SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04523
Annotation
PREDICTED:_uncharacterized_protein_LOC101737699_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.858
 

Sequence

CDS
ATGGAATCACGCAGCGCGCCGCCGAGCCCCGAGGATCCCGGGGAGGCGGTGTTCGACACTCGATGCGGTCGATACCCGCACCAGCCATCCCTGCAAAGAAACTTCGCCAGCTGTCGCGAAACGACGCGTCCACGTCCCCTCCATCGCCATGCTGCATCTGAACCTGCACGGCCTGATGATCACGTCCTAACTACTGCCGAGGTTCACGACTATCCCTCTTCTGAATCAGGCATAGCGGCAGACTGCCCTCATCCACACACGAGTAACGCAGAAGACAGTCCTTCATACGACAGATCAGATTACGAAGGGAACTGTAACTATACTCTCAGGCGTACACCTGATTATCATCATACACTCGACTGTAAACATAGGACCCTAGATTATAATCGAAGTCGAACTCCTGATTACAGTCATGGACATATTAACGATTTTGACCGGGGTCATAGTAAAACACAACAGCCTCGTCGAACGCATAGGAAGCACAGACGAGAAGAAGACGACGGTGCTCATTCTTTGGATGAACGATGCGCACGCGACCTTGACGAAATCTTACCGGCCAGACTTGCAGCAGTTAACTTGTCAAGAGAACCGCCACCGCAGACGTGGGATCGCAGCAACATCACCGCTACTATGGAGCGATTTGAGCCGATTGATTATTCATATGCTTACTACGACCACCATTTATCGATGCCGTCGTCTTCAAGAAAAGCAAATCGACAACGAGGACGTGGTGCAGTTCCACGGGAGCGAACCTCTCGTCACAATTATGTCACAAGATATGGAACGGAAGAAAATATCTACGAAGAAATTACTGATGGTACGAGAACTTGCCCAAAACATCGCTACGTTCCTAGGCAGTCGCTAGTATCGCTGGACAGAAGCGTGGTTGAAGAAGAGGTCCGCCGCGTAGAGTCAAGGCATAAGCGAATTTTAGGCGAACTGAATCTAAGTGTCGAAGCCATGCTGATGCCTGAGTGTGAATCGCCTGACTCAGAACGTGCAGAAGATAGAGACAATATTGAAGAATTACTAAGAGTGGGCCCAACGGATGAGCTACTATCACCGGCCAGTTGGATTCGCAATCTCCTAGGAGCTCAAGTTGTGGGGATGCAAAAGCCAGTGGATTTTGGAATAAAAAATCCTGGAAGAAAATATCTGGGTTCTCCAGCTCGAATAGCATTAACAAAGCAGGCCTCACGGGTCTGCTCGTTAGGTACACTTTCCGGCGTAAGTCCGGCTCGCAGGGCTCACAGGGCAGGCGGCGGACCGAGCCCGTCAAATGCGATGCGTGCCTCTCACAACGATGTTAGCCGCACTATCGATGAAGCGTGTAGGCCAAGCAGACCTAAATCCAGAACAGCCACTATCCCGTACAGCTACTCCAACGGAAAACTGGTGGTGCCGCTGGATTCCGTAGCACAGAGCTGA
Protein
MESRSAPPSPEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARPDDHVLTTAEVHDYPSSESGIAADCPHPHTSNAEDSPSYDRSDYEGNCNYTLRRTPDYHHTLDCKHRTLDYNRSRTPDYSHGHINDFDRGHSKTQQPRRTHRKHRREEDDGAHSLDERCARDLDEILPARLAAVNLSREPPPQTWDRSNITATMERFEPIDYSYAYYDHHLSMPSSSRKANRQRGRGAVPRERTSRHNYVTRYGTEENIYEEITDGTRTCPKHRYVPRQSLVSLDRSVVEEEVRRVESRHKRILGELNLSVEAMLMPECESPDSERAEDRDNIEELLRVGPTDELLSPASWIRNLLGAQVVGMQKPVDFGIKNPGRKYLGSPARIALTKQASRVCSLGTLSGVSPARRAHRAGGGPSPSNAMRASHNDVSRTIDEACRPSRPKSRTATIPYSYSNGKLVVPLDSVAQS

Summary

Interpro
IPR039919   ARHGEF10/ARHGEF17       
PDB
5VH1     E-value=0.0189211,     Score=90

Ontologies

GO

Topology

Length:
475
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00091
outside
1  -  475
 
 

Population Genetic Test Statistics

Pi
188.00562
Theta
180.861962
Tajima's D
0.023832
CLR
0.950443
CSRT
0.375881205939703
Interpretation
Uncertain
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