Gene

KWMTBOMO04495

Pre Gene Modal

BGIBMGA005364

Annotation

PREDICTED:_uncharacterized_protein_LOC101744481_[Bombyx_mori]

Location

Bomo_Chr8(-):8115420-8120667      View in EpiBrowser

Full name

Protein singed wings 2      

Location in the cell

PlasmaMembrane   Reliability : 2.333

CDS

ATGCACGTGTTCTTGGGTCAGAATCCGTGGCGTTGTGACTGTCATTTCATACCCCGTTTTCAGGGACTCTTATTGAAGTACAAGAGGGTCATCAGGGATCTAACCGATATACGCTGCTCTAAGTCAAGCGATAAGAAAACATCGCTCGTACAAATCAGCACAATGCCACTCGGTAATGTTTGCAGCAATGAAACAGAGCTGGCAATTAGTCCGATTAACATTGTAAACATAGTTTTATTCGCATTAATAATGTTTATTCTAGCGGGCTAA

Protein

MHVFLGQNPWRCDCHFIPRFQGLLLKYKRVIRDLTDIRCSKSSDKKTSLVQISTMPLGNVCSNETELAISPINIVNIVLFALIMFILAG

Description

Has a role in the ecdysone induced cascade; probably indirect control of 'late' ecdysone genes.

Keywords

Complete proteome   Leucine-rich repeat   Reference proteome   Repeat   Signal  

Feature

chain  Protein singed wings 2

Uniprot

A0A1E1WKM4   A0A3S2LQ48   A0A2H1W280   A0A2A4JP72   A0A194QSA4   A0A194PN96   + More
A0A0L7LMV5   A0A067RDZ9   A0A2J7RDB6   N6TJ47   K7ITT9   A0A195D470   A0A151X3M6   A0A195EFW6   A0A1Y1L253   A0A232FC61   E2CA86   A0A1B0D980   A0A195BQ55   A0A158NTL5   A0A1B6J9N9   A0A1B6FAT0   A0A2S2QCJ1   U4UD10   F4WQY7   A0A1Y1L275   A0A1Y1L0R1   A0A026VZE6   A0A195ES17   A0A1B6L5F7   J9LS61   E0VKW4   A0A1Y1KUX9   A0A088A1A5   A0A1L8DBV2   A0A0A9XE94   A0A0T6BDG7   D6WW75   A0A3Q0JEZ7   A0A0C9RHM2   A0A0C9QRS9   A0A310SBV1   A0A0K8WAZ6   A0A0M9AAK0   A0A1W4V0B6   A0A034W0K2   A0A1W4VDX3   A0A0A1WJR8   A0A034VXX9   A0A1A9VQB0   B3MIE4   B3NML7   Q28Z47   B4MPP0   A0A0L0BNM4   B4KMX3   A0A0J9U4T0   B4HMZ0   A0A1I8NX06   Q8SXT3   A0A1I8NX04   A0A1I8NX07   A0A1I8NX38   A0A0L7R5S5   A0A3B0IZ72   B4GIA5   A0A1A9YCZ0   A0A0R1DSY4   B4P555   B4LNC5   A0A0Q9W3W9   A0A1B6EGL5   A0A1B6DM74   A0A0P5GJC2   A0A0P4YWW5   A0A0P5LKC5   A0A0N8C925   A0A0P5ZJL1   A0A0P5WG67   A0A0M3QUS8   A0A0P6C508   A0A1B0C1U0   A0A2P8XWD8   W8BWS6   A0A182JFK5   B4J8L4   A0A084WDB6   A0A336M0B6   A0A0P6H9E6   B0WXK8   A0A182SBK3   A0A182G2P0   Q174X8   A0A182FHP4   W5JLW4   A0NEC5  

Pubmed

26354079    26227816    24845553    23537049    20075255    28004739    + More
28648823    20798317    21347285    21719571    24508170    30249741    20566863    25401762    18362917    19820115    25348373    25830018    17994087    15632085    26108605    22936249    10731132    12537572    12537569    15189568    17550304    29403074    24495485    24438588    26483478    17510324    20920257    23761445    12364791    14747013    17210077   

EMBL

GDQN01003638    JAT87416.1    RSAL01000032    RVE51526.1    ODYU01005754    SOQ46932.1    + More
NWSH01000915    PCG73556.1    KQ461154    KPJ08403.1    KQ459599    KPI94463.1    JTDY01000535    KOB76760.1    KK852528    KDR21992.1    NEVH01005291    PNF38826.1    APGK01035612    KB740928    ENN77873.1    KQ976881    KYN07631.1    KQ982562    KYQ54860.1    KQ978983    KYN26762.1    GEZM01073287    GEZM01073281    JAV65187.1    NNAY01000490    OXU28028.1    GL453952    EFN75135.1    AJVK01004272    KQ976424    KYM88657.1    ADTU01026019    GECU01011814    JAS95892.1    GECZ01022477    JAS47292.1    GGMS01006262    MBY75465.1    KB632064    ERL88481.1    GL888275    EGI63500.1    GEZM01073284    GEZM01073280    JAV65207.1    GEZM01073283    GEZM01073282    JAV65196.1    KK107549    QOIP01000010    EZA49050.1    RLU17306.1    KQ981993    KYN30971.1    GEBQ01021092    JAT18885.1    ABLF02034555    DS235255    EEB14020.1    GEZM01073286    GEZM01073285    JAV65192.1    GFDF01010162    JAV03922.1    GBHO01025280    JAG18324.1    LJIG01001587    KRT85353.1    KQ971361    EFA09304.2    GBYB01006432    GBYB01006436    JAG76199.1    JAG76203.1    GBYB01006434    JAG76201.1    KQ764881    OAD54338.1    GDHF01004072    JAI48242.1    KQ435710    KOX79866.1    GAKP01011669    JAC47283.1    GBXI01015190    JAC99101.1    GAKP01011668    JAC47284.1    CH902619    EDV36992.2    CH954179    EDV54956.2    CM000071    EAL25768.3    CH963849    EDW74079.1    JRES01001589    KNC21690.1    CH933808    EDW09895.2    CM002911    KMY94655.1    CH480816    EDW48340.1    AE013599    AY084149    AAF57813.3    AAL89887.1    KQ414652    KOC66116.1    OUUW01000001    SPP73267.1    CH479183    EDW36225.1    CM000158    KRK00063.1    EDW91756.1    CH940648    EDW61077.2    KRF79763.1    GEDC01015292    GEDC01000212    JAS22006.1    JAS37086.1    GEDC01017727    GEDC01010524    JAS19571.1    JAS26774.1    GDIP01144302    GDIQ01246113    GDIQ01184678    LRGB01001005    JAJ79100.1    JAK05612.1    KZS14053.1    GDIP01225997    JAI97404.1    GDIQ01193269    JAK58456.1    GDIQ01102859    JAL48867.1    GDIP01042709    JAM61006.1    GDIP01099803    JAM03912.1    CP012524    ALC41189.1    GDIP01009083    JAM94632.1    JXJN01024172    PYGN01001247    PSN36318.1    GAMC01000795    JAC05761.1    CH916367    EDW01281.1    ATLV01022985    KE525339    KFB48210.1    UFQS01000257    UFQT01000257    SSX02072.1    SSX22449.1    GDIQ01034687    JAN60050.1    DS232168    EDS36538.1    JXUM01139872    KQ568969    KXJ68816.1    CH477404    EAT41653.1    ADMH02001054    ETN64293.1    AAAB01008960    EAU76444.2   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000037510    UP000027135    + More
UP000235965    UP000019118    UP000002358    UP000078542    UP000075809    UP000078492    UP000215335    UP000008237    UP000092462    UP000078540    UP000005205    UP000030742    UP000007755    UP000053097    UP000279307    UP000078541    UP000007819    UP000009046    UP000005203    UP000007266    UP000079169    UP000053105    UP000192221    UP000078200    UP000007801    UP000008711    UP000001819    UP000007798    UP000037069    UP000009192    UP000001292    UP000095300    UP000000803    UP000053825    UP000268350    UP000008744    UP000092443    UP000002282    UP000008792    UP000076858    UP000092553    UP000092460    UP000245037    UP000075880    UP000001070    UP000030765    UP000002320    UP000075901    UP000069940    UP000249989    UP000008820    UP000069272    UP000000673    UP000007062   

PRIDE

Q8SXT3   

Pfam

PF13855   LRR_8

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR000483   Cys-rich_flank_reg_C       
IPR000372   LRRNT       
IPR026091   HPS4       
IPR001190   SRCR       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A1E1WKM4   A0A3S2LQ48   A0A2H1W280   A0A2A4JP72   A0A194QSA4   A0A194PN96   + More
A0A0L7LMV5   A0A067RDZ9   A0A2J7RDB6   N6TJ47   K7ITT9   A0A195D470   A0A151X3M6   A0A195EFW6   A0A1Y1L253   A0A232FC61   E2CA86   A0A1B0D980   A0A195BQ55   A0A158NTL5   A0A1B6J9N9   A0A1B6FAT0   A0A2S2QCJ1   U4UD10   F4WQY7   A0A1Y1L275   A0A1Y1L0R1   A0A026VZE6   A0A195ES17   A0A1B6L5F7   J9LS61   E0VKW4   A0A1Y1KUX9   A0A088A1A5   A0A1L8DBV2   A0A0A9XE94   A0A0T6BDG7   D6WW75   A0A3Q0JEZ7   A0A0C9RHM2   A0A0C9QRS9   A0A310SBV1   A0A0K8WAZ6   A0A0M9AAK0   A0A1W4V0B6   A0A034W0K2   A0A1W4VDX3   A0A0A1WJR8   A0A034VXX9   A0A1A9VQB0   B3MIE4   B3NML7   Q28Z47   B4MPP0   A0A0L0BNM4   B4KMX3   A0A0J9U4T0   B4HMZ0   A0A1I8NX06   Q8SXT3   A0A1I8NX04   A0A1I8NX07   A0A1I8NX38   A0A0L7R5S5   A0A3B0IZ72   B4GIA5   A0A1A9YCZ0   A0A0R1DSY4   B4P555   B4LNC5   A0A0Q9W3W9   A0A1B6EGL5   A0A1B6DM74   A0A0P5GJC2   A0A0P4YWW5   A0A0P5LKC5   A0A0N8C925   A0A0P5ZJL1   A0A0P5WG67   A0A0M3QUS8   A0A0P6C508   A0A1B0C1U0   A0A2P8XWD8   W8BWS6   A0A182JFK5   B4J8L4   A0A084WDB6   A0A336M0B6   A0A0P6H9E6   B0WXK8   A0A182SBK3   A0A182G2P0   Q174X8   A0A182FHP4   W5JLW4   A0NEC5  

PDB

3TWI     E-value=0.0820525,     Score=77

KEGG

101744481    no KO assigned | (RefSeq) uncharacterized LOC101744481

GO

GO:0016021   GO:0035073   GO:0035556   GO:0035075   GO:0005044  

PANTHER

PTHR14407  

Length:

89

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.78442

Exp number, first 60 AAs:

0.00323

Total prob of N-in:

0.25961

outside

1  -  64

TMhelix

65  -  87

inside

88  -  89

 

 

Pi

202.844071

Theta

180.050386

Tajima's D

0.815446

CLR

1.782642

CSRT

0.606519674016299

Interpretation

Uncertain