SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04466
Pre Gene Modal
BGIBMGA005433
Annotation
PREDICTED:_acetyl-coenzyme_A_transporter_1_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.885
 

Sequence

CDS
ATGACTTTAACAAAGCGCAAAAATTCACCGGAAAATGAGGAATTGATTGAAAACGGAGACGCGCCGAACGAAGGAAGAAGTAACATTAAAGGGGATGAACTAAACATAGCTGTTTTGTTGTTCCTATACACATTACAGGGTATACCACTGGGATTAGCTGGAGCTGTCCCAATGCTTTTACAAAATAAAGGCATAACGTACACGCAACAAGCTGAATTTAGTTTAGTAAATTGGCCCTTTAGTGTAAAACTATTATGGGCTCCTATAGTGGATGCAATGTTTTGGCCTGAATTTGGAAGAAGAAAAACTTGGCTTGTACCCGTCCAGTACTTGATTGGAATAGTAATGATTATAGTATCATATTGTGTCACAGATTGGCTGGGAATTGATGGGGAACCACCTTCAATGACAATACTTACAGTATCTTTTCTGTTATTAAATTTTTTAGCGGCCACACAAGATATTGCTGTTGATGGCTGGGCTTTGACTATGTTGAAAAGGTGTAATGTTGGACATGCCTCGACATGTAATACAGTAGGCCAAACAGCTGGGTTTTTTTTGGGATATGTAATGTTTCTGGCTCTCGAGTCTCCATATTTCTGCAACAAATATTTACGAACAGAACCACAGGAGACTGGACTAGTGACTCTGTCAAGTTTTCTACTATTTTGGGGTTGGATTTTCATTATAACGACTACATTCATAGCTATATTTAAACATGAAGCTAATGATACCAGTGCAAGTGGTCAGGTGAAGGGAGGAAATGATATTGTTAGTGCTTACAAACAGTTGTATACAATTGTGAAATTACCAGCAGTGCGTAAATTAGCTTTGGTTCTGTTCACTGCTAAGCTTGGTTTTTGTGCGGCAGATGCAGTATCAGGCTTGAAGCTTGTTGAAGCCGGTGTCCCACGTGAAGATTTAGCTTTACTGGCTGTACCTTTGGTACCAGTACAGATCATAATGCCAGTTATTTTGGCTAAACACACAACAGGACCAGCCCCACTGTCTCTTTGGTTAAAGGCTTTCCCATTGAGGCTACTGGTTGGTCCTCTAGCGGCAGCCCTTGTAGCCTTCACACCAACACTGCTTGGTGACTCTGGACCTTCATACTCCTATCTAAGCATACTCATGTTACTGTATGTCTTTCATCAGACATGCCTCTACTGTATGTTTGTGGCGGTGATGGCATTCTTTGCAAAAGTATCTGATCCAACGGTTGGTGGTACATATATGACATTGTTAAACACCGTTTCTAACCTTGGAACCAACTGGCCCAGCACTTTAGCGCTCTGGGCTATTGATCACTTGACGTACAAAAGCTGCTCACTATCTAAGTTGACCGACAACAAATGCTCCTCAACAGTTGAAGCTGAATTATGTAAATCAGAAGGCGGCACCTGCGTCACTGAAATCGATGGGTACTACATAGAAACTGTTATATGTGTTATCCTCGGCTTCTTATGGTTGCAGTGGGGTCGACCCACCATCAACAGGTTACAGCGACTGCCTCCGTCGGCGTGGCAGATAAGCCGTTACCACAGATAA
Protein
MTLTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGEPPSMTILTVSFLLLNFLAATQDIAVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGYVMFLALESPYFCNKYLRTEPQETGLVTLSSFLLFWGWIFIITTTFIAIFKHEANDTSASGQVKGGNDIVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDLALLAVPLVPVQIIMPVILAKHTTGPAPLSLWLKAFPLRLLVGPLAAALVAFTPTLLGDSGPSYSYLSILMLLYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAIDHLTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRPTINRLQRLPPSAWQISRYHR

Summary

EMBL
BABH01013669    BABH01013670    NWSH01000327    PCG77414.1    ODYU01006801    SOQ48989.1    + More
AGBW02008899    OWR52234.1    KQ459599    KPI94436.1    KQ461154    KPJ08428.1    RSAL01000088    RVE48221.1    JTDY01001897    KOB72596.1    GEZM01028108    JAV86460.1    LJIG01009534    KRT82887.1    CH477239    EAT46481.1    GL444701    EFN60667.1    KQ971362    EFA08955.1    KK107079    EZA60169.1    QOIP01000010    RLU17402.1    GFDL01011146    JAV23899.1    GL450241    EFN81289.1    NNAY01002247    OXU21731.1    KQ976750    KYN08682.1    KQ982893    KYQ49559.1    GFDL01010821    JAV24224.1    KK853329    KDR08429.1    KQ976514    KYM82312.1    KQ982011    KYN30674.1    ADTU01014563    ADTU01014564    JXUM01122302    KQ566589    KXJ69992.1    JXUM01062797    KQ562216    KXJ76381.1    GL888528    EGI59788.1    GL765555    EFZ16132.1    AJWK01004791    DS231843    EDS35504.1    KQ980662    KYN14671.1    GANO01002304    JAB57567.1    GEDC01026261    GEDC01020778    GEDC01018602    JAS11037.1    JAS16520.1    JAS18696.1    KQ435700    KOX80453.1    KZ288334    PBC27880.1    APGK01057007    APGK01057008    KB741277    ENN71246.1    KB631850    ERL86711.1    KQ434890    KZC10463.1    KQ414646    KOC66410.1    UFQS01000040    UFQT01000040    SSW98148.1    SSX18534.1    ATLV01019208    KE525264    KFB43939.1    AAAB01008807    EAA04722.4    AXCN02000558    APCN01003693    AXCM01000934    GFDF01009175    JAV04909.1    GFDF01009174    JAV04910.1    ADMH02000413    ETN66626.1    AAGJ04022096    AHAT01022644    JXJN01024608    GBXI01008669    JAD05623.1    GDIQ01010016    JAN84721.1    GGFK01004500    MBW37821.1    CCAG010022578    GGFJ01004148    MBW53289.1    GDIP01173572    JAJ49830.1    GDIP01014170    JAM89545.1    GGFJ01004147    MBW53288.1    GDIQ01249598    JAK02127.1    GGFJ01004146    MBW53287.1    GDIQ01062906    JAN31831.1    DS235813    EEB17486.1    GAKP01015736    JAC43216.1    GDIP01059452    JAM44263.1    GFDF01009325    JAV04759.1    GDIP01014169    JAM89546.1    GDIQ01082795    JAN11942.1    GDHF01027523    GDHF01004054    JAI24791.1    JAI48260.1    GDAI01000906    JAI16697.1    GDIP01123998    JAL79716.1    HADW01004787    HADX01006444    SBP28676.1    GAMC01005929    JAC00627.1    HAEI01005162    SBR92050.1    GGFM01004398    MBW25149.1    HAAD01005956    CDG72188.1    HAEH01002442    SBR68932.1   
Pfam
PF13000   Acatn
Interpro
IPR036259   MFS_trans_sf        + More
IPR004752   AmpG_permease/AT-1       
IPR024371   AcetylCoA_trans_1-like       
IPR020846   MFS_dom       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
515
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
223.40347
Exp number, first 60 AAs:
22.29727
Total prob of N-in:
0.74136
POSSIBLE N-term signal
sequence
inside
1  -  35
TMhelix
36  -  58
outside
59  -  72
TMhelix
73  -  95
inside
96  -  106
TMhelix
107  -  129
outside
130  -  132
TMhelix
133  -  152
inside
153  -  172
TMhelix
173  -  195
outside
196  -  214
TMhelix
215  -  237
inside
238  -  307
TMhelix
308  -  327
outside
328  -  341
TMhelix
342  -  364
inside
365  -  376
TMhelix
377  -  399
outside
400  -  473
TMhelix
474  -  493
inside
494  -  515
 
 

Population Genetic Test Statistics

Pi
235.006827
Theta
157.708417
Tajima's D
-1.072924
CLR
168.975912
CSRT
0.128443577821109
Interpretation
Uncertain
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