Gene

KWMTBOMO04517

Pre Gene Modal

BGIBMGA005454

Annotation

PREDICTED:_tripartite_motif-containing_protein_2-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr8(+):8564068-8577304      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.135

CDS

ATGTATTGTTGTTCGTTTCTCTCACGGCTGGGTGTCGGGATGGCGAGCATGAGTTCCACGCTCGTCGAAACCGTCTCCATCAACTACGAGGACTTTAATGAAAGTTTCCTCACATGCGGCACATGTTTATGCACTTATGATGGAGGCGAACACACCCCGAAGCTTCTGCCGTGCTCACACACGGTTTGTCTTCATTGCCTAACGCGCATCGCGGCTTCACAGACACGGGACGCCGGCAGCTTTCGATGTCCGATTTGTCGCGAACTGATCACAATACCTCGAGGAGGGGTACCGGCTCTCCCGCCTTCGTTTCTCGTCAATCAGCTGCTCGATCTTATGGCACGGCAACGCCGAGAGGTTATACCGCAGTGTAGCTCGCACCCAGGCAGGGAGCTACTTTTCTGCGAGACATGCGATTGCGTTTTTTGTCGTTACTGTGCCGATGGACCGCACAGCGACACGCCGTGTGACCACACAGTTGTACCGTTTTCGATAGCGTTGAAAAGGATGTCAGAAATATTGCTATACAGAGCCAACGAGTGCCTGAGCAAATTAGGTTCGGCTAGGGAAGCGGTAGCAGGTGAATTGAGGAGATTGGAAGCGGCTGCAACTGCGGCAGACGAAGCTATTGATAGACACTTTGCGGAACTGAGAGCGGCACTAGAGAAGAGGCATAATGAATTAAAGTCTGCCGCCGCAGCGGCTGCCAGTCACAAACGAAAGTTACTCGAAGAACAATTGAAGCTGATTGATGCAGAGAAATCTAAAGTGGAAGCTGAGTGTTCCGGGTTACAGCAACAGGTAGAAGTGCGTGAAGTGAGCAGCAGAGCGGCTGCTTTGGGCGCCAGATTGGGTGACGCGGCTGCATTGGCCGAGCCAAGAGAGAACGCGTTCTTAGCCGTCGACTTCGCGCACAACGACGCTCAACAACGCTTCGTGGATTCTCTCGAAGTGCTCGGTCGTGTCAGGACCAGTACTACTTTCCCAGGGCTGTGTTCGTTACAACTCGAATCATCATGCGTGTCTGGTTTGGAAGTGGTGGTGGTTCTCCGCACCGTGGACTATCACGGTGAGGCGCGTAGCACCGGCGGGGACCCCGTGACGGCGGCCGCCACGCTCGACGACGCCCCTCTGCCTTGCACCGTCACCGATCTGGATTCCGGACTCTATAGGATCTCGATGCGTCCGTGGAGTGCGGGCTCGGTGTCGGTGCGCGTGCTGGTGTTCTCCCGCGCCGTGCGCGACTCGCCGCTGCGCGCCGCCGTGACGTCACAAGCCGCGCCGCTGCGGGTGTGGGGCGCGCGGGGGAACGGGAAGGACCAGCTGAGCCAGCCCGTCGCGCTAGCCAGATGTCCGAAGCGTAAAGAAATTTATGTTCTGGATGCTGGTAACTCAAGAGTGAAAGTGTTGGACGACGAGACGTTCGCTTTCAAAACGCATATCGTGAATGAAGGACTGGCGGGTCGCAGTTGTACCGGCATTGCTGTGACCGCGGAGGGCGTGGCCGCCGTCAATTGGAGGACTCGCACTATCACGGAGGTGAACACAGAAGGTACGACGCTAAGAACGATTCGTTCGGATCGTCTGGTGGAGCCGGTGTGCGTGGCGGCCGACGTGGCGACGCGACGTCTGGCCGTCGCCGACAACGGCGCCAGAACTGTCTTCGTCTTCGATCGCTACGGAAACATCGAAAGAGAAATAGGCAACGGTGATCTCGGCTTAGTGGGTGGTCTAGCTTTATCCGAAGACCTCATCATCATAGCTGACGTGGCGGTGCGGATCTACGATTCTGAAGGAAATCTCAAAAACACATTGGCCCCCGTCCCCAAAGGTCGAGGGGTGTACGGTGGGGTGGCTATAGACGAGACCGGCAGCGGCAAGCACATCGTGTGCGCTCGCTCGGTGCGCGGGCGGGCCGCCCTCGTGGTGCTGGAGGCGGGGGGCGGCGGGAAGACGCTGGCGGCCTGCGAGCTCCTCGACAAGAAGCCGCGGAGGGTCGCCGGCATCGCGCTGCTGCCCAACAAGAAGGTGCTGCTAGCCGACCTGGCGGGAGACTGCTTAAGACTGCACACTTACTGGTGA

Protein

MYCCSFLSRLGVGMASMSSTLVETVSINYEDFNESFLTCGTCLCTYDGGEHTPKLLPCSHTVCLHCLTRIAASQTRDAGSFRCPICRELITIPRGGVPALPPSFLVNQLLDLMARQRREVIPQCSSHPGRELLFCETCDCVFCRYCADGPHSDTPCDHTVVPFSIALKRMSEILLYRANECLSKLGSAREAVAGELRRLEAAATAADEAIDRHFAELRAALEKRHNELKSAAAAAASHKRKLLEEQLKLIDAEKSKVEAECSGLQQQVEVREVSSRAAALGARLGDAAALAEPRENAFLAVDFAHNDAQQRFVDSLEVLGRVRTSTTFPGLCSLQLESSCVSGLEVVVVLRTVDYHGEARSTGGDPVTAAATLDDAPLPCTVTDLDSGLYRISMRPWSAGSVSVRVLVFSRAVRDSPLRAAVTSQAAPLRVWGARGNGKDQLSQPVALARCPKRKEIYVLDAGNSRVKVLDDETFAFKTHIVNEGLAGRSCTGIAVTAEGVAAVNWRTRTITEVNTEGTTLRTIRSDRLVEPVCVAADVATRRLAVADNGARTVFVFDRYGNIEREIGNGDLGLVGGLALSEDLIIIADVAVRIYDSEGNLKNTLAPVPKGRGVYGGVAIDETGSGKHIVCARSVRGRAALVVLEAGGGGKTLAACELLDKKPRRVAGIALLPNKKVLLADLAGDCLRLHTYW

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9J7G2   A0A2H1WJ77   A0A2W1BVK2   A0A212EU18   A0A194PN49   A0A194QSE3   + More
A0A0L7LAU3   A0A151IT52   A0A1Y1MW86   D6X1L3   A0A151IHA4   A0A087ZQ86   A0A1Y1MXK3   A0A195BX43   A0A3L8DI78   A0A2J7PTV3   A0A195F165   A0A026WT67   K7IRM5   A0A139WCH6   E2ACM2   A0A139WCL8   A0A067RB97   A0A1W4W8A5   A0A1W4WJK0   E2BNV4   A0A232EYW1   A0A2A3EIX6   A0A310STZ2   A0A139WCH5   A0A1B6EPD4   E0W0L9   A0A154P438   A0A1W4WIK8   A0A1W4WJU5   A0A0M9A2G0   A0A2J7PTV5   A0A151XG02   A0A0L7R4B5   A0A1Y1MZN3   A0A1Y1MW11   A0A1W4W8A3   A0A0C9RGY2   A0A0A9XTU7   A0A146M342   A0A1S3HIE6   A0A0P4VY24   V4A8J1   A0A3S5WGY9   A0A3S3NXN4   A0A210Q5K8   A0A0P4VT58   A0A023F0M5   A0A2P6KLZ8   A0A0P4W0C3   A0A2P8YRY4   A0A2C9K4L2   R7V8F5   T1IJA1   A0A0B7A9T4   A0A0L8FG06   A0A0K2V557   A0A0T6AWK9   T1ELW1   T1KXQ6   T1KXG2   A0A147BPZ7   A0A1Y1MW26   T1IBP8   L7MDZ2   A0A131YFM6   A0A1E1XHI1   F4WAU9   A0A132AD25   A0A0V1GZU4   A0A0V1MKU9   A0A1D1V988   A0A0V0V9N3   A0A2T7PQ59   F1KUD7   A0A0J7KPV1   A0A1Y3E554   A0A0V1G180   A0A0V1DZK2   A0A0V1IER3   A0A0V0S1G7   A0A0V0ZRI6   A0A183UHW9   A0A0N4UAR5   A0A267GZ12   A0A0V1CIL3   A0A0B2VYF2   A0A0V1CHV4   A0A0V1KZ58   A0A0V1L001   A0A0V0VA23   A0A0V1NTJ2  

Pubmed

19121390    28756777    22118469    26354079    26227816    28004739    + More
18362917    19820115    30249741    24508170    20075255    20798317    24845553    28648823    20566863    25401762    26823975    23254933    28812685    25474469    29403074    15562597    29652888    25576852    26830274    28503490    21719571    26555130    27649274    21685128   

EMBL

BABH01013789    ODYU01009024    SOQ53125.1    KZ149904    PZC78371.1    AGBW02012491    + More
OWR44986.1    KQ459599    KPI94418.1    KQ461154    KPJ08443.1    JTDY01001897    KOB72597.1    KQ981039    KYN10143.1    GEZM01019125    JAV89863.1    KQ971370    EFA09351.2    KQ977636    KYN01156.1    GEZM01019131    JAV89858.1    KQ976394    KYM93147.1    QOIP01000008    RLU19902.1    NEVH01021221    PNF19762.1    KQ981880    KYN33912.1    KK107109    EZA59133.1    KYB25604.1    GL438568    EFN68766.1    KYB25605.1    KK852619    KDR20098.1    GL449507    EFN82637.1    NNAY01001573    OXU23551.1    KZ288229    PBC31725.1    KQ759887    OAD62128.1    KYB25606.1    GECZ01029988    JAS39781.1    AAZO01006794    DS235861    EEB19175.1    KQ434809    KZC06603.1    KQ435756    KOX75915.1    PNF19763.1    KQ982174    KYQ59314.1    KQ414658    KOC65664.1    GEZM01019137    JAV89855.1    GEZM01019127    JAV89862.1    GBYB01007585    JAG77352.1    GBHO01038147    GBHO01027782    GBHO01020271    GBHO01020270    GBHO01020267    JAG05457.1    JAG15822.1    JAG23333.1    JAG23334.1    JAG23337.1    GDHC01005217    JAQ13412.1    GDRN01099147    JAI58826.1    KB202283    ESO91335.1    NCKU01002966    RWS08444.1    NCKU01003456    NCKU01003187    RWS07481.1    RWS08004.1    NEDP02004925    OWF44017.1    GDRN01099146    JAI58827.1    GBBI01004176    JAC14536.1    MWRG01008973    PRD27346.1    GDRN01099149    JAI58825.1    PYGN01000400    PSN47003.1    AMQN01005353    KB295796    ELU12631.1    JH430236    HACG01030897    HACG01030898    HACG01030899    CEK77762.1    CEK77763.1    CEK77764.1    KQ433008    KOF62572.1    HACA01028069    CDW45430.1    LJIG01022735    KRT78983.1    AMQM01002920    KB095959    ESO09257.1    CAEY01000696    CAEY01000695    GEGO01002959    JAR92445.1    GEZM01019128    JAV89861.1    ACPB03018351    GACK01002844    JAA62190.1    GEDV01010394    JAP78163.1    GFAC01000408    JAT98780.1    GL888053    EGI68705.1    JXLN01012343    KPM08360.1    JYDP01000181    KRZ03806.1    JYDO01000079    KRZ72429.1    BDGG01000004    GAU98239.1    JYDN01000062    KRX60226.1    PZQS01000002    PVD35561.1    JI166027    ADY41491.1    LBMM01004589    KMQ92264.1    LVZM01023116    OUC40253.1    JYDT01000009    KRY92011.1    JYDR01000153    KRY66916.1    JYDS01000211    JYDV01000093    KRZ21278.1    KRZ35262.1    JYDL01000048    KRX20537.1    JYDQ01000100    KRY15176.1    UYWY01019821    VDM39410.1    UYYG01001166    VDN58168.1    NIVC01000092    PAA91266.1    JYDI01000195    KRY48828.1    JPKZ01000619    KHN86459.1    KRY48827.1    JYDW01000188    KRZ52595.1    KRZ52594.1    KRX60225.1    JYDM01000102    KRZ87303.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000037510    UP000078492    + More
UP000007266    UP000078542    UP000005203    UP000078540    UP000279307    UP000235965    UP000078541    UP000053097    UP000002358    UP000000311    UP000027135    UP000192223    UP000008237    UP000215335    UP000242457    UP000009046    UP000076502    UP000053105    UP000075809    UP000053825    UP000085678    UP000030746    UP000285301    UP000242188    UP000245037    UP000076420    UP000014760    UP000053454    UP000015101    UP000015104    UP000015103    UP000007755    UP000055024    UP000054843    UP000186922    UP000054681    UP000245119    UP000036403    UP000243006    UP000054995    UP000054632    UP000054805    UP000054826    UP000054630    UP000054783    UP000050794    UP000267007    UP000038040    UP000274756    UP000215902    UP000054653    UP000031036    UP000054721    UP000054924   

PRIDE

H9J7G2    L7MDZ2   

Pfam

PF13639   zf-RING_2        + More
PF13445   zf-RING_UBOX
PF00630   Filamin
PF00643   zf-B_box
PF01436   NHL
PF15388   FAM117
PF00089   Trypsin
PF14634   zf-RING_5
PF00097   zf-C3HC4
PF04870   Moulting_cycle

Interpro

IPR011042   6-blade_b-propeller_TolB-like        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR017868   Filamin/ABP280_repeat-like       
IPR017907   Znf_RING_CS       
IPR014756   Ig_E-set       
IPR001841   Znf_RING       
IPR000315   Znf_B-box       
IPR013783   Ig-like_fold       
IPR013017   NHL_repeat_subgr       
IPR001298   Filamin/ABP280_rpt       
IPR027370   Znf-RING_LisH       
IPR001258   NHL_repeat       
IPR026642   Glcci1/FAM117       
IPR033116   TRYPSIN_SER       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
IPR011011   Znf_FYVE_PHD       
IPR018957   Znf_C3HC4_RING-type       
IPR006954   MLT-10-like       

SUPFAM

SSF81296   SSF81296        + More
SSF50494   SSF50494       
SSF57903   SSF57903       

Gene 3D

2.120.10.30     2.60.40.10     3.30.40.10    

CDD

cd00021  BBOX
cd00190  Tryp_SPc

ProteinModelPortal

H9J7G2   A0A2H1WJ77   A0A2W1BVK2   A0A212EU18   A0A194PN49   A0A194QSE3   + More
A0A0L7LAU3   A0A151IT52   A0A1Y1MW86   D6X1L3   A0A151IHA4   A0A087ZQ86   A0A1Y1MXK3   A0A195BX43   A0A3L8DI78   A0A2J7PTV3   A0A195F165   A0A026WT67   K7IRM5   A0A139WCH6   E2ACM2   A0A139WCL8   A0A067RB97   A0A1W4W8A5   A0A1W4WJK0   E2BNV4   A0A232EYW1   A0A2A3EIX6   A0A310STZ2   A0A139WCH5   A0A1B6EPD4   E0W0L9   A0A154P438   A0A1W4WIK8   A0A1W4WJU5   A0A0M9A2G0   A0A2J7PTV5   A0A151XG02   A0A0L7R4B5   A0A1Y1MZN3   A0A1Y1MW11   A0A1W4W8A3   A0A0C9RGY2   A0A0A9XTU7   A0A146M342   A0A1S3HIE6   A0A0P4VY24   V4A8J1   A0A3S5WGY9   A0A3S3NXN4   A0A210Q5K8   A0A0P4VT58   A0A023F0M5   A0A2P6KLZ8   A0A0P4W0C3   A0A2P8YRY4   A0A2C9K4L2   R7V8F5   T1IJA1   A0A0B7A9T4   A0A0L8FG06   A0A0K2V557   A0A0T6AWK9   T1ELW1   T1KXQ6   T1KXG2   A0A147BPZ7   A0A1Y1MW26   T1IBP8   L7MDZ2   A0A131YFM6   A0A1E1XHI1   F4WAU9   A0A132AD25   A0A0V1GZU4   A0A0V1MKU9   A0A1D1V988   A0A0V0V9N3   A0A2T7PQ59   F1KUD7   A0A0J7KPV1   A0A1Y3E554   A0A0V1G180   A0A0V1DZK2   A0A0V1IER3   A0A0V0S1G7   A0A0V0ZRI6   A0A183UHW9   A0A0N4UAR5   A0A267GZ12   A0A0V1CIL3   A0A0B2VYF2   A0A0V1CHV4   A0A0V1KZ58   A0A0V1L001   A0A0V0VA23   A0A0V1NTJ2  

PDB

5JW7     E-value=1.26659e-09,     Score=153

KEGG

101737170    K11997 tripartite motif-containing protein 2/3 | (RefSeq) tripartite motif-containing protein 2-like

GO

GO:0008270   GO:0046872   GO:0004252   GO:0016021   GO:0005515   GO:0005622   GO:0016887   GO:0030870   GO:0006310   GO:0006418   GO:0009058   GO:0016742   GO:0003824  

Length:

693

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.262850000000001

Exp number, first 60 AAs:

0.24718

Total prob of N-in:

0.01126

outside

1  -  693

 

 

Pi

214.599922

Theta

152.789273

Tajima's D

1.049519

CLR

0.058497

CSRT

0.67891605419729

Interpretation

Uncertain