Gene

KWMTBOMO04511  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005358

Annotation

WD_repeat-containing_protein_75_[Papilio_xuthus]

Location

Bomo_Chr8(-):8337769-8346387      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.975

CDS

ATGGTCGTTAAAGTAGATACAGCCAATAAGCTAAAATATTGCCTTAAAAGAAAAGCGGGTAGAAGTATTATAGAAAGACGCCCAATATTTTCTCCGGACGGCGAATCAGTGGCAGTAATAGTAGAAGATATAGTGCATGTATACAATGTACAAACATGCGAACTAGTCAGGACCTTAGAATCTGAAACTCCCATTGATGGGTTTGTTGGAATAGAATTTCCCCAAAATGAAGATTACAATTTATATGGTTGCTCTAAATCTGGACTGGTCACAATATGGACGTGGGACAAAGGAGCAGTTCTCAGAGATACTCATCTTCAAATACCTGCAAATTTAATAGTACTGACATTTGATTTAATAAATGAAAATGAATGTTTTATAACTGGAGCTGGTGGTTCATACTCAAAAAACATACATTATGCATCATATTCAATAAAAACTGGTGAATTACTTTGTGAATACGGAACTCGGATATGGAATACTCAACCTTTGATAAAGGTTGCTCTCGGTTGGAACAACGATGACAGATTTGCTGCAATCTGTAATGGAACAAAATCATTGTACATTCAAAGCATTTACAATCAGAATACATCTGCAATTTTCTACAATTTCTCAGAATATCGAATAGTGTCTGTAGCTTGTCACAAAAGTATCAATACATTAGCAGTAACAGACACTCTTGGCCGAGCCACAGTCATCAGAGGAAATTTATATGACATTAGGAATGCAGCAAAAGAAGTGTTTCATTGGCATTGCCTGCCACCTATGGCTTTGTGTTTCTCAATGCAAGGTAATTATTTATACTCTGGAGGTGTGGAATCGGTGCTCGTGAAGTGGACCTTGGGTAGCTTGGCATACAAAGCTGCAGAGAAGTCATTCCTTCCTCGCCTTCCTGGATTGGTGCGGTATATAACAACAAACAACACACATATTGCAATCACCCTCACAAACAACTCAATAGTGATAGCGAATGCACAAATGCATGCTGTTGGCACAATAGCTGAGTGTGGTGGTGTTTCGCCCACTGCGCGCACTCTCGAACCTGTCCTTATCTACCAGCACAAGCTTGGAGCTCTACTAATGCACGGACCGACCGGTCACTTGCAATTGTATTCTACAACCTCCAACAAAGTTTTATATAATATTGACATCACTGGTCAAAATCGGATACAACCTGAGAGGTGGAACCTTATGCCTTTACAAACCGAAATTACATGTGCATCCCTAAGCCCCAACGGGCAATGGTTAGTCACATCGGAATATCGAAATGACGGTTTTATGTACCCAGAAGAACGGCTAAAATTCTGGACGATAAATCAGAATAACAAACAAAAATCACCGTTCTTGATGAACACCTGCATAAACCTGTCCCACGGCGGCTGTCGGGTTGTTGCTCTGGCGTTCAGTTATGATGGAAAATTGTGCGTGTCATCCGGATTGGATCAAAAATTTAGAGTTTGGGAATTTGACTGTTCGAATAACAAGAGGGGCATTTGGGTGTGTTTGACAGCGTGTTACTATTCATCGGGCGTGGCTCAGTACTTGTCCCAAGGTATATTGAACAATTTTAAAATCGGTCACTCCGAGCCCAGCGATGATTTCACTCAATTCCCCTACATGAAGGAAATGAGAAAAGATGACCCGGTAAAAAAGCTGGCAAACTTTCACAACGAATACACTATAACGGACGACAGGATGAGCGCTGGCTCGTGCAGTAACAGCGAAAACGAAATGAGCGGATTGGCTATGTCAAGAGATGGGTCGTTAATAGCCGCGTGGTTCGGTTGTAAGCTTACACTCTGGGACACATATCTGTGCACTTTAAGGACGAGTCTGTCTCATCCCGCTTTGAGGCCGAAAGGCGTCGACGTTAAATTCGGGAACAACGACGCTGCACATTACTTGGTGTGCACAACGGAATCTTGCTTGGCCGTCTGGAGTTTGTTATCTTTGACCGTTAAATGGTTAGTTCAATTGAACCCCATGGCTCTGTGCAGTGATTTACTGTCGAACAAAATGGCCGTTGTTACTTCGAATAATGATATACACATATTTACTCCTCACAGTTCCAAGCCTCTGATGTCACAGCAACGCGTCTCGGATCCGAATTTAGGAGTGTTCAAAAAATGCGCCTTCGGAGCGTCGACGAAAGACGGTGTTACGTTATATTTGCTGAGAAATGATGTTGAGGTCTTCAGTTTCGAACCGGAGAAAACAAAAGAGGGACGCCTTGAATCGATCCCGCACAGCAACGCGCCCGTCTCCAAGTTCAGTACCCTGCTGGCCGAACAACAACTGTCCGCAGTCCGTAGAGGCGCACCGGTCGACACGCTGGCGTCAGACGTGGACGCTACGAGCAGTGCGGCCATCTCGAACGTATGTATCCATCTAGTAATCGACGTTCCGAAACTCGTGCTATAG

Protein

MVVKVDTANKLKYCLKRKAGRSIIERRPIFSPDGESVAVIVEDIVHVYNVQTCELVRTLESETPIDGFVGIEFPQNEDYNLYGCSKSGLVTIWTWDKGAVLRDTHLQIPANLIVLTFDLINENECFITGAGGSYSKNIHYASYSIKTGELLCEYGTRIWNTQPLIKVALGWNNDDRFAAICNGTKSLYIQSIYNQNTSAIFYNFSEYRIVSVACHKSINTLAVTDTLGRATVIRGNLYDIRNAAKEVFHWHCLPPMALCFSMQGNYLYSGGVESVLVKWTLGSLAYKAAEKSFLPRLPGLVRYITTNNTHIAITLTNNSIVIANAQMHAVGTIAECGGVSPTARTLEPVLIYQHKLGALLMHGPTGHLQLYSTTSNKVLYNIDITGQNRIQPERWNLMPLQTEITCASLSPNGQWLVTSEYRNDGFMYPEERLKFWTINQNNKQKSPFLMNTCINLSHGGCRVVALAFSYDGKLCVSSGLDQKFRVWEFDCSNNKRGIWVCLTACYYSSGVAQYLSQGILNNFKIGHSEPSDDFTQFPYMKEMRKDDPVKKLANFHNEYTITDDRMSAGSCSNSENEMSGLAMSRDGSLIAAWFGCKLTLWDTYLCTLRTSLSHPALRPKGVDVKFGNNDAAHYLVCTTESCLAVWSLLSLTVKWLVQLNPMALCSDLLSNKMAVVTSNNDIHIFTPHSSKPLMSQQRVSDPNLGVFKKCAFGASTKDGVTLYLLRNDVEVFSFEPEKTKEGRLESIPHSNAPVSKFSTLLAEQQLSAVRRGAPVDTLASDVDATSSAAISNVCIHLVIDVPKLVL

Uniprot

H9J766   A0A2H1VX72   A0A194PLW2   A0A2A4ISM0   A0A3S2LB75   A0A194QSH4   + More
A0A212EU10   S4PBR8   A0A0L7L3M8   A0A195EU80   F4WPC4   A0A195B0Z8   E2AYB6   A0A195E5G0   A0A154PCU7   A0A158NR48   A0A2A3EJ31   A0A195CXC6   A0A067RLI0   A0A151WM87   A0A0N0BCB3   A0A088APT8   A0A210PH19   A0A310SCR1   A0A0P5XSV4   A0A1B6EFG8   V3Z1V7   A0A3S3Q5Y6   N6STF4   U4UE16   A0A293MU11   A0A0L7R7F9   A0A0P5B6X0   A0A1S3HTD8   H9GLE2   J9JPU0   A0A1S3HUH7   A0A2P6KST5   A0A0A9XS32   A0A093HAY0   A0A146M7H8   L7MHX6   A0A1W7RBK7   A0A131Z1E8   A0A2M4A9X1  

Pubmed

19121390    26354079    22118469    23622113    26227816    21719571    + More
20798317    21347285    24845553    28812685    23254933    23537049    21881562    25401762    26823975    25576852    26358130    26830274   

EMBL

BABH01013774    ODYU01005000    SOQ45441.1    KQ459599    KPI94426.1    NWSH01007981    + More
PCG62731.1    RSAL01000289    RVE42923.1    KQ461154    KPJ08437.1    AGBW02012491    OWR44992.1    GAIX01004471    JAA88089.1    JTDY01003170    KOB70020.1    KQ981965    KYN31803.1    GL888243    EGI64019.1    KQ976691    KYM77967.1    GL443864    EFN61575.1    KQ979608    KYN20425.1    KQ434874    KZC09641.1    ADTU01023697    ADTU01023698    KZ288232    PBC31484.1    KQ977220    KYN04804.1    KK852553    KDR21475.1    KQ982944    KYQ48966.1    KQ435922    KOX68688.1    NEDP02076709    OWF35767.1    KQ761346    OAD57836.1    GDIP01067880    JAM35835.1    GEDC01000616    JAS36682.1    KB203470    ESO84533.1    NCKU01000688    RWS14561.1    APGK01057533    KB741280    ENN70964.1    KB630229    KB632033    ERL83484.1    ERL88165.1    GFWV01018733    MAA43461.1    KQ414639    KOC66817.1    GDIP01203872    JAJ19530.1    AAWZ02031529    AAWZ02031530    AAWZ02031531    ABLF02031358    MWRG01005840    PRD29372.1    GBHO01023694    JAG19910.1    KL205914    KFV76575.1    GDHC01003637    JAQ14992.1    GACK01002250    JAA62784.1    GDAY02002949    JAV48518.1    GEDV01004271    JAP84286.1    GGFK01004221    MBW37542.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000283053    UP000053240    UP000007151    + More
UP000037510    UP000078541    UP000007755    UP000078540    UP000000311    UP000078492    UP000076502    UP000005205    UP000242457    UP000078542    UP000027135    UP000075809    UP000053105    UP000005203    UP000242188    UP000030746    UP000285301    UP000019118    UP000030742    UP000053825    UP000085678    UP000001646    UP000007819    UP000053584   

PRIDE

H9J766   

Pfam

PF00400   WD40        + More
PF02958   EcKinase

Interpro

IPR001680   WD40_repeat        + More
IPR015897   CHK_kinase-like       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR011009   Kinase-like_dom_sf       
IPR004119   EcKinase-like       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR017986   WD40_repeat_dom       
IPR011044   Quino_amine_DH_bsu       
IPR019775   WD40_repeat_CS       

SUPFAM

SSF56112   SSF56112        + More
SSF50978   SSF50978       
SSF50998   SSF50998       
SSF50969   SSF50969       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J766   A0A2H1VX72   A0A194PLW2   A0A2A4ISM0   A0A3S2LB75   A0A194QSH4   + More
A0A212EU10   S4PBR8   A0A0L7L3M8   A0A195EU80   F4WPC4   A0A195B0Z8   E2AYB6   A0A195E5G0   A0A154PCU7   A0A158NR48   A0A2A3EJ31   A0A195CXC6   A0A067RLI0   A0A151WM87   A0A0N0BCB3   A0A088APT8   A0A210PH19   A0A310SCR1   A0A0P5XSV4   A0A1B6EFG8   V3Z1V7   A0A3S3Q5Y6   N6STF4   U4UE16   A0A293MU11   A0A0L7R7F9   A0A0P5B6X0   A0A1S3HTD8   H9GLE2   J9JPU0   A0A1S3HUH7   A0A2P6KST5   A0A0A9XS32   A0A093HAY0   A0A146M7H8   L7MHX6   A0A1W7RBK7   A0A131Z1E8   A0A2M4A9X1  

PDB

5OQL     E-value=0.000297939,     Score=108

KEGG

101736458    K14552 NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) | (RefSeq) W

PATHWAY

03008    Ribosome biogenesis in eukaryotes - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005730   GO:0045943   GO:2000234   GO:0005515   GO:0046872   GO:0006281   GO:0016887   GO:0030870   GO:0006310   GO:0006418   GO:0009058   GO:0016742   GO:0003824  

Length:

806

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12543

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.00429

outside

1  -  806

 

 

Pi

154.082126

Theta

151.435501

Tajima's D

0.000197

CLR

14.479431

CSRT

0.370631468426579

Interpretation

Uncertain