SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04542
Pre Gene Modal
BGIBMGA005343
Annotation
PREDICTED:_protein_phosphatase_PTC7_homolog_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 0.633
 

Sequence

CDS
ATGCAGTCAATTTTCTGGACAGGCAGATTGCTCTCACGTGCTCTACGCAATGGACTCGCGAGTATTTCTAGTGCAGCAGAATTAAATGTTTTCAATAAGAAGCATCCTTATTTAGTTTCAGTGGTTTGTGGTTTTCCTAAAGACATTGCCAATGGGCGAACTCGTAAAGGACAGTTTGGTGACGACGCTTGGTTTGCAACTAACTTTCAAAATGCAGATGTAATTGGTGTTGCAGATGGAGTTGGTGGCTGGCGAGCATATGGAATTGATCCTGGTGAATTCTCATCATATCTCATGCGAACCTGTGAGAGACTAGTCCAAATGGGTCATTTTAAGTTGTCAGAACCTGGAGACTTGCTAGCCAAATCCTATTATGAGCTATTAGAACACAAGAAACCAATATTAGGTAGTAGTACAGCGTGCGTCATGATTTTGGATCGCAACGAGAGCTTAATGCGAGCAGCAAACATTGGCGATAGCGGTTACATGGTTGTGCGAGGCGGCCGTGTCGTCTATCGCTCACACGAACAACAGCACTATTTTAATACGCCATACCAATTGAGTTTACCGCCTCCGGGACACGACAGGAACGTCCTCAGCGATAGGCCGGAATCAGCGGACACAGCCGAGTTTCCGGTGGAGTGCGACGATGTGATCCTGGTGGCGACGGACGGAGTTTTCGACAATGTCCCCGAACCTGTGCTGGTCGCAGAGATGAGACGGGCCCAAGGGCTCGCCGCGGACCCGCAGAAGCTGCAGTCGGTAGCCAACTCCATTGCGTGGATGGCTCGCAATCTCTCATTCGACGGTTGCTATATGTCGCCATTCGCAAAAAGCGCCAGACAAAATGGCATTGATGCTATAGGTGGAAAACCAGACGACATCACGGTGCTACTTGCAATCGTAGCGCTATGA
Protein
MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVCGFPKDIANGRTRKGQFGDDAWFATNFQNADVIGVADGVGGWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSEPGDLLAKSYYELLEHKKPILGSSTACVMILDRNESLMRAANIGDSGYMVVRGGRVVYRSHEQQHYFNTPYQLSLPPPGHDRNVLSDRPESADTAEFPVECDDVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSARQNGIDAIGGKPDDITVLLAIVAL

Summary

EMBL
BABH01013841    GDQN01002392    JAT88662.1    RSAL01000235    RVE43773.1    ODYU01000234    + More
SOQ34655.1    KZ149904    PZC78394.1    KQ461154    KPJ08469.1    AGBW02013261    OWR43806.1    KQ459599    KPI94393.1    GAIX01012237    JAA80323.1    KZ288280    PBC29630.1    KQ434868    KZC09202.1    GBYB01010771    JAG80538.1    KQ977634    KYN01174.1    KQ980304    KYN16747.1    GL761538    EFZ23156.1    KQ981820    KYN35344.1    GL888644    EGI58665.1    KQ976465    KYM84347.1    ADTU01018383    GL434909    EFN74319.1    KK107681    QOIP01000006    EZA48103.1    RLU21518.1    KK852473    KDR23093.1    GL447952    EFN85653.1    AK417554    BAN20769.1    GECU01020461    JAS87245.1    KQ760974    OAD58584.1    GEBQ01009549    JAT30428.1    GEDC01003817    JAS33481.1    KK854496    PTY16371.1    GALX01004558    JAB63908.1    KQ982254    KYQ58593.1    GEZM01057614    JAV72217.1    GBHO01034867    GBRD01003281    GDHC01010807    JAG08737.1    JAG62540.1    JAQ07822.1    GDKW01000514    JAI56081.1    ACPB03000489    GAHY01000571    JAA76939.1    GFTR01004827    JAW11599.1    GECL01002710    JAP03414.1    PBC29629.1    GBBI01000614    JAC18098.1    LBMM01001467    KMQ96267.1    DS235255    EEB14038.1    KQ971362    EFA08945.1    GANO01003276    JAB56595.1    CCAG010017571    EZ423091    ADD19367.1    GAKP01015734    JAC43218.1    GEDC01011414    GEDC01001181    JAS25884.1    JAS36117.1    GDHF01017542    JAI34772.1    PYGN01000803    PSN40625.1    JRES01000507    KNC30520.1    GAMC01018386    JAB88169.1    GGMS01009839    MBY79042.1    ABLF02016317    AK340564    BAH71150.1    GFXV01002480    MBW14285.1    KQ414619    KOC67736.1    GGMR01008044    MBY20663.1    GFDF01006533    JAV07551.1    CVRI01000020    CRK91413.1    CH940647    EDW68838.1    CH379067    EAL31309.1    CH916366    EDV96432.1    CH935494    CH933816    EDW05466.1    EDW17127.1    CH963847    EDW72799.1    OUUW01000009    SPP84865.1    CP012525    ALC43655.1    CH902618    EDV38892.1    GAPW01002733    JAC10865.1    CH480817    EDW50060.1    CM000363    CM002912    EDX08814.1    KMY96851.1    AE014296    AY121659    AAF47506.1    AAM51986.1    AGB93956.1    GDIQ01040710    JAN54027.1    CH954178    EDV50172.1    CH477414    EAT41413.1    CM000159    EDW92847.1    GFXV01001823    MBW13628.1    CCAG010008402    GDIQ01004321    JAN90416.1    GEMB01002829    JAS00370.1    NEVH01020940    PNF20487.1    AAAB01008799    EAA03814.4    APCN01002006    GDRN01060599    GDRN01060597    JAI65333.1    GDIQ01109099    JAL42627.1    GDIQ01150447    JAL01279.1    LRGB01000512    KZS18503.1   
Pfam
PF07228   SpoIIE
Interpro
IPR039123   PPTC7        + More
IPR001932   PPM-type_phosphatase_dom       
IPR036457   PPM-type_dom_sf       
SUPFAM
SSF81606   SSF81606       
Gene 3D
PDB
6AE9     E-value=5.70417e-10,     Score=153

Ontologies

Topology

Length:
304
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00352
Exp number, first 60 AAs:
0.00194
Total prob of N-in:
0.01621
outside
1  -  304
 
 

Population Genetic Test Statistics

Pi
192.544646
Theta
181.097553
Tajima's D
-0.938806
CLR
138.261632
CSRT
0.150442477876106
Interpretation
Uncertain
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