Silkworm Genome Informatics Database

Gene

KWMTBOMO04551

Pre Gene Modal

BGIBMGA007859

Annotation

PREDICTED:_extensin-3-like_[Bombyx_mori]

Location

Bomo_Chr8(+):9592747-9593450 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.258

CDS

ATGTATTTTGAAATCAACCCCCCACCTAGGGTATCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTCCGCTCAACCCTCCACCTAGGGTATTTCCATCGTCTCTTTCCATCTCTCCTGAAACTTTCGGTTACCACTATTAG

Protein

MYFEINPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFIPLNPPPRVFPSSLSISPETFGYHY

Uniprot

H9JEB2 H9JIS1 A0A2N9HNU4 A0A2N9G7R1 A0A2N9IZF2 A0A2N9HZP1 + More
A0A2N9FAH1 A0A2G6EX49 D6WXA3 D6WXA4

Pubmed

19121390 18362917 19820115

EMBL

BABH01002849 BABH01032934 OIVN01003766 SPD13413.1 OIVN01001552 SPC95231.1 + More
OIVN01006274 SPD29533.1 OIVN01004414 SPD17210.1 OIVN01000692 SPC84193.1 PDQA01000016 PID66665.1 KQ971361 EFA08013.1 EFA08012.1

Proteomes

UP000005204 UP000007266

PRIDE

H9JEB2 H9JIS1

Pfam

PF00092 VWA

Interpro

IPR002035 VWF_A + More
IPR036465 vWFA_dom_sf

SUPFAM

SSF53300 SSF53300

Gene 3D

3.40.50.410

ProteinModelPortal

H9JEB2 H9JIS1 A0A2N9HNU4 A0A2N9G7R1 A0A2N9IZF2 A0A2N9HZP1 + More
A0A2N9FAH1 A0A2G6EX49 D6WXA3 D6WXA4

KEGG

105841523 no KO assigned | (RefSeq) extensin-3-like

GO

Length:

150

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00035

Exp number, first 60 AAs:

0.00035

Total prob of N-in:

0.05525

outside

1 - 150

Pi

207.829595

Theta

173.859417

Tajima's D

0.614655

CLR

107.553155

CSRT

0.544072796360182

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree