Silkworm Genome Informatics Database

Gene

KWMTBOMO04548

Pre Gene Modal

BGIBMGA005341

Annotation

PREDICTED:_uncharacterized_protein_LOC101740157_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr8(-):9504936-9506906 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.134

CDS

ATGCCGCTAAAAACGGAAGTAAAGACAAATGTTTATATGCTTCGTATAGGCATGTCATTAGACGAAGGCAGACAATCACAAAGGCCATACAGGTATGGCATGGTGTTGTTATGTGCGGGAGCGCTAATCAACTGGCTGGGTCTGGCTGAAGACTACGCGGAACCGGTGCGATATGTGGGCGTGGCGTGCATCGTCGCCGGAGCACTACTCATCTGCGCGGCGATGTGTTGCTGGCTGCAATCTCCTGCTAGGCAGCCGCAAAACGAACGGGCTTCGACTGATACACATCAGATCGACGATCCCATTCACGTAATATCAATGCCAGACGAGGAGACGATGCAACAAAAGCCGCCAGACTACGACACTGTGGCGGGAGCACCGCCAACGTATGACGACGCCATCAAACTGAATCCAGCGCGACTGTTGCCGGCGTCGAGCAGCGCGCGCGGAGAGTCGGCCCGCAGTCCGATGCCAGGAGACGCACCTGTGATCCCAGGTCAACCTGATGACGCGCCACCGCCAGCGCCCGTGGTCGCACCAGTTCACCGCTCACAGATCCCGAAAACACCGCCGCCCCCGTACAATCCCACGCACGCGATCAGATGA

Protein

MPLKTEVKTNVYMLRIGMSLDEGRQSQRPYRYGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQPQNERASTDTHQIDDPIHVISMPDEETMQQKPPDYDTVAGAPPTYDDAIKLNPARLLPASSSARGESARSPMPGDAPVIPGQPDDAPPPAPVVAPVHRSQIPKTPPPPYNPTHAIR

Uniprot

H9J749 A0A2W1BTQ5 A0A212F468 A0A3S2N9W6 A0A2H1X4R7 S4PCT6 + More
A0A194PM33 A0A194QU05 I4DMK1 A0A1E1W1F8 A0A0L7L506 A0A195BCR9 E9I8C8 A0A195FMU2 A0A151XDW6 A0A1B6H8K0 A0A2R7WQM7

Pubmed

19121390 28756777 22118469 23622113 26354079 22651552 + More
26227816 21282665

EMBL

BABH01013849 KZ149904 PZC78399.1 AGBW02010434 OWR48527.1 RSAL01000163 + More
RVE45344.1 ODYU01013022 SOQ59634.1 GAIX01003986 JAA88574.1 KQ459599 KPI94387.1 KQ461154 KPJ08475.1 AK402519 BAM19141.1 GDQN01010229 JAT80825.1 JTDY01002990 KOB70359.1 KQ976513 KYM82353.1 GL761538 EFZ23186.1 KQ981430 KYN41721.1 KQ982254 KYQ58555.1 GECU01036678 JAS71028.1 KK855296 PTY21874.1

Proteomes

UP000005204 UP000007151 UP000283053 UP000053268 UP000053240 UP000037510 + More
UP000078540 UP000078541 UP000075809

PRIDE

H9J749

ProteinModelPortal

H9J749 A0A2W1BTQ5 A0A212F468 A0A3S2N9W6 A0A2H1X4R7 S4PCT6 + More
A0A194PM33 A0A194QU05 I4DMK1 A0A1E1W1F8 A0A0L7L506 A0A195BCR9 E9I8C8 A0A195FMU2 A0A151XDW6 A0A1B6H8K0 A0A2R7WQM7

KEGG

101740157 no KO assigned | (RefSeq) formin-like protein 3

GO

GO:0016021

Length:

201

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.07011

Exp number, first 60 AAs:

21.59987

Total prob of N-in:

0.95029

POSSIBLE N-term signal

sequence

inside

1 - 31

TMhelix

32 - 49

outside

50 - 58

TMhelix

59 - 81

inside

82 - 201

Pi

179.858505

Theta

125.406361

Tajima's D

-0.597142

CLR

0.579231

CSRT

0.220138993050347

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics