Gene

KWMTBOMO04482

Pre Gene Modal

BGIBMGA005440

Annotation

PREDICTED:_serine/arginine_repetitive_matrix_protein_1_[Bombyx_mori]

Location

Bomo_Chr8(+):7466333-7483550      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.113

CDS

ATGGTGACTGTATTTACGTTGAGTGAACATGGCGCCATCAAGCGACGGCCACGTGTACTATTACGATTTATTTCGCCAGCACCCGAACACGGGTACGAGTTTTATAGTTTAGGCTACTCGGCTGAGCCCGGAGACACTATTGCTACAACCAAAGAAGAAGAATGGGTGACTCGTAAAACAAGTGAAGTCACAACGACCCGGCAGATAGAGACAAGGGTCAAACGTGAACTAATATTAGAAGACGGACGCATCCTGAGTGATTCTGGGCCGAAGATATCTACGTCAGTCAACGAGGACACGCACACCACTAATTTACAACAGACTGAACATCGCGTTCCAGAAGGCCAAAATGATAATGCCGCTTCAACAACAAAGATTGATGGAGCTATTGGAGCACCCGCTGATGAAGTGGACGGACTTCAAACGATCGTCGGTGAAGTGTCACCCGCTGGAGCAAAAGTCTTGGTTTCGTCGAGCGTTGTTGCTAACCCTGATGGTAAGGTCAGGGAGAGCCATGACCTTCGCGTGCTCACGAGGAACATAACCGAACGAGTGAAAGAGACGGAAGAGCGGATACACAAAGGGGATACAACACATGAGGTAAGTTTAAAATTAATTGCATTATAG

Protein

MVTVFTLSEHGAIKRRPRVLLRFISPAPEHGYEFYSLGYSAEPGDTIATTKEEEWVTRKTSEVTTTRQIETRVKRELILEDGRILSDSGPKISTSVNEDTHTTNLQQTEHRVPEGQNDNAASTTKIDGAIGAPADEVDGLQTIVGEVSPAGAKVLVSSSVVANPDGKVRESHDLRVLTRNITERVKETEERIHKGDTTHEVSLKLIAL

Uniprot

H9J7E8   A0A2A4JP54   A0A2H1W9P7   A0A0L7LVN2   A0A194QXV8   A0A212EXL2   + More
A0A2A4JP86   A0A3S2NI64   A0A194PLZ4   A0A0T6AWB6   A0A1Y1LZ97   A0A1Y1LZ28   A0A034V9U7   A0A034V7L6   A0A0K8U1F1   A0A0K8VKF1   A0A1W4V856   A0A1W4UVC7   A0A0R3P2T7   B5DKM3   A0A0R1EJL6   B4Q2J1   X2JE77   Q9VX26   Q7YU70   A0A1I8PTP1   A0A3B0JTB2   A0A1I8PTJ9   A0A1Q3FNP9   A0A0L0BNK4   T1PD69   A0A1I8MBU8   B4JKB6   A0A1Q3FP22   B3MQV4   A0A0P8XJS2   A0A0A1WR74   A0A1Q3FP46   A0A139WDV8   D6WV40   A0A1J1HW54   A0A1B6CPZ7   B4IF38   B4L7V5   B4MA00   A0A182IJL5   A0A1A9WAP7   A0A226DL58   A0A182UFB4   B4N206   A0A182Y7R2   A0A1A9ZQD7   A0A182FM93   A0A0M4EJN1   A0A182L2S6   W8AF41   A0A182T9Y1   A0A182VKD1   A0A1D2MY78   A0A1B0BDF1   A0A1A9YJ71   A0A182G4E4   A0A182MI72   A0A182QQF7   A0A336LXL8   A0A3R7M883   A0A310SGS7   A0A2M4D031   A0A2M4CWU0   A0A2M4CN08   K7J1T9   A0A232F7V4   A0A0C9RMQ3   A0A0C9Q0W2   A0A1B0DHE9  

Pubmed

19121390    26227816    26354079    22118469    28004739    25348373    + More
15632085    17994087    23185243    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    25315136    25830018    18362917    19820115    18057021    25244985    20966253    24495485    27289101    26483478    20075255    28648823   

EMBL

BABH01013701    BABH01013702    NWSH01000986    PCG73233.1    ODYU01007200    SOQ49767.1    + More
JTDY01000006    KOB79495.1    KQ461154    KPJ08411.1    AGBW02011725    OWR46230.1    PCG73232.1    RSAL01000088    RVE48207.1    KQ459599    KPI94456.1    LJIG01022713    KRT79102.1    GEZM01043723    JAV78883.1    GEZM01043722    JAV78884.1    GAKP01019678    GAKP01019677    JAC39274.1    GAKP01019676    JAC39276.1    GDHF01031740    JAI20574.1    GDHF01012965    JAI39349.1    CH379063    KRT05933.1    EDY72073.1    KRT05932.1    CM000162    KRK06870.1    KRK06871.1    EDX02632.1    KRK06869.1    AE014298    AHN59851.1    AAF48755.2    AHN59850.1    BT009960    AAQ22429.1    OUUW01000003    SPP78700.1    GFDL01005858    JAV29187.1    JRES01001701    KNC20834.1    KA646624    AFP61253.1    CH916370    EDW00019.1    GFDL01005710    JAV29335.1    CH902622    EDV34159.1    KPU75002.1    GBXI01012733    JAD01559.1    GFDL01005675    JAV29370.1    KQ971357    KYB26130.1    EFA08533.2    CVRI01000025    CRK92319.1    GEDC01021726    JAS15572.1    CH480832    EDW46292.1    CH933814    EDW05530.2    KRG07427.1    CH940655    EDW66059.2    LNIX01000017    OXA45574.1    CH963925    EDW78395.1    CP012528    ALC49391.1    GAMC01019695    GAMC01019694    GAMC01019693    JAB86860.1    LJIJ01000390    ODM98003.1    JXJN01012458    JXUM01041966    JXUM01041967    KQ561305    KXJ79055.1    AXCM01004191    AXCN02002166    UFQT01000277    SSX22675.1    QCYY01001852    ROT74736.1    KQ764881    OAD54343.1    GGFL01006290    MBW70468.1    GGFL01005609    MBW69787.1    GGFL01002403    MBW66581.1    NNAY01000698    OXU26921.1    GBYB01009650    JAG79417.1    GBYB01007548    JAG77315.1    AJVK01061027   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000283053    + More
UP000053268    UP000192221    UP000001819    UP000002282    UP000000803    UP000095300    UP000268350    UP000037069    UP000095301    UP000001070    UP000007801    UP000007266    UP000183832    UP000001292    UP000009192    UP000008792    UP000075880    UP000091820    UP000198287    UP000075902    UP000007798    UP000076408    UP000092445    UP000069272    UP000092553    UP000075882    UP000075901    UP000075903    UP000094527    UP000092460    UP000092443    UP000069940    UP000249989    UP000075883    UP000075886    UP000283509    UP000002358    UP000215335    UP000092462   

PRIDE

H9J7E8    X2JE77    Q9VX26    Q7YU70   

ProteinModelPortal

H9J7E8   A0A2A4JP54   A0A2H1W9P7   A0A0L7LVN2   A0A194QXV8   A0A212EXL2   + More
A0A2A4JP86   A0A3S2NI64   A0A194PLZ4   A0A0T6AWB6   A0A1Y1LZ97   A0A1Y1LZ28   A0A034V9U7   A0A034V7L6   A0A0K8U1F1   A0A0K8VKF1   A0A1W4V856   A0A1W4UVC7   A0A0R3P2T7   B5DKM3   A0A0R1EJL6   B4Q2J1   X2JE77   Q9VX26   Q7YU70   A0A1I8PTP1   A0A3B0JTB2   A0A1I8PTJ9   A0A1Q3FNP9   A0A0L0BNK4   T1PD69   A0A1I8MBU8   B4JKB6   A0A1Q3FP22   B3MQV4   A0A0P8XJS2   A0A0A1WR74   A0A1Q3FP46   A0A139WDV8   D6WV40   A0A1J1HW54   A0A1B6CPZ7   B4IF38   B4L7V5   B4MA00   A0A182IJL5   A0A1A9WAP7   A0A226DL58   A0A182UFB4   B4N206   A0A182Y7R2   A0A1A9ZQD7   A0A182FM93   A0A0M4EJN1   A0A182L2S6   W8AF41   A0A182T9Y1   A0A182VKD1   A0A1D2MY78   A0A1B0BDF1   A0A1A9YJ71   A0A182G4E4   A0A182MI72   A0A182QQF7   A0A336LXL8   A0A3R7M883   A0A310SGS7   A0A2M4D031   A0A2M4CWU0   A0A2M4CN08   K7J1T9   A0A232F7V4   A0A0C9RMQ3   A0A0C9Q0W2   A0A1B0DHE9  

KEGG

101747091    no KO assigned | (RefSeq) serine/arginine repetitive matrix protein 1

GO

GO:0005927   GO:0048104   GO:0016324   GO:0003700   GO:0008270   GO:0016301  

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00168

Exp number, first 60 AAs:

0.00145

Total prob of N-in:

0.03993

outside

1  -  208

 

 

Pi

231.911325

Theta

153.445724

Tajima's D

-0.712484

CLR

1547.703251

CSRT

0.19814009299535

Interpretation

Uncertain