SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04477  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005438
Annotation
ribonucleic_acid_binding_protein_S1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.023
 

Sequence

CDS
ATGTTTCATTTCAATACCAGGGCTAGAAATAAATCGCCTTTGCCTGCAGCTGAGAAAGAGAAGAAGAAACCCAAAGAAAGCAAGAAAAAGAAAGGTGACTCAGGCTCCAGCAGCAGTGATAGTAGTGGAAGTTCATCAAGTAGTTCTTCAAGGTCATCCTCTCGGTCATCATCCAGTAGCTCAGGAAGTTCATCACGTTCATCTTCATCATCCAGCTCATCTAGCAGTAGCAGCAGTAACAATGGCCGTTCAAGGCCTAAGAAAAAAACAATTTCACCAAACAAGAGTCCACTTAAAGATCGTCGTGATGCTGATCGGGAGAAGATTAGAGATAGATCACCAACAGGAGAAAAAAAAAAATCTGTGTTACCTTTATCAAATGACAAAGCTAAAATTAAGGAAAAACAGGAACGATCTCCAGGACGTAAGAAGCGAGAACGCTCACCACCACCACGACCAACTCGTATCCACATTGGACGACTGACTTTAAATGTAACGCGTGATCACATCCATGAAATATTTTCGACATATGGTACTGTGAAATCAATTGAGTTTCCTATGGACCGACTTCACCCACATAATGGAAGAGGATACGCATATGTTGAGTTTAATAATGCTGATGAAGCAGAAAATGCTATGAAGCACATGGACGGGGGTCAGATCGACGGACAAGAGATAACGGCGGCGCCTGTGCTGGTTCCGTCACGACCGCGCAGATCGTCGCCTCGACCGCTACCACCTCGACATGGACCTCGCCGTCATTCCCCACCGAGGTATCGCCGACGCAGTCCTCCGGTCCGTCGTCGTTCACCGCCGCGCCGGCGCCGCTCTCGGTCCCGGTCACCGCGCCCTGCCACCCGCCGACGCCGCTCCAGATCCAATGATCCTGCTCCTAAATCCAAGGATTCCCAAAATCTTTAA
Protein
MFHFNTRARNKSPLPAAEKEKKKPKESKKKKGDSGSSSSDSSGSSSSSSSRSSSRSSSSSSGSSSRSSSSSSSSSSSSSNNGRSRPKKKTISPNKSPLKDRRDADREKIRDRSPTGEKKKSVLPLSNDKAKIKEKQERSPGRKKRERSPPPRPTRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEITAAPVLVPSRPRRSSPRPLPPRHGPRRHSPPRYRRRSPPVRRRSPPRRRRSRSRSPRPATRRRRSRSNDPAPKSKDSQNL

Summary

Uniprot
ProteinModelPortal
PDB
4A8X     E-value=5.18773e-27,     Score=300

Ontologies

Topology

Length:
306
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06754
outside
1  -  306
 
 

Population Genetic Test Statistics

Pi
169.160321
Theta
178.609593
Tajima's D
-1.31311
CLR
0.335611
CSRT
0.0870456477176141
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 DHIHEIFSTYGTVK 100.00 7e-06
26822097 IIRPYYQK 100.00 7e-04
26280517 DHHSAQFANIVDIAGMDVPSR 100.00 7e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号