Gene

KWMTBOMO04464

Pre Gene Modal

BGIBMGA005432

Annotation

PREDICTED:_uncharacterized_protein_LOC105842449_[Bombyx_mori]

Location

Bomo_Chr8(+):7095345-7106081      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.886

CDS

ATGTCTTCTGAACAACATAAAGAGAGTAGAATGAGTAGCACCCTGAGTGCCCTTGGCGGTGGCGAGGCGTGTGGTGCGCGATGGACCCTGGGTGCTCTGCTCCTTGCTCCTCTTGCAGCAGCAAACTCCAGTTATTGCGCTGTACCCGCTATTATTCTGTTATCTGCTTTCGCAGTCATTGCCACTTTAACATGTAAAGACCTTAAAAAGCTAGCAGAAATTCTTCCGCCACCGAAAACTGTGAGAGGGAGACGCGAAAGGAATCTGCGTTCCTTTGCCGATTTTATGGCAATGTGGATGACATTTCTATCACATTTGGTAGCAGTAGCTATATGTGCGAGGATATTAAGTGCAACTGCCGATCATGTTACCGGAGGTCGCACCCGACGATGGTTATTCGGGTATGAAACGAGAGCCCTGGGAGAACCATGGCCTGATGTACTGGGAGTGACCGTGGTGATCGTCGTCTGTGCTATGTTCATGTGTGGACTGGAAGAAAGTATGATGTTCACGTTCATGTTATTGATACTCCTGTATATATTCAGTCAATTTTTCGCCATATTTGGACTTATAAATCTAGATATCGCCAATATAAATATGCCTATTCCTATATCCATTTATGAGCTTTTTGCAGCAGGTTCGCCGGTTTGCTACGCTTTTAGTGTTGTTTTACCAAAAGAAAGTGGAACTCTTAAGAAAAAAATGTTCTTGACAACAGGATTGCCTGCAATAGTTTTAACGGGGTTATGTTTTCTATACACCAACATGTTAAAAGGGAGCAGTGTTGACGCCGCTCTACCTATTACGACACTGGTCGAGGCAAGAAGTGCGGGTTGGGTGTGTCCCGTACTAGCTGCCGTCACTGTAGCAGGAGTATGTCTTTCTTTGACAGAACTATGTCCTTTACTTTTCACAGTATTGGTAGCTTTAGCATCACCAGAGTGGAAGGTTCTGACTAGATCAATGACGTACGAAAGTACTTCGACTGGGAGTCCGGTCCTAGCGGTTTTCACGGCCGGAAGTCTGGCAGCTATACTGGCATTCGCTTGTCCGTTGTCTCACATGATTACTCTTATGAACGCAAGTCACTTACTTAGTATCTCTATCCAAGCGTTCCATCTTATGGTTATGCGTTGTGTACCGACACTTGAACAAAAGGAGGCTGGCGACGTAGAGTACAAACGCCTGGGAAGAGATGCTGCTCCTCGTGGATCTAAATCAACATCTAGTAGAGGCAGAGGTAGTTTATGGTTCATCCCTTCCGCTATACGACACACTAAGACTCTTGAAAGCATTAAGTCAAAAGTAATTTCAAAAGAAACAGAAGATCGAGAATGCCTTCTGTTAGATGAATATGCGGGCTGTCCTTCAGAAGATCCAATCTCTTGTAGCAGTGGTACTAGAAAAATTGCAACAGAGGACTTGGATGTCGTACCTTCAGACGCCGAAGCGAGCGAAGGAGAAATTACCTCAGGAGATGATTCTACCGACATTGATGCAGTTGTTAAAGAGTATAGAGATAGAATACAGGTTGTAACATCAATACCGGAAGCGAGTGCGCCTTCTCCTCCATGTGCGCGAGGTGCACGATGGTCTGCAGCAGGTGCACTGATTCAAATTGTAGCCGACGCATTCCTGGCCGCTGGTTTTTGCAGTCAAGATATTAGACTACCAATGTTCGCCACTGGACTACCACTTTGGATATGTGGCACCTTTATATGCATGTATCAACCATCTCATAAGTTAGGGATGAGTAAAATTCAGTACATTCAAGGGCCATTAACGATGACGACAGCTTTACTCTTTCTGACACCGCTCCTTTTAGATTCCTGGCCAGCTATTACTCTTTTCGCGGGAGCAGGTGTGGTAATATACGCTCGCTGTGAACGCTGGTGCGGGGACCTTGCAGTGCAACAAGCCCGTAGTGCCATAGAGCGACGCAAGCTGCGACACGTCGCCTCCACAGTGCCTCTCACCGGTGCTCGGCTTGCGCATATAGATACTGTATTTATAACCAGATGA

Protein

MSSEQHKESRMSSTLSALGGGEACGARWTLGALLLAPLAAANSSYCAVPAIILLSAFAVIATLTCKDLKKLAEILPPPKTVRGRRERNLRSFADFMAMWMTFLSHLVAVAICARILSATADHVTGGRTRRWLFGYETRALGEPWPDVLGVTVVIVVCAMFMCGLEESMMFTFMLLILLYIFSQFFAIFGLINLDIANINMPIPISIYELFAAGSPVCYAFSVVLPKESGTLKKKMFLTTGLPAIVLTGLCFLYTNMLKGSSVDAALPITTLVEARSAGWVCPVLAAVTVAGVCLSLTELCPLLFTVLVALASPEWKVLTRSMTYESTSTGSPVLAVFTAGSLAAILAFACPLSHMITLMNASHLLSISIQAFHLMVMRCVPTLEQKEAGDVEYKRLGRDAAPRGSKSTSSRGRGSLWFIPSAIRHTKTLESIKSKVISKETEDRECLLLDEYAGCPSEDPISCSSGTRKIATEDLDVVPSDAEASEGEITSGDDSTDIDAVVKEYRDRIQVVTSIPEASAPSPPCARGARWSAAGALIQIVADAFLAAGFCSQDIRLPMFATGLPLWICGTFICMYQPSHKLGMSKIQYIQGPLTMTTALLFLTPLLLDSWPAITLFAGAGVVIYARCERWCGDLAVQQARSAIERRKLRHVASTVPLTGARLAHIDTVFITR

Uniprot

A0A2A4JZH2   A0A3S2L0R7   H9J7E0   A0A2H1WKA4   A0A194QTV6   A0A194PNW1   + More
A0A212F377   A0A0L7L282   A0A212FER7   Q175L9   A0A1I8Q150   B4LUM2   B4KKZ8   A0A1I8N1B1   W8AFX6   A0A1B0FK99   A0A3B0K7X4   A0A3B0KEU8   A0A1A9ZPV9   A0A0L0C6B5   A0A0J9R4R9   A0A1A9V8Z5   Q7JRK8   Q9VIG5   A0A1B0B8X5   Q9I7L6   A0A1A9Y5R7   A0A1W4UW75   Q29NR6   A0A084VPC5   A0A1B0CGS3   B4P707   B3NKV7   B3MU62   A0A1A9WZU4   A0A034W159   A0A0K8W2K2   A0A182VV13   A0A0K8U756   T1PC00   A0A182FSL7   A0A182IE20   A0A182RGG8   A0A182VK57   A0A0A1XF02   B4MZT8   A0A182P948   A0A1S4H1C3   A0A182MPR0   A0A1B0D383   A0A182L5Q2   A0A182QSR2   A0A182NEC7   A0A336MG81   A0A1J1IN29   A0A182J4E0  

Pubmed

19121390    26354079    22118469    26227816    17510324    17994087    + More
25315136    24495485    26108605    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    24438588    17550304    25348373    25830018    12364791    20966253   

EMBL

NWSH01000327    PCG77411.1    RSAL01000289    RVE42931.1    BABH01013667    ODYU01009237    + More
SOQ53510.1    KQ461154    KPJ08430.1    KQ459599    KPI94434.1    AGBW02010603    OWR48195.1    JTDY01003451    KOB69535.1    AGBW02008899    OWR52232.1    CH477398    EAT41783.1    CH940649    EDW64208.2    CH933807    EDW12748.2    GAMC01019370    JAB87185.1    CCAG010009531    OUUW01000006    SPP82129.1    SPP82128.1    JRES01000842    KNC27792.1    CM002910    KMY91267.1    BT001489    AAN71244.1    AE014134    AAF53954.2    JXJN01010104    AAG22449.3    CH379058    EAL34578.3    ATLV01014997    KE524999    KFB39819.1    AJWK01011557    CM000158    EDW89976.2    CH954179    EDV54480.2    CH902624    EDV33391.2    GAKP01010880    JAC48072.1    GDHF01006896    JAI45418.1    GDHF01029918    JAI22396.1    KA646296    AFP60925.1    APCN01004555    GBXI01004762    JAD09530.1    CH963920    EDW77873.2    AAAB01008839    AXCM01009489    AJVK01010905    AXCN02000863    UFQS01000798    UFQS01000880    UFQT01000798    UFQT01000880    SSX06976.1    SSX27803.1    CVRI01000055    CRL01568.1   

Proteomes

UP000218220    UP000283053    UP000005204    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000008820    UP000095300    UP000008792    UP000009192    UP000095301    UP000092444    UP000268350    UP000092445    UP000037069    UP000078200    UP000000803    UP000092460    UP000092443    UP000192221    UP000001819    UP000030765    UP000092461    UP000002282    UP000008711    UP000007801    UP000091820    UP000075920    UP000069272    UP000075840    UP000075900    UP000075903    UP000007798    UP000075885    UP000075883    UP000092462    UP000075882    UP000075886    UP000075884    UP000183832    UP000075880   

PRIDE

H9J7E0    Q9VIG5    Q9I7L6   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom       

ProteinModelPortal

A0A2A4JZH2   A0A3S2L0R7   H9J7E0   A0A2H1WKA4   A0A194QTV6   A0A194PNW1   + More
A0A212F377   A0A0L7L282   A0A212FER7   Q175L9   A0A1I8Q150   B4LUM2   B4KKZ8   A0A1I8N1B1   W8AFX6   A0A1B0FK99   A0A3B0K7X4   A0A3B0KEU8   A0A1A9ZPV9   A0A0L0C6B5   A0A0J9R4R9   A0A1A9V8Z5   Q7JRK8   Q9VIG5   A0A1B0B8X5   Q9I7L6   A0A1A9Y5R7   A0A1W4UW75   Q29NR6   A0A084VPC5   A0A1B0CGS3   B4P707   B3NKV7   B3MU62   A0A1A9WZU4   A0A034W159   A0A0K8W2K2   A0A182VV13   A0A0K8U756   T1PC00   A0A182FSL7   A0A182IE20   A0A182RGG8   A0A182VK57   A0A0A1XF02   B4MZT8   A0A182P948   A0A1S4H1C3   A0A182MPR0   A0A1B0D383   A0A182L5Q2   A0A182QSR2   A0A182NEC7   A0A336MG81   A0A1J1IN29   A0A182J4E0  

KEGG

105842449    no KO assigned | (RefSeq) uncharacterized LOC105842449

GO

GO:0016021   GO:0015174   GO:0006865  

Length:

673

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

236.58858

Exp number, first 60 AAs:

24.70822

Total prob of N-in:

0.44613

POSSIBLE N-term signal

sequence

outside

1  -  37

TMhelix

38  -  60

inside

61  -  94

TMhelix

95  -  117

outside

118  -  146

TMhelix

147  -  164

inside

165  -  168

TMhelix

169  -  191

outside

192  -  200

TMhelix

201  -  223

inside

224  -  234

TMhelix

235  -  257

outside

258  -  287

TMhelix

288  -  310

inside

311  -  329

TMhelix

330  -  352

outside

353  -  673

 

 

Pi

177.413471

Theta

164.561536

Tajima's D

-0.81133

CLR

351.04106

CSRT

0.174991250437478

Interpretation

Uncertain