SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04551
Pre Gene Modal
BGIBMGA007859
Annotation
PREDICTED:_extensin-3-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.258
 

Sequence

CDS
ATGTATTTTGAAATCAACCCCCCACCTAGGGTATCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTCCGCTCAACCCTCCACCTAGGGTATTTCCATCGTCTCTTTCCATCTCTCCTGAAACTTTCGGTTACCACTATTAG
Protein
MYFEINPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFIPLNPPPRVFPSSLSISPETFGYHY

Summary

Pfam
PF00092   VWA
Interpro
IPR002035   VWF_A        + More
IPR036465   vWFA_dom_sf       
SUPFAM
SSF53300   SSF53300       
Gene 3D

Ontologies

GO

Topology

Length:
150
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00035
Exp number, first 60 AAs:
0.00035
Total prob of N-in:
0.05525
outside
1  -  150
 
 

Population Genetic Test Statistics

Pi
207.829595
Theta
173.859417
Tajima's D
0.614655
CLR
107.553155
CSRT
0.544072796360182
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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