SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04462
Pre Gene Modal
BGIBMGA005375
Annotation
PREDICTED:_sodium_channel_protein_Nach-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.264
 

Sequence

CDS
ATGGAAAACGCGAGGACTTGTGACCTGCGGGATATTCCTTGTCTTCAGATTTACTATGCACAGTCTATCGCAGTTAGACCAGACGTAGAACCGATCTCGGAAGCTTTAGAATTGGATTTGGTTGGTGGAGGCATACCCTGCCCTATGTGCCTACCAACTTGCTCGAAGACCGCTTATAGTTACGATTTTAACAACATTATCATTTATCCTGAATATCTCAACACAGTTCCAGACAACGATAGAGAAAATTGGTTGTAA
Protein
MENARTCDLRDIPCLQIYYAQSIAVRPDVEPISEALELDLVGGGIPCPMCLPTCSKTAYSYDFNNIIIYPEYLNTVPDNDRENWL

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
Pfam
PF00858   ASC
Interpro
IPR001873   ENaC       

Ontologies

Topology

Length:
85
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00353
Exp number, first 60 AAs:
0.00186
Total prob of N-in:
0.61787
inside
1  -  85
 
 

Population Genetic Test Statistics

Pi
29.982586
Theta
34.506
Tajima's D
-0.40552
CLR
133.612098
CSRT
0.263236838158092
Interpretation
Uncertain
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