SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04487
Pre Gene Modal
BGIBMGA005442
Annotation
UDP-glycosyltransferase_UGT39C1_precursor_[Bombyx_mori]
Full name
UDP-glucuronosyltransferase      
Location in the cell
PlasmaMembrane   Reliability : 2.103
 

Sequence

CDS
ATGTGGCAACTAGAAATCCTTTACAATTGGCTACAGGAACTAGTAGAAAAATACGTTCCAAATTTGCCTCAGCCATCTCCGAGCCTTTATGAACTACAGCAGAATGTTTCTTTGTATCTTATGAACACACATTTTAGTTTCGATCCTCCTGCTGCTTATTTGCCCAATTTTATTGAAATCGGCGGTATTCATCTGAATGAAGAAGTCGAAAAACTACCACAAGACATCCAAAGAATATTAGACGAAGCAAGCAATGGAGTTGTGTATGTAAATTTTGGATCTAATATTAAGAGTTCAGAATTGCCTATTGAAAAGAAGAATGCGCTAATCAACGTATTTAAGAGCTTAAACCAAACGGTGCTATGGAAATGGGAAGACGACAATTTTGGCAACCAAACTGCTAACATTAAGACGCGAAAATGGCTGCCACAAAACGAAATCTTAGCTCACCAAAATGTGAGAATATTTATATCACACGGTGGTTTAATGGGAACCATTGAAGCAATTTTCCACGGAGTTCCCATTATTGGCATTCCATTGTTCGGAGATCAATACAATAACCTACTACAAGTAGAAAATGCAGGATCTGGTATCATTCTTGAATATCACAACTTAAATGAAAACAATATGCGTTCTCTGATAAACCATGTTCTCAGTGATGAAAAGTACAAAAATAATGCTAGAGAACTATCGATAAGGTTTAGAGATAGACCAATTAAGGCTCTAGACGCTGCAATGTATTGGATCGAATACGTTATAAGACACAAAGGCGCTCATTTCATGAAAAATCCCGCATTAAAATTGAATTGGTTTGCCTACAACATGTATGATGTTTATCTTTTCATTTTATGTGTACTTATAATTAGCGTGTACGTAAGTTATAGATGTTTAAAGGTTTTAGTTTATTTTCGTATAAATACAAAGTTCGATAGAAAATTGTGTGGGAAAGTTAAATTTCAATAA
Protein
MWQLEILYNWLQELVEKYVPNLPQPSPSLYELQQNVSLYLMNTHFSFDPPAAYLPNFIEIGGIHLNEEVEKLPQDIQRILDEASNGVVYVNFGSNIKSSELPIEKKNALINVFKSLNQTVLWKWEDDNFGNQTANIKTRKWLPQNEILAHQNVRIFISHGGLMGTIEAIFHGVPIIGIPLFGDQYNNLLQVENAGSGIILEYHNLNENNMRSLINHVLSDEKYKNNARELSIRFRDRPIKALDAAMYWIEYVIRHKGAHFMKNPALKLNWFAYNMYDVYLFILCVLIISVYVSYRCLKVLVYFRINTKFDRKLCGKVKFQ

Summary

Catalytic Activity
glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + H(+) + UDP
Similarity
Belongs to the UDP-glycosyltransferase family.
Belongs to the ubiquitin-conjugating enzyme family.
Feature
chain  UDP-glucuronosyltransferase
EC Number
2.4.1.17
EMBL
JQ070246    AEW43162.1    BABH01013714    ODYU01006427    SOQ48259.1    KU680293    + More
ANI21999.1    JQ070245    AEW43161.1    NWSH01000322    PCG77489.1    RSAL01000196    RVE44553.1    JQ070206    AEW43122.1    KQ461154    KPJ08408.1    KY202931    AUC64275.1    AGBW02007908    OWR54430.1    GEYN01000086    JAV02043.1    KQ459599    KPI94459.1    GQ915326    ACZ97420.2    AGBW02014796    OWR41057.1    KY202935    AUC64279.1    AXCM01005982    GGFJ01004214    MBW53355.1    GGFJ01004173    MBW53314.1    GGFJ01004216    MBW53357.1    APCN01003712    AAAB01008807    EAA03993.4    GGFM01002198    MBW22949.1    UFQS01000048    UFQT01000048    SSW98571.1    SSX18957.1    GGFM01002441    MBW23192.1    ADMH02001746    ETN61209.1    AXCN02000438    ATLV01024094    KE525349    KFB50598.1    GGFK01006656    MBW39977.1    GGFK01006354    MBW39675.1    AJVK01013380    GGFK01006565    MBW39886.1    GALX01004658    JAB63808.1    GFDL01001981    JAV33064.1    CH477262    EAT45644.1    JXUM01017315    KQ560480    KXJ82204.1    JXUM01046260    KQ561468    KXJ78484.1    AJWK01009317    AJWK01009318    GALX01004659    JAB63807.1    GFDL01004778    JAV30267.1    GFDL01001967    JAV33078.1    EAT45643.1    NEVH01007402    PNF35837.1    DS231867    EDS40643.1    GALX01004660    JAB63806.1    CH477659    EAT37651.1    PNF35871.1    GFDL01005087    JAV29958.1    GEZM01017163    JAV90862.1    EAT37649.1    JXUM01038022    KQ561151    KXJ79545.1    CH477220    EAT47358.1    JXUM01038023    KXJ79546.1    AJVK01013379    UFQT01000126    SSX20505.1    KC118981    AGC84403.1    GEZM01007277    JAV95265.1    GAPW01000969    JAC12629.1    GEZM01017166    JAV90859.1    DQ440116    ABF18149.1    GGFL01002422    MBW66600.1    CH940650    EDW66951.1    KA645990    AFP60619.1    GEZM01055230    JAV73082.1    APCN01000032    JXUM01021599    KQ560606    KXJ81644.1    GFDL01005243    JAV29802.1    GEHC01000199    JAV47446.1    AAAB01008960    PNF35872.1    MF787212    AWX49640.1    AJVK01013381    GFDF01001625    JAV12459.1    EAA11593.4    ADMH02000091    ETN67850.1    NEVH01019069    PNF23045.1   
Pfam
PF00201   UDPGT        + More
PF00179   UQ_con
PF04101   Glyco_tran_28_C
Interpro
IPR002213   UDP_glucos_trans        + More
IPR035595   UDP_glycos_trans_CS       
IPR023313   UBQ-conjugating_AS       
IPR000608   UBQ-conjugat_E2       
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR007235   Glyco_trans_28_C       
SUPFAM
SSF54495   SSF54495       
Gene 3D
PDB
2O6L     E-value=1.80181e-25,     Score=287

Ontologies

Topology

Subcellular location
Membrane  
Length:
320
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
32.87868
Exp number, first 60 AAs:
0.00711
Total prob of N-in:
0.46196
outside
1  -  269
TMhelix
270  -  292
inside
293  -  320
 
 

Population Genetic Test Statistics

Pi
42.524394
Theta
31.584018
Tajima's D
1.296613
CLR
0.276507
CSRT
0.737163141842908
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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