Gene

KWMTBOMO04498

Pre Gene Modal

BGIBMGA005446

Annotation

PREDICTED:_UPF0454_protein_C12orf49_homolog_[Papilio_xuthus]

Location

Bomo_Chr8(+):8215648-8218754      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.457

CDS

ATGTTCTGGGAAAATGTCACCTTTGATCTACTACGAATGTGGTACGCAGCTTTAATTCGGTTTATCAGAAGAAGACTAGTGCTCGGTATCATATTCGCATCTTCACTGACTTACTGCATTGTCAGTTTTCTAAAAGAGGGTAACCATAGAGATGTGACATACCAAGACATATCAATAGAAAGAAAACCGTTTGTGTGGAGAACACTTCAAGAACATAATGATTCAAATGACCATGTGATCTGCAGGAACTCAGTACAAGGAAAAAACTTTCTTGTTGATGACAGAGGGTATGTATGTCAAAGAAAAGATGTAACGAAAAATGGTTGCTGCGACCCAGAAGCTGACTTCACAGAACGGTACAGCTGTGAATCTTGTAGTAAAAGCAGTTGCTGCGTTGAATATGAACATTGTGTATCATGTTGCTTAGATCCAGGCAAGAGGGACATGCTGGAGATAGTCTTATCAAAACTTTCAACAGAGAAGAGCATTCTCTTCCGCTCATTAACAGATGACTATGAACTATGTCTTACAAAGTGTAGAACAAGCTCATATAGTGTATTGCATGAGAATTCTTACAAAGATCCAACACATAAGCATTGTTTCGGTGATGAGCCACCTGGGTCACATTCAGGTAACAAAATGTAA

Protein

MFWENVTFDLLRMWYAALIRFIRRRLVLGIIFASSLTYCIVSFLKEGNHRDVTYQDISIERKPFVWRTLQEHNDSNDHVICRNSVQGKNFLVDDRGYVCQRKDVTKNGCCDPEADFTERYSCESCSKSSCCVEYEHCVSCCLDPGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKHCFGDEPPGSHSGNKM

Uniprot

A0A194PM02   A0A2A4J860   A0A1E1W395   A0A2H1WY22   A0A194RBJ8   A0A212EI65   + More
S4PLA0   A0A1W4WNY4   A0A1Y1LWC4   A0A0T6AU47   A0A0K8TQK8   A0A2P8ZJ23   N6TJ81   A0A1B6IZF1   A0A067RAU7   A0A1B6FRD1   A0A2J7QZH5   D6WUY8   A0A1B6MB29   V5HE80   A0A1Q3FD30   A0A131Y979   A0A1L8DJA5   A0A1B0CWE5   A0A1B6E552   B0W7T6   A0A0N8AI72   A0A0P6ITS1   Q1HQW8   A0A0P6IHH6   A0A182GD98   A0A023EKB3   E9FXQ0   L7LZ59   E0VKX3   B7QN39   A0A224YPN3   A0A131YJL6   A0A2S2QV08   A0A182N127   A0A1B0AJ45   A0A1A9UHI3   A0A2R5LJR4   A0A023F1E2   A0A293LQN6   J9KLT2   D3TR83   A0A1B0D2V7   G3MR95   A0A1B0AZX6   A0A2H8TU07   A0A1A9XGK8   A0A182J7V5   A0A182QEM5   A0A0P6BCZ2   A0A2M4BZE3   A0A1S3F2K4   A0A182VDH3   A0A2M4BZA7   A0A2M4AVU1   A0A182XQ06   Q7Q4V7   A0A182HMQ4   A0A091FWR4   A0A2M3Z8L6   K9IYS9   A0A087UIC3   A0A182XYC1   A0A182VVG9   A0A182R244   A0A0Q3LZM0   A0A3Q3KZR5   G1PJC8   W5JU08   A0A1B6EHG9   A0A250XW47   A0A093HDC1   A0A0L0BSX7   A0A091I696   A0A1S3A3N3   V9LAK7   A0A1U7TBL9   A0A218U8P7   A0A3M0JYN4   A0A1U7RBB5   A0A182UEI5   A0A2M4AY36   A0A3B4Y3P5   A0A3Q1GIA6   A0A3B4UY46   A0A3P8SRT6   A0A3Q1AW16   A0A0P5XQ53   A0A3Q0SZP2   H3ATB0   A0A3P9CBH7   L9KN19   K7FV34   A0A3P8X502  

Pubmed

26354079    22118469    23622113    28004739    26369729    29403074    + More
23537049    24845553    18362917    19820115    25765539    17204158    17510324    26483478    24945155    21292972    25576852    20566863    28797301    26830274    25474469    20353571    22216098    12364791    14747013    17210077    25244985    21993624    20920257    23761445    28087693    26108605    24402279    9215903    25186727    23385571    17381049    24487278   

EMBL

KQ459599    KPI94466.1    NWSH01002530    PCG68059.1    GDQN01009601    JAT81453.1    + More
ODYU01011926    SOQ57948.1    KQ460397    KPJ15208.1    AGBW02014681    OWR41203.1    GAIX01004135    JAA88425.1    GEZM01046190    JAV77441.1    LJIG01022816    KRT78566.1    GDAI01001423    JAI16180.1    PYGN01000041    PSN56494.1    APGK01035707    KB740928    KB632428    ENN77923.1    ERL95408.1    GECU01015401    JAS92305.1    KK852817    KDR15763.1    GECZ01017196    JAS52573.1    NEVH01009069    PNF33987.1    KQ971357    EFA08345.1    GEBQ01017346    GEBQ01006834    JAT22631.1    JAT33143.1    GANP01012710    JAB71758.1    GFDL01009647    JAV25398.1    GEFM01000369    JAP75427.1    GFDF01007525    JAV06559.1    AJWK01032290    GEDC01030270    GEDC01029212    GEDC01028250    GEDC01025261    GEDC01017357    GEDC01016560    GEDC01015241    GEDC01014382    GEDC01010107    GEDC01006038    GEDC01004245    GEDC01003930    GEDC01003444    JAS07028.1    JAS08086.1    JAS09048.1    JAS12037.1    JAS19941.1    JAS20738.1    JAS22057.1    JAS22916.1    JAS27191.1    JAS31260.1    JAS33053.1    JAS33368.1    JAS33854.1    DS231855    EDS38230.1    GDIP01144961    LRGB01001361    JAJ78441.1    KZS12521.1    GDIQ01001559    JAN93178.1    DQ440326    CH477708    ABF18359.1    EAT37032.1    EAT37033.1    EAT37034.1    GDIQ01005947    JAN88790.1    JXUM01000019    KQ560100    KXJ84575.1    GAPW01004015    JAC09583.1    GL732526    EFX88244.1    GACK01008127    JAA56907.1    DS235255    EEB14029.1    ABJB010694649    ABJB010886867    DS976103    EEC20261.1    GFPF01004676    MAA15822.1    GEDV01009410    JAP79147.1    GGMS01012396    MBY81599.1    GGLE01005615    MBY09741.1    GBBI01003370    JAC15342.1    GFWV01005479    MAA30209.1    ABLF02021686    EZ423935    ADD20211.1    AJVK01002878    JO844396    AEO36013.1    JXJN01006483    GFXV01005247    MBW17052.1    AXCN02002173    GDIP01017000    JAM86715.1    GGFJ01009233    MBW58374.1    GGFJ01009232    MBW58373.1    GGFK01011585    MBW44906.1    AAAB01008963    EAA12112.5    APCN01004857    KL447433    KFO73569.1    GGFM01004090    MBW24841.1    GABZ01007961    JAA45564.1    KK119940    KFM77112.1    LMAW01002893    KQK75965.1    AAPE02035900    AAPE02035901    ADMH02000457    ETN66415.1    GECZ01032396    JAS37373.1    GFFV01004345    JAV35600.1    KL217402    KFV77400.1    JRES01001410    KNC23147.1    KL218265    KFP03752.1    JW876674    AFP09191.1    MUZQ01000627    OWK50063.1    QRBI01000121    RMC06029.1    GGFK01012382    MBW45703.1    GDIP01068969    JAM34746.1    AFYH01118116    AFYH01118117    KB320760    ELW63879.1    AGCU01121518   

Proteomes

UP000053268    UP000218220    UP000053240    UP000007151    UP000192223    UP000245037    + More
UP000019118    UP000030742    UP000027135    UP000235965    UP000007266    UP000092461    UP000002320    UP000076858    UP000008820    UP000069940    UP000249989    UP000000305    UP000009046    UP000001555    UP000075884    UP000092445    UP000078200    UP000007819    UP000092462    UP000092460    UP000092443    UP000075880    UP000075886    UP000081671    UP000075903    UP000076407    UP000007062    UP000075840    UP000053760    UP000054359    UP000076408    UP000075920    UP000075900    UP000051836    UP000261640    UP000001074    UP000000673    UP000053875    UP000037069    UP000054308    UP000079721    UP000189704    UP000197619    UP000269221    UP000189705    UP000075902    UP000261360    UP000257200    UP000261420    UP000265080    UP000257160    UP000261340    UP000008672    UP000265160    UP000011518    UP000007267    UP000265120   

Pfam

PF10218   DUF2054

Interpro

IPR019352   UPF0454       

ProteinModelPortal

A0A194PM02   A0A2A4J860   A0A1E1W395   A0A2H1WY22   A0A194RBJ8   A0A212EI65   + More
S4PLA0   A0A1W4WNY4   A0A1Y1LWC4   A0A0T6AU47   A0A0K8TQK8   A0A2P8ZJ23   N6TJ81   A0A1B6IZF1   A0A067RAU7   A0A1B6FRD1   A0A2J7QZH5   D6WUY8   A0A1B6MB29   V5HE80   A0A1Q3FD30   A0A131Y979   A0A1L8DJA5   A0A1B0CWE5   A0A1B6E552   B0W7T6   A0A0N8AI72   A0A0P6ITS1   Q1HQW8   A0A0P6IHH6   A0A182GD98   A0A023EKB3   E9FXQ0   L7LZ59   E0VKX3   B7QN39   A0A224YPN3   A0A131YJL6   A0A2S2QV08   A0A182N127   A0A1B0AJ45   A0A1A9UHI3   A0A2R5LJR4   A0A023F1E2   A0A293LQN6   J9KLT2   D3TR83   A0A1B0D2V7   G3MR95   A0A1B0AZX6   A0A2H8TU07   A0A1A9XGK8   A0A182J7V5   A0A182QEM5   A0A0P6BCZ2   A0A2M4BZE3   A0A1S3F2K4   A0A182VDH3   A0A2M4BZA7   A0A2M4AVU1   A0A182XQ06   Q7Q4V7   A0A182HMQ4   A0A091FWR4   A0A2M3Z8L6   K9IYS9   A0A087UIC3   A0A182XYC1   A0A182VVG9   A0A182R244   A0A0Q3LZM0   A0A3Q3KZR5   G1PJC8   W5JU08   A0A1B6EHG9   A0A250XW47   A0A093HDC1   A0A0L0BSX7   A0A091I696   A0A1S3A3N3   V9LAK7   A0A1U7TBL9   A0A218U8P7   A0A3M0JYN4   A0A1U7RBB5   A0A182UEI5   A0A2M4AY36   A0A3B4Y3P5   A0A3Q1GIA6   A0A3B4UY46   A0A3P8SRT6   A0A3Q1AW16   A0A0P5XQ53   A0A3Q0SZP2   H3ATB0   A0A3P9CBH7   L9KN19   K7FV34   A0A3P8X502  

KEGG

101735941    no KO assigned | (RefSeq) UPF0454 protein C12orf49 homolog

GO

GO:0016021  

PANTHER

PTHR13481  

Length:

214

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.17324

Exp number, first 60 AAs:

20.17324

Total prob of N-in:

0.61811

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  43

outside

44  -  214

 

 

Pi

307.199211

Theta

208.319674

Tajima's D

1.498267

CLR

0

CSRT

0.787810609469527

Interpretation

Uncertain