Gene

KWMTBOMO04519

Pre Gene Modal

BGIBMGA005352

Annotation

PREDICTED:_transducin_beta-like_protein_2_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr8(-):8661555-8666567      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.894

CDS

ATGGGAGAGATTGAAAGCGGTCAAAACATTCACGTGTTCCTCTTGTCGGCAACTGCAGTTTTAGTCTGCGTTTTGTTGCATTTCATTTACAAAATTATATTCCGCAACAAAAACCAAGCGGTGGAGGAACGTGAGAGAGAGAACAATTCTGGCACTCTCACTGATGAACCGCCGTGTGAAGCCGTTGCGGAGACACGCGTCGGCGGTAAAAGCAAAAAACGCCCAGCATGGAAAGGAAAAACGGACTTCAGCCATCCCTGGCTTATGAAGAATCTCAAGGGTCATCCCGGAACGGTTTTGTTAATGGATTTCTCCGCCAACGGCAAGTTCATGGCCGCTACCTGTGATGGTAAGTTCTCTCCAACATTTACAAATGCTTAA

Protein

MGEIESGQNIHVFLLSATAVLVCVLLHFIYKIIFRNKNQAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDGKFSPTFTNA

Uniprot

H9J760   A0A2H1WJN3   A0A2W1BTH2   A0A194PTF5   S4Q0C7   A0A194QSI4   + More
A0A212F6P6   A0A1E1WEL1   A0A1E1WND9   A0A0A9Y2A4   B7QL80   A0A146MB66   A0A147BEV3   A0A1Y1MZI9   A0A1Y1N1I3   R4G3I1   K1Q541   A0A139WCZ4   A0A0C9PMH3   E2BXL5   U5EHC5   F7ATG5   A0A1W2W4K0   A0A0R3QW65   A0A0C2CS42   A0A2L2XVY6   A0A146QZ75   A0A183GXB2   A0A3P8EF96   A0A146UZU6   A0A3Q2QZI4   A0A3L8DHF0   A0A146V0A5   A0A146UZT9   A0A182ECV2   A0A044QND0   A0A1S0UJB3   A0A146MLX8   A0A1B6DK88   A0A0K0JDD1   A0A1S3RLC9   A0A0I9N6A8   A0A3S1C787   A0A3B3T0F3   A0A1S3LQ99   A0A0L7R5I1   A0A0N4YQG0  

Pubmed

19121390    28756777    26354079    23622113    22118469    25401762    + More
26823975    29652888    28004739    22992520    18362917    19820115    20798317    12481130    15114417    26561354    30249741    22919073    17885136    29240929   

EMBL

BABH01013792    ODYU01009024    SOQ53122.1    KZ149904    PZC78372.1    KQ459599    + More
KPI94415.1    GAIX01000018    JAA92542.1    KQ461154    KPJ08447.1    AGBW02009987    OWR49398.1    GDQN01005631    JAT85423.1    GDQN01002511    JAT88543.1    GBHO01045019    GBHO01045018    GBHO01019979    GBHO01019783    GBRD01003670    JAF98584.1    JAF98585.1    JAG23625.1    JAG23821.1    JAG62151.1    ABJB010034310    ABJB010725763    ABJB010959403    DS963933    EEC19602.1    GDHC01004172    GDHC01001611    JAQ14457.1    JAQ17018.1    GEGO01006064    JAR89340.1    GEZM01020113    JAV89396.1    GEZM01020112    JAV89397.1    ACPB03015393    GAHY01002185    JAA75325.1    JH816849    EKC28998.1    KQ971361    KYB25819.1    GBYB01002273    JAG72040.1    GL451265    EFN79584.1    GANO01003084    JAB56787.1    EAAA01000293    UZAG01017289    VDO33941.1    KN731728    KIH59653.1    IAAA01003393    IAAA01003394    LAA00256.1    GCES01124899    JAQ61423.1    UZAH01043088    VDP62787.1    GCES01075597    JAR10726.1    QOIP01000008    RLU19771.1    GCES01075598    JAR10725.1    GCES01075599    JAR10724.1    UYRW01001696    VDK80007.1    CMVM020000328    JH712107    EJD75802.1    GCES01165621    JAQ20701.1    GEDC01011268    JAS26030.1    LN857020    CTP81521.1    RQTK01000192    RUS84826.1    KQ414652    KOC66103.1    UYSL01024218    VDL83217.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000001555    UP000015103    + More
UP000005408    UP000007266    UP000008237    UP000008144    UP000050602    UP000050761    UP000265000    UP000279307    UP000077448    UP000271087    UP000024404    UP000006672    UP000087266    UP000271974    UP000261540    UP000053825    UP000038043    UP000271162   

PRIDE

H9J760   

Pfam

PF00400   WD40        + More
PF00929   RNase_T
PF15870   EloA-BP1

Interpro

IPR019775   WD40_repeat_CS        + More
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR012337   RNaseH-like_sf       
IPR034922   REX1-like_exo       
IPR013520   Exonuclease_RNaseT/DNA_pol3       
IPR036397   RNaseH_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR020472   G-protein_beta_WD-40_rep       
IPR031736   EloA-BP1       

SUPFAM

SSF50978   SSF50978        + More
SSF53098   SSF53098       
SSF50998   SSF50998       

Gene 3D

2.130.10.10     3.30.420.10    

CDD

cd06145  REX1_like

ProteinModelPortal

H9J760   A0A2H1WJN3   A0A2W1BTH2   A0A194PTF5   S4Q0C7   A0A194QSI4   + More
A0A212F6P6   A0A1E1WEL1   A0A1E1WND9   A0A0A9Y2A4   B7QL80   A0A146MB66   A0A147BEV3   A0A1Y1MZI9   A0A1Y1N1I3   R4G3I1   K1Q541   A0A139WCZ4   A0A0C9PMH3   E2BXL5   U5EHC5   F7ATG5   A0A1W2W4K0   A0A0R3QW65   A0A0C2CS42   A0A2L2XVY6   A0A146QZ75   A0A183GXB2   A0A3P8EF96   A0A146UZU6   A0A3Q2QZI4   A0A3L8DHF0   A0A146V0A5   A0A146UZT9   A0A182ECV2   A0A044QND0   A0A1S0UJB3   A0A146MLX8   A0A1B6DK88   A0A0K0JDD1   A0A1S3RLC9   A0A0I9N6A8   A0A3S1C787   A0A3B3T0F3   A0A1S3LQ99   A0A0L7R5I1   A0A0N4YQG0  

KEGG

101737318    K23325 transducin beta-like protein 2 | (RefSeq) transducin beta-like protein 2

GO

GO:0016021   GO:0003676   GO:0004527   GO:0005634  

Length:

126

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.94402

Exp number, first 60 AAs:

20.91853

Total prob of N-in:

0.10761

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  29

inside

30  -  126

 

 

Pi

250.191053

Theta

188.154608

Tajima's D

1.121347

CLR

0.002774

CSRT

0.696665166741663

Interpretation

Uncertain