Gene

KWMTBOMO04459

Pre Gene Modal

BGIBMGA005376

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr8(-):7030076-7033594      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.392 PlasmaMembrane   Reliability : 1.78

CDS

ATGACTAAGATCTTTTGGTTGGTATTCGTAGCACTCTCATGGTATGCTTCGTCATTACTGATAGCGGCTCAGTATGACGCGTATCTAAACAATCCTATTTCATTTGTGGTGGAAACAACTTACAAAGATTGGAATACATATTTTCCTGCCGTCGCTGTATGCGAAAACGACAATTCAAAACGTGCTGAAGAAATATCTGACAGTTTGTGGGGTCAAGAACATGATTTTAACATAGAGGAAGTTCTAAAGGAATGGGCATTTTTCAAAGGCGTCACATACTACACCTCGGAATTTTGTAATGTAGAAAATGGAGAAGTTTTACCGGAGTGCGTCGAATCTAATCTAACTTATTATGCCAATTTGGTAAGAAGTACCTGTAAAGAAAGTTTATCAGATTGTTCTTGGAACGGCGAAGCTTTTGAGTGTTGTGATTATTTCCGACCTTTGGATACTGAACTAGGCACGTGTTACGCCATCAACTCTATTCAAGGAAGAGAATCGAATCCGCCATTTCTACGAATGGTAAGCAACAGGACTACGGGTCCTGGAGTGCTGAGGTTCAATGTCCTAATACCCGCTAATGTTTACGTTCTAAACGAAGAAGACGTACCAGCTCTAACAACAATTGGATCAGATGTATTGACTGTACTGAAAGCACCATGGTCATCGAGGCCTGGTCTGTATTGCAACTGTTTACCGTCTTGTACAGAATCAGAGATTTCCGTCATTAATGATTTAAAAGACGCCACTGCCGAAGACTATGCCACTGTAGAAATAGAACTAGCGATGTTGCCATCCGAGCGGTACAGGAGGAATGTCGTAAGAGGAATACTTGACCTAGTCGGTTAG

Protein

MTKIFWLVFVALSWYASSLLIAAQYDAYLNNPISFVVETTYKDWNTYFPAVAVCENDNSKRAEEISDSLWGQEHDFNIEEVLKEWAFFKGVTYYTSEFCNVENGEVLPECVESNLTYYANLVRSTCKESLSDCSWNGEAFECCDYFRPLDTELGTCYAINSIQGRESNPPFLRMVSNRTTGPGVLRFNVLIPANVYVLNEEDVPALTTIGSDVLTVLKAPWSSRPGLYCNCLPSCTESEISVINDLKDATAEDYATVEIELAMLPSERYRRNVVRGILDLVG

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

H9J784   A0A0L7L3I4   A0A194PNV6   A0A2H1WKA5   A0A194QTW1   B4MR50   + More
B4GJH6   A0A3B0JMP3   B4P703   B3NKV3   B5DHT1   B4IFJ9   B4Q3Y0   Q86LG9   A0A1W4UV41   Q175M1   A0A182PJ85   A0A2M4CME2   A0A0M5J9K0   A0A0M5J227   A0A182YGS8   B3MU58   B4LUL8   W5JKJ9   A0A084VP06   A0A182KFM7   A0A1S4FE88   A0A182MU54   Q7Q3M0   A0A182WT66   B4JE99   A0A336MNG8   A0A336LWX4   A0A1I8N060   A0A1I8PKI8   A0A0L0C6A3   B0XIF0   U5ETC3   B4KKZ4   A0A182W9P5   A0A182RVK1   A0A194QXX8   D6WYQ4   A0A194PM81   A0A1W4WD96   A0A182NEB6   A0A1J1IPA5   A0A2A4K160   A0A2H1VYY4   A0A240SY07   A0A1B6DLH8   T1H8J9   J9K6V5   A0A1B6C2N5   A0A2J7RCQ7   A0A067RB98   A0A067QTA5   J9JYN8   A0A2J7PHM1   A0A182QV99   Q16L20   A0A1J1HFQ2   B4K758   A0A182GLK8   A0A1W4U653   A0A182GEY7   B0X7T4   A0A182UG85   A0A139WEM9   A0A084WH78   A0A1I8NTF7   Q176V2   A0A0L0BN58  

Pubmed

19121390    26227816    26354079    17994087    17550304    15632085    + More
22936249    10731132    12537568    12537572    12537573    12537574    12571352    16110336    17569856    17569867    26109357    26109356    17510324    25244985    20920257    23761445    24438588    12364791    14747013    17210077    25315136    26108605    18362917    19820115    24845553    26483478   

EMBL

BABH01013660    JTDY01003170    KOB70022.1    KQ459599    KPI94429.1    ODYU01009237    + More
SOQ53511.1    KQ461154    KPJ08435.1    CH963849    EDW74589.1    CH479184    EDW36792.1    OUUW01000006    SPP82133.1    CM000158    EDW89972.1    CH954179    EDV54476.1    CH379058    EDY69858.2    CH480833    EDW46421.1    CM000361    CM002910    EDX05696.1    KMY91271.1    AY226544    AE014134    AAO47370.1    AAX52675.1    CH477398    EAT41781.1    GGFL01002332    MBW66510.1    CP012523    ALC40356.1    ALC40344.1    CH902624    EDV33387.1    CH940649    EDW64204.1    ADMH02001256    ETN63400.1    ATLV01014965    KE524999    KFB39700.1    AXCM01001403    AAAB01008964    EAA12771.3    CH916368    EDW03619.1    UFQT01001837    SSX31962.1    UFQT01000264    SSX22556.1    JRES01000842    KNC27782.1    DS233296    EDS29204.1    GANO01002845    JAB57026.1    CH933807    EDW12744.1    KPJ08431.1    KQ971357    EFA08448.1    KPI94432.1    CVRI01000055    CRL01562.1    NWSH01000327    PCG77410.1    ODYU01005000    SOQ45444.1    AJWK01011557    GEDC01010828    JAS26470.1    ACPB03009340    ABLF02031349    ABLF02031358    GEDC01029779    JAS07519.1    NEVH01005884    PNF38621.1    KK852575    KDR21023.1    KK853042    KDR12140.1    ABLF02020828    NEVH01025135    PNF15837.1    AXCN02002523    CH477926    EAT35009.1    CVRI01000002    CRK86824.1    CH933806    EDW16371.1    JXUM01073172    KQ562760    KXJ75174.1    JXUM01058874    KQ562023    KXJ76884.1    DS232462    EDS42153.1    KQ971354    KYB26420.1    ATLV01023795    KE525346    KFB49572.1    CH477382    EAT42184.1    JRES01001623    KNC21456.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007798    UP000008744    + More
UP000268350    UP000002282    UP000008711    UP000001819    UP000001292    UP000000304    UP000000803    UP000192221    UP000008820    UP000075885    UP000092553    UP000076408    UP000007801    UP000008792    UP000000673    UP000030765    UP000075881    UP000075883    UP000007062    UP000076407    UP000001070    UP000095301    UP000095300    UP000037069    UP000002320    UP000009192    UP000075920    UP000075900    UP000007266    UP000192223    UP000075884    UP000183832    UP000218220    UP000092461    UP000015103    UP000007819    UP000235965    UP000027135    UP000075886    UP000069940    UP000249989    UP000075902   

PRIDE

H9J784    Q86LG9   

Pfam

PF00858   ASC        + More
PF02958   EcKinase
PF00096   zf-C2H2
PF07776   zf-AD
PF04218   CENP-B_N

Interpro

IPR001873   ENaC        + More
IPR015897   CHK_kinase-like       
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR013087   Znf_C2H2_type       
IPR036322   WD40_repeat_dom_sf       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR001680   WD40_repeat       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR017896   4Fe4S_Fe-S-bd       

SUPFAM

SSF56112   SSF56112        + More
SSF57667   SSF57667       
SSF50978   SSF50978       
SSF50998   SSF50998       
SSF46689   SSF46689       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J784   A0A0L7L3I4   A0A194PNV6   A0A2H1WKA5   A0A194QTW1   B4MR50   + More
B4GJH6   A0A3B0JMP3   B4P703   B3NKV3   B5DHT1   B4IFJ9   B4Q3Y0   Q86LG9   A0A1W4UV41   Q175M1   A0A182PJ85   A0A2M4CME2   A0A0M5J9K0   A0A0M5J227   A0A182YGS8   B3MU58   B4LUL8   W5JKJ9   A0A084VP06   A0A182KFM7   A0A1S4FE88   A0A182MU54   Q7Q3M0   A0A182WT66   B4JE99   A0A336MNG8   A0A336LWX4   A0A1I8N060   A0A1I8PKI8   A0A0L0C6A3   B0XIF0   U5ETC3   B4KKZ4   A0A182W9P5   A0A182RVK1   A0A194QXX8   D6WYQ4   A0A194PM81   A0A1W4WD96   A0A182NEB6   A0A1J1IPA5   A0A2A4K160   A0A2H1VYY4   A0A240SY07   A0A1B6DLH8   T1H8J9   J9K6V5   A0A1B6C2N5   A0A2J7RCQ7   A0A067RB98   A0A067QTA5   J9JYN8   A0A2J7PHM1   A0A182QV99   Q16L20   A0A1J1HFQ2   B4K758   A0A182GLK8   A0A1W4U653   A0A182GEY7   B0X7T4   A0A182UG85   A0A139WEM9   A0A084WH78   A0A1I8NTF7   Q176V2   A0A0L0BN58  

KEGG

101743332    K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021   GO:0005272   GO:0006814   GO:0005634   GO:0008270   GO:0003676   GO:0003677   GO:0016020   GO:0006281   GO:0004812   GO:0006418   GO:0009058   GO:0016742   GO:0003824  

PANTHER

PTHR11690  

SignalP

Position:   1 - 23,         Likelihood:  0.953824

 

 

Length:

282

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.72914

Exp number, first 60 AAs:

19.7189

Total prob of N-in:

0.84208

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  282

 

 

Pi

266.173863

Theta

185.469488

Tajima's D

1.089565

CLR

0.38893

CSRT

0.685815709214539

Interpretation

Uncertain