCGTTTTGGATCCAGTGTAATTCGACGGACAGCCTCCCTAGACACGCTTTATCATAAAGGGCAGTGGCCAAGGGATTATTACCTACATGCAGGACAGCTACAAGTAGACAAATCAACACAAACTGATGATGGTGGTGGAACATCAGGACGTTCATCCCGAGGATCCGATGATGACAAATTAGATAGATTTCTCCGAAGTCGTCTTCAGCGTCCATACAAACCATCAGCCTCAGGGGACTATTCTGTACATACAATGACTACAGCCTTATGGTCGCGCTTCGGTAGTGGCAATGTACCGCTTAGGGCAGCTCGTTCATCGGTCGAAGGCCTAAATCAAGAAATAGAAAGACTTGTGCTGTATCCAGCGAGTGGCACGCAAACCACACATTTGGATCGATTACGGGATAAAGTAACACCAGAAGGGCATAGGGCTCCCTTAGCTGAATTACTTCGTCGTTCTGTGAACACTCAAACCCCACACGACCTGAGCCATACTGCACATTCTTCAGGCGGCAGCGTTTGTTCATCTCCCGATCTCGATGGATCTAAGCTTGGTACTTCCCCCCAGATAAACCGCTTCTTAGCAAGGGAACCCCCTGACGGCTGTGAAAAGGTGAATCTGAAAGCCGGCGAAGGTGCATACACAGAAGCGATGTCTGTGATAAAGCCAGCCGTGGCTGGGTTCACGTTACGGCCGTCGCAGGGCTCCGCCTTCCAGCCGCTCCAGCCGGCGCCGCACCATTACCCGCACACGCACTGA

Protein

MSGRVRKQTDCSVGKQGPMRATLPVSSVMKQSGGFKKNTSNSPTMSPTNMWRRISPDHALSGQRSPGAINYKGKGRFGSSVIRRTASLDTLYHKGQWPRDYYLHAGQLQVDKSTQTDDGGGTSGRSSRGSDDDKLDRFLRSRLQRPYKPSASGDYSVHTMTTALWSRFGSGNVPLRAARSSVEGLNQEIERLVLYPASGTQTTHLDRLRDKVTPEGHRAPLAELLRRSVNTQTPHDLSHTAHSSGGSVCSSPDLDGSKLGTSPQINRFLAREPPDGCEKVNLKAGEGAYTEAMSVIKPAVAGFTLRPSQGSAFQPLQPAPHHYPHTH

Uniprot

H9J747   A0A194PN12   A0A2W1BTJ5   S4P8H5   A0A194QT33   A0A3S2LW58   + More
A0A2H1V026   A0A212F466   A0A2A4J078   A0A067RH99   A0A2A3EJS3   A0A0C9RK82   A0A1Y1KA56   E2ACM1   A0A087ZQ87   A0A0C9Q093   A0A0N0BHE8   A0A151XG04   F4WAU8   A0A158P3L2   A0A151IH86   A0A1W4W8B0   A0A1W4WJK5   A0A1W4WIL3   A0A1Y1K9V9   A0A026WT05   A0A1B6HY80   A0A151ITH9   A0A310SHH4   A0A146MEK2   A0A1B6DMH8   A0A0A9YLJ7   A0A0L7R450   A0A0K8TLK6   Q17L07   A0A1S4EYZ8   E2BNV3   A0A023EX17   A0A182IUI0   U5ERC3   A0A084VYW4   A0A224XPH6   A0A1Q3G0G4   A0A182Y611   A0A182WES0   A0A069DTF9   A0A182RY25   A0A182M5L3   A0A182Q3W8   A0A2R7VYT8   K7IRM5   A0A182MXR3   A0A1B0CL71   A0A1Q3G0G8   A0A1L8DCC0   A0A3L8DHW9   A0A1L8DCS0   A0A293N2V7   A0A2R5LFW8   A0A131XVM8   A0A232EYW1   A0A1E1XP66   T1JD76   A0A1E1XHS5   A0A0P4VY09   A0A0P4VVT7   A0A210PU28  

Pubmed

19121390    26354079    28756777    23622113    22118469    24845553    + More
28004739    20798317    21719571    21347285    24508170    26823975    25401762    26369729    17510324    25474469    24438588    25244985    26334808    20075255    30249741    28648823    29209593    28503490    28812685   

EMBL

BABH01013859    KQ459599    KPI94383.1    KZ149904    PZC78402.1    GAIX01004199    + More
JAA88361.1    KQ461154    KPJ08479.1    RSAL01000163    RVE45347.1    ODYU01000039    SOQ34136.1    AGBW02010434    OWR48525.1    NWSH01004628    PCG64840.1    KK852507    KDR22423.1    KZ288229    PBC31724.1    GBYB01007246    GBYB01007247    JAG77013.1    JAG77014.1    GEZM01088359    JAV58244.1    GL438568    EFN68765.1    GBYB01007248    JAG77015.1    KQ435756    KOX75914.1    KQ982174    KYQ59313.1    GL888053    EGI68704.1    ADTU01008197    ADTU01008198    KQ977636    KYN01155.1    GEZM01088360    JAV58243.1    KK107109    EZA59132.1    GECU01028092    JAS79614.1    KQ981039    KYN10145.1    KQ759887    OAD62127.1    GDHC01001473    JAQ17156.1    GEDC01010446    JAS26852.1    GBHO01009662    GBRD01014192    JAG33942.1    JAG51634.1    KQ414658    KOC65665.1    GDAI01002567    JAI15036.1    CH477220    EAT47348.1    GL449507    EFN82636.1    GBBI01004964    JAC13748.1    GANO01003813    JAB56058.1    ATLV01018507    KE525236    KFB43158.1    GFTR01005964    JAW10462.1    GFDL01001750    JAV33295.1    GBGD01001659    JAC87230.1    AXCM01001835    AXCN02002307    KK854092    PTY11115.1    AJWK01016981    AJWK01016982    AJWK01016983    GFDL01001744    JAV33301.1    GFDF01009971    JAV04113.1    QOIP01000008    RLU19792.1    GFDF01009970    JAV04114.1    GFWV01020997    MAA45725.1    GGLE01004290    MBY08416.1    GEFM01006165    JAP69631.1    NNAY01001573    OXU23551.1    GFAA01002568    JAU00867.1    JH432100    GFAC01000425    JAT98763.1    GDRN01104665    JAI57874.1    GDRN01104664    JAI57875.1    NEDP02005493    OWF40010.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000283053    UP000007151    UP000218220    + More
UP000027135    UP000242457    UP000000311    UP000005203    UP000053105    UP000075809    UP000007755    UP000005205    UP000078542    UP000192223    UP000053097    UP000078492    UP000053825    UP000008820    UP000008237    UP000075880    UP000030765    UP000076408    UP000075920    UP000075900    UP000075883    UP000075886    UP000002358    UP000075884    UP000092461    UP000279307    UP000215335    UP000242188   

PRIDE

H9J747   

Pfam

PF15388   FAM117        + More
PF01436   NHL
PF00630   Filamin
PF13639   zf-RING_2

Interpro

IPR026642   Glcci1/FAM117        + More
IPR014756   Ig_E-set       
IPR000315   Znf_B-box       
IPR001841   Znf_RING       
IPR013783   Ig-like_fold       
IPR001298   Filamin/ABP280_rpt       
IPR013017   NHL_repeat_subgr       
IPR011042   6-blade_b-propeller_TolB-like       
IPR013083   Znf_RING/FYVE/PHD       
IPR001258   NHL_repeat       
IPR017907   Znf_RING_CS       
IPR017868   Filamin/ABP280_repeat-like       

SUPFAM

SSF81296   SSF81296       

Gene 3D

2.120.10.30     2.60.40.10     3.30.40.10    

CDD

cd00021  BBOX

ProteinModelPortal

H9J747   A0A194PN12   A0A2W1BTJ5   S4P8H5   A0A194QT33   A0A3S2LW58   + More
A0A2H1V026   A0A212F466   A0A2A4J078   A0A067RH99   A0A2A3EJS3   A0A0C9RK82   A0A1Y1KA56   E2ACM1   A0A087ZQ87   A0A0C9Q093   A0A0N0BHE8   A0A151XG04   F4WAU8   A0A158P3L2   A0A151IH86   A0A1W4W8B0   A0A1W4WJK5   A0A1W4WIL3   A0A1Y1K9V9   A0A026WT05   A0A1B6HY80   A0A151ITH9   A0A310SHH4   A0A146MEK2   A0A1B6DMH8   A0A0A9YLJ7   A0A0L7R450   A0A0K8TLK6   Q17L07   A0A1S4EYZ8   E2BNV3   A0A023EX17   A0A182IUI0   U5ERC3   A0A084VYW4   A0A224XPH6   A0A1Q3G0G4   A0A182Y611   A0A182WES0   A0A069DTF9   A0A182RY25   A0A182M5L3   A0A182Q3W8   A0A2R7VYT8   K7IRM5   A0A182MXR3   A0A1B0CL71   A0A1Q3G0G8   A0A1L8DCC0   A0A3L8DHW9   A0A1L8DCS0   A0A293N2V7   A0A2R5LFW8   A0A131XVM8   A0A232EYW1   A0A1E1XP66   T1JD76   A0A1E1XHS5   A0A0P4VY09   A0A0P4VVT7   A0A210PU28  

KEGG

101740887    no KO assigned | (RefSeq) protein FAM117B-like

GO

GO:0008270  

PANTHER

PTHR14972  

Length:

327

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00238

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.10402

outside

1  -  327

 

 

Pi

229.383176

Theta

177.288507

Tajima's D

1.337057

CLR

0.11741

CSRT

0.745062746862657

Interpretation

Uncertain