SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04546  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005468
Annotation
PREDICTED:_clustered_mitochondria_protein_homolog_[Amyelois_transitella]
Full name
Clustered mitochondria protein homolog       + More
Protein clueless      
Alternative Name
Clustered mitochondria protein homolog
Location in the cell
Nuclear   Reliability : 2.73
 

Sequence

CDS
ATGAAGAAAGATGTCTGCCCGAAGATGGCATCCGCCAGCAACGGTTATGCTAACAGTCTTAACGGCCGCGCTGATGACGAGGGTGGTGGCGAGAGTGGCACGCCGCGTGTTTCCTACGCGGCTGCCGCTCGTAAGCCAGTCTCGCCTCAGTCTAGTAACACTCCTGCATCTTTTACGCTAAATACAGAACACCAGAAGTCGAAGATCAATGTTGAAAAGGAATCACAACAAAAATTAATAAATTCTACAACAAACGTCAACGGTATGGCTTCAATATCAAACGATATTGAAATAAATAATTCTAAATTAACTATCAAAGAGCCAGCAGTAAATGGCACGGAAAAAAGCACTGAGACCATAATAAATGGCGATTCAAAAAACGTTTTAGATTGTGATACTAGAAGTAGTGATAATACTAAAGTAGTTGTAAACGGCAATAATAGTGATTCCGAAGAAACTAAATCTACGAAGTCGGAAGAAGATCTTAAAACTGTTATAGTAACAAAATGTCCAAATAAAACGGCCGTGATGGACAAAAAGAAAGAACACAAGAAGAACAGGTCTTTGGAAAAGTGCAATGACGCTGAAAAGAAGACTGCTCAAAACGTAGTGGAGGATAAAAAAGACAATAGTTCATCTGTTAATATAAATAATGCCATAGAAAAAAATAATAGTGATTCAAATAAAGTGGTTAATGGCGATAGAGATAGGGAGTCCTCGCCTAGTGAAGATGGCGATGAAAAGAAAAGGGATGCTGAGGTCGTGTTTATACAAGACTTGGGTTTTACGGTTAAAATCGTTAGCCCTGGAGCTGAACCATTGGATATACAAGTATCAAGTATGGAACTTGTACAAGAAATACATCAAGTACTGATGGATCGAGAAGATACATGTCATCGAACGTGCTTTTCACTGCAACTGGATGGAGTTACTTTGGATAATTTTGCCGAATTGAAGAATATTGAAGGGCTAAAAGAAGGTTCTGTTATTAAGGTGATGGAAGAGCCGTACACAATGCGAGAAGCGCGTATCCACGTTCGACATGTTAGAGATCTTCTGAAATCCATCGATTATACTGATGCTTATGCCGGTCAAGAGTGTAGTTCATTGGCTTTTCTGAACGTCATCACGCAAGGAGATATTTTAGAAAAGAAGAAATCTCGACCAGAAAGCGTGGACTGTACTCCTCCAGACTACATAATGCCGTCCAGCACGGAGCGTCCACTGTTGCCGCTACACCCGGGACTCACTAAAGAGAATAAGGCGCCGCAGTGTCTCAAAGTACTGACCACATCGGGCTGGAATCCTCCACCTGGTCCTAGGAAGATGTGCGGAGACCTTCTTTATTTACACGTGGTGACCCTTGAAGATCGACACTTCCACATAACGGCCTGCCCTAGGGGCTTCTACCTCAACCAATCCACCGAAGAAGTGTTCAATCCTCGACCAGCTAATCCGTCTTTACTTTGTCACTCGCTCATTGAACTCCTGAGCATCGTGTCGCCGGCCTTCAAACGGAACTTCGCGCTAGTACAAAAGCGGCGTATGCAGAAACATCCGTTCGAGAGGGTCGCCACACCATACCAGGTTTATCAGTGGGCCTCGCCTATGCTCGATCACACTGTTGACGCCATCCGTGCTGAAGACACATTTTCATCGAAATTGGGCTACGAAGAGCATATTCCTGGTCAAACCCGAGACTGGAATGAGGAGTTGCAGACAACGCGCGAGTTACCAAGGTCCACTTTACCCGAGCGACTTCTGCGTGAAAGAGCCATTTTTAAGGTCCACAGTGATTTCGTTGCTGCCGCGACTCGAGGAGCCATGGCTGTGGTCGATGGTAACGTGATGGCGATCAATCCAGGGGAAGAACCGAAGATGCAGATGTTCATCTGGAACAATATCTTCTTCTCGTTGGGCTTCGACGTACGCGATCACTACAAAGATTTGGGCGGAGATGCGGCGGCTTTTGTTGCTCCGCGCAATGACTTGCAAGGCGTTCGAGTGTACAGCGCAGTAGACACCCCGGGGCTGCACACCCTGGGCACGGTGGTGGTGGACTACCGCGGGTACCGGGTCACGGCTCAGTCCATCATCCCGGGAATACTGGAGAAGGAGCAAGAACAGAGCGTTGTATACGGCAGCATCGACTTTGGAACGACCGTACTCTCGCACCCTAAGTACATGGAACTGTTGAGCAAAGCTGGACAGCAGTTAAAGATAATGCCCCATTCAGTTATCAGTGCGAATGGCGAGGTGGTTGAGTTGTGCTCCAGCGTTGAATGCAAGGGAATTATAGGAAACGACGGACGTCATTACATTTTAGACTTGCTGCGCACTTTTCCACCGGATGTCAACTTTTTACAATTGGAAGATGACGAACTCAGAGAAGATATAAAATCCATGGGCTTCCCGATTATCCACAAGCACAAACTATGTTGTTTGAGACAGGAATTAGTCGATAGTTTTGTTGAGGCTCGTTATTTCATGTTCATTCGCTATGCCGCGTTCCACTTGCAACAGTTAAGCGCGAAGCGTCAGCGCGATCAGAATGATGATCAGAAGTCAATCGAACCGAACAAGGAAAGCGAAAAGAAAGATAATACAGACTCAGAGAAGAAGAAGAGAGACAATAAAAGCCAAGAGAAAGAGACCAAAGATAAAAAGAAAAAGGATGAATCTAGTAGTGTTAAAAAAGAAGAAAGTAAGAAAGAAATTGAATTAAATGATGTTAAGATTGAGAAAGGGAAAGATGATGAATTATTGTTGAACGACAACTATTCAGAAATAGACACGGATGTTGCCAAGAAAATTGTTGAAAGCATTACGGACTCAATTTGCAGCGGAGAGAAACAAGAGAATGACTCGGGCGAGCGTTCCCGCGCAGTGGTGGCGGCGGCGGCGCGCGCTGTGGCCTCGCTCAAGGAGTCGGAGTTCGACGTGCGCTTCAACCCGGACGTGTACTCCGCCGGCATCAAGCACGCCGCCGCGCCCGAGCACCTCGCCAAGCAACGGCACCTCGTCAAGGAAGCGGCCGCCTTCCTGCTCACCACGCAGATCCCGGCCTTCGTGCGGGAGTGCGTGGAGCAGAGCGTGGCGCCGATGGACGGCGCGGGGCTGACGGAGGCGCTGCACGCGCGCGGCATCAACGTGCGGTACCTGGGCCGCGTGGCGCTGGCCCTGGCTGCGCACCCCTCGCTGGCCTACCTGCACGCCATCGCGCTCGCCGACCTGCTGCTGCGCGCCGCCAAGCATCTCTACACGGCCTACTTGCAGGGTTGCGAGCCTATGTGCATCGGTTCAGCTGTAGCGCATTTCTTGAACTGTTTGTTGGGGGCGTGTCCGACGCCCGGCATCAGTCCGGCGGAGGGCGTGGCGGGGGGTCGGGGCGCGGGGCGCGGGGGTCGCGGGCGCCGCTCCCGCAAGCACGCGCACTCGCAGCCCGCCGCCTCGCCGCTCCCCGACTGGCAGAACCTCACGCCCAAATCGCTCTTTGCACAGATTAAACAAGAGTTGAAGGCGTATTGGGGATATGATCTTAATGCCGAGAACATGGAATCTATAATCGAAAAACACAGTATTCAGAAAATATCACTTCTCAGGTCCTTCGCACTAAAAGTAGGCTTGCAAGTTATGTTAAGAGAATACGACTTTGACAATAAAAACAAGGCACCGTTTGCAAGTGCGGACATTATGAATATTTTCCCCGTCGTTAAACATATCAATCCACGCGCTTCAGACGCATACAATTTCTACACGACGGGTCAGAACAAAATCCAAGCCGGCGCCGTGTCCGAAGGTCACGAACTGATCGCTGAGGCTCTGAACTTGCTGAACAACGTGTACGGCGCCATGCACGGCGAGATCGCGCAGTGCCTCCGCATGGTGGCGCGCCTGTGCTACGTCACCGGCGAGCACCGGGACGCCATGGCCTACCAGCAGAAGGCGGTGCTTATGTCCGAGAGGGTCAACGGCATTGATCACCCTTACACTATTACAGAATATTCACATTTGGCGTTATACTGCTTTGCCAACGGTCAAGTGAGCACCGCATTGAAGCTACTGTATCGAGCCCGCTACTTGGCATTGATCGTTTGCGGCGAAAACCACCCAGAGATGGCGCTGCTCGACAGCAACATCGCGCTGATCCTGCACGCGGTCGGCGAGTACGAGCTGTCGCTGCGGTTCGCGGAGCGCGGGCTGGCGGTGACGAGCGGCACGCACGGGCCGCGCTCGCTGAAGGCGGCCGTGGCGCGCCACCTGCTCGCGCGCACGCTCTCCTGCCTCGGCGACTTCCGGGCGGCGCTCGCGCACGAGAAGGAGACCTACTCTATCTATAAGCATCTGTTGGGCGAGAAGCACGAGAAGACGCGCGAGTCGTCGGAGTGTCTCCGTCACCTGACGCAGCAGGCGGTGGTGCTGCAGAAGCGGCTGGCGGAGGCGTACGCGCGCGCCCCGCACCACGCGCACCACGCGCCGCTGCACATCCAGCCGCCCGGCATGGCCTCCGTCATCGACATGCTCAACCTCATCAACGGTATACTCTTCGTGCAAATCAGCCCGCAAGACATCGAGCAGTTCAAAGCTGAGATAGAGAAAAGACAACTGAAGGATTTGCCCGTTCCTGGAACTCTGACCGATCTCGGCGGAGAAGTCGACGACGAGAAATCTAATTCCGGCGCGCCGTCCGCGAGCGGCGACACGAAGGAGGCGCCGGCCAGTTGA
Protein
MKKDVCPKMASASNGYANSLNGRADDEGGGESGTPRVSYAAAARKPVSPQSSNTPASFTLNTEHQKSKINVEKESQQKLINSTTNVNGMASISNDIEINNSKLTIKEPAVNGTEKSTETIINGDSKNVLDCDTRSSDNTKVVVNGNNSDSEETKSTKSEEDLKTVIVTKCPNKTAVMDKKKEHKKNRSLEKCNDAEKKTAQNVVEDKKDNSSSVNINNAIEKNNSDSNKVVNGDRDRESSPSEDGDEKKRDAEVVFIQDLGFTVKIVSPGAEPLDIQVSSMELVQEIHQVLMDREDTCHRTCFSLQLDGVTLDNFAELKNIEGLKEGSVIKVMEEPYTMREARIHVRHVRDLLKSIDYTDAYAGQECSSLAFLNVITQGDILEKKKSRPESVDCTPPDYIMPSSTERPLLPLHPGLTKENKAPQCLKVLTTSGWNPPPGPRKMCGDLLYLHVVTLEDRHFHITACPRGFYLNQSTEEVFNPRPANPSLLCHSLIELLSIVSPAFKRNFALVQKRRMQKHPFERVATPYQVYQWASPMLDHTVDAIRAEDTFSSKLGYEEHIPGQTRDWNEELQTTRELPRSTLPERLLRERAIFKVHSDFVAAATRGAMAVVDGNVMAINPGEEPKMQMFIWNNIFFSLGFDVRDHYKDLGGDAAAFVAPRNDLQGVRVYSAVDTPGLHTLGTVVVDYRGYRVTAQSIIPGILEKEQEQSVVYGSIDFGTTVLSHPKYMELLSKAGQQLKIMPHSVISANGEVVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLQLEDDELREDIKSMGFPIIHKHKLCCLRQELVDSFVEARYFMFIRYAAFHLQQLSAKRQRDQNDDQKSIEPNKESEKKDNTDSEKKKRDNKSQEKETKDKKKKDESSSVKKEESKKEIELNDVKIEKGKDDELLLNDNYSEIDTDVAKKIVESITDSICSGEKQENDSGERSRAVVAAAARAVASLKESEFDVRFNPDVYSAGIKHAAAPEHLAKQRHLVKEAAAFLLTTQIPAFVRECVEQSVAPMDGAGLTEALHARGINVRYLGRVALALAAHPSLAYLHAIALADLLLRAAKHLYTAYLQGCEPMCIGSAVAHFLNCLLGACPTPGISPAEGVAGGRGAGRGGRGRRSRKHAHSQPAASPLPDWQNLTPKSLFAQIKQELKAYWGYDLNAENMESIIEKHSIQKISLLRSFALKVGLQVMLREYDFDNKNKAPFASADIMNIFPVVKHINPRASDAYNFYTTGQNKIQAGAVSEGHELIAEALNLLNNVYGAMHGEIAQCLRMVARLCYVTGEHRDAMAYQQKAVLMSERVNGIDHPYTITEYSHLALYCFANGQVSTALKLLYRARYLALIVCGENHPEMALLDSNIALILHAVGEYELSLRFAERGLAVTSGTHGPRSLKAAVARHLLARTLSCLGDFRAALAHEKETYSIYKHLLGEKHEKTRESSECLRHLTQQAVVLQKRLAEAYARAPHHAHHAPLHIQPPGMASVIDMLNLINGILFVQISPQDIEQFKAEIEKRQLKDLPVPGTLTDLGGEVDDEKSNSGAPSASGDTKEAPAS

Summary

Description
mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria.
Similarity
Belongs to the CLU family.
Keywords
Complete proteome   Cytoplasm   Reference proteome   Repeat   TPR repeat   Phosphoprotein  
Feature
chain  Clustered mitochondria protein homolog
EMBL
BABH01013845    BABH01013846    BABH01013847    BABH01013848    KZ149904    PZC78397.1    + More
RSAL01000036    RVE51305.1    AGBW02013261    OWR43803.1    KK853109    KDR11240.1    GEDC01031026    JAS06272.1    GEDC01004439    JAS32859.1    GEBQ01014076    JAT25901.1    GEBQ01027081    JAT12896.1    GEBQ01028876    JAT11101.1    KQ971318    EFA00454.1    GL438827    EFN68271.1    GL766526    EFZ15097.1    QOIP01000010    RLU17475.1    LBMM01003605    KMQ93329.1    ACPB03000369    ACPB03000370    ACPB03000371    ACPB03000372    GL448783    EFN83849.1    GECL01002414    JAP03710.1    GFTR01008724    JAW07702.1    KQ414632    KOC67121.1    GBBI01002325    JAC16387.1    ADTU01013696    ADTU01013697    KZ288232    PBC31528.1    NNAY01000187    OXU30173.1    GDKW01002045    JAI54550.1    KK107455    EZA50535.1    DS235773    EEB16805.1    GEZM01012263    JAV93031.1    KQ435922    KOX68642.1    GDIP01035287    JAM68428.1    GDIQ01137966    JAL13760.1    GL732545    EFX80971.1    LRGB01000024    KZS21814.1    CVRI01000047    CRK98177.1    GDIQ01149420    JAL02306.1    GDIP01048234    JAM55481.1    ABLF02034686    GFXV01002249    MBW14054.1    CH477201    GDIP01042983    JAM60732.1    KK118574    KFM73307.1    JXUM01147461    KQ570372    KXJ68378.1    DS231828    GDIQ01033510    JAN61227.1    UFQT01000661    SSX26248.1    GDIQ01111764    JAL39962.1    SSX26247.1    GDIP01207515    JAJ15887.1    GFDL01012168    JAV22877.1    GFDL01012068    JAV22977.1    GFDL01012059    JAV22986.1    GDIQ01232882    JAK18843.1    KB631604    ERL84600.1    APGK01057365    KB741280    ENN70880.1    GDIP01210061    JAJ13341.1    KQ982080    KYQ60186.1    GFDF01004815    JAV09269.1    JH431506    GDIQ01021315    JAN73422.1    GGFL01006327    MBW70505.1    GANO01001749    JAB58122.1    GGFK01002993    MBW36314.1    GGFK01002951    MBW36272.1    GGFJ01000416    MBW49557.1    ADMH02000368    ETN66807.1    HACA01002852    CDW20213.1    AXCM01006955    GDIQ01230927    JAK20798.1    GGFL01006317    MBW70495.1    GDIQ01230928    JAK20797.1    KA646272    AFP60901.1    GDIQ01230929    JAK20796.1    GDIQ01230926    JAK20799.1    AAAB01008986    AXCN02001095    ATLV01023945    KE525347    KFB50116.1    JXJN01021060    JXJN01024363    APCN01002408    CAEY01000798    GEFH01000969    JAP67612.1    GEDV01010187    JAP78370.1    CM000071    CH479181    OUUW01000001    SPP74730.1    KRT01854.1   
Pfam
PF15044   CLU_N        + More
PF13236   CLU
PF12807   eIF3_p135
PF05303   DUF727
PF00379   Chitin_bind_4
PF07851   TMPIT
PF07776   zf-AD
PF00096   zf-C2H2
PF18031   UCH_C
PF01088   Peptidase_C12
Interpro
IPR027523   CLU        + More
IPR011990   TPR-like_helical_dom_sf       
IPR028275   CLU_N       
IPR033646   CLU-central       
IPR025697   CLU_dom       
IPR023231   GSKIP_dom_sf       
IPR007967   GSKIP_dom       
IPR013026   TPR-contain_dom       
IPR031311   CHIT_BIND_RR_consensus       
IPR000618   Insect_cuticle       
IPR012926   TMPIT       
IPR019734   TPR_repeat       
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR036959   Peptidase_C12_UCH_sf       
IPR001578   Peptidase_C12_UCH       
IPR038765   Papain-like_cys_pep_sf       
IPR041507   UCH_C       
SUPFAM
SSF48452   SSF48452        + More
SSF57667   SSF57667       
SSF54001   SSF54001       
Gene 3D
PDB
6FV0     E-value=9.71288e-07,     Score=132

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
1574
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11136
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  1574
 
 

Population Genetic Test Statistics

Pi
241.187358
Theta
175.270601
Tajima's D
1.027187
CLR
0.344062
CSRT
0.671116444177791
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 APFAPAPIIAPR 100.00 2e-04
25044914 ASAYDFFK 100.00 0.003
28467696 ASDAAWYQCTAQNVAGSTATR 100.00 0.003
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