SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04458  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005426
Annotation
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
Location
Bomo_Chr8(+):7011875-7027957      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.702
 

Sequence

CDS
ATGACATCTATGGAAGAGAGTGAAACTCCTGAAGAGGTGATACCTGGAAATCCAGATGAACTTGCCAAAAATCCTACTGCACTTAAAGATGCTCATGAACAAATGGCAGCACTAGATATTCTGGTCTGTGGGCAGTGTCACTCTGCATTCCATTTTGTAGAAGAGTTTAAAGAACATAAAGAAGGTACCAATTGTTCAGGAAAGTCCCCAGTAAGGGATAGTAATGAAAGTAAGGCACAGGTGTGGGCATTCCTGTTATGGAAATGTTCTTCTGCTCGAGAAGGCTCCGCTGTTAGCACAGACAACAGCTGGAAGCTGTATCAGCAGTGGTGCCGGATGCCAGAAGCACAACGTAATGCCTGGATCACAGCTGGACAGAATGTACAGTCACTATCTAAATATGCACATGCTAAAGTCATGGAGTTGAAAGTAGAGGACCAACAGGTACCTGTAACACCTGGCCATGAAATAAAGAAACGAGGTAGACCAAAAAAAATACTCAAGCAGGATGACCTGGAAGCTGTACCATCCGGAGAAGAAAGTGAAGAAACCAAAAGTCATTTAACACCGAAGATTACTCACAAAACGCCTCTGGCAACAAATATAAAGTCAAAGGATCTAAACGACTCCGTGCGTAACGCCCAAGAGCGTGTGCCTCCCGAGGAGCGCATCGCGCGGCGCACGGAGCGGCAGGGCGACCCAGCCGAGGCGGGAGAGTACGTTGTCGAGAAAATACTCGCCAAACGGTTCAACCCTCGTCGCAAGCAATATGAATACCTGCTCAAGTGGGAGGGATATCCTCATGACCAAAATACATGGGAGCCGGTAGAGAATATGGAGACCTGTAAACATTTGCTAGAAGCATTTGAGAAGCAGTTAGCTCGTCAAAAAGAGCTCAAGGCATTACGTGCACAACAACAACAGCATCCCGTACAAGTGAAACAGACAAACACACCTTTGCCACAGGTTGTGAAGCAGGTTATAAAGAAAACAGAGAGTCCAGTCACACCTTCAGGGCGCTTACAACGTACGAGCAAAGTTCGTGCACTAGATCAAGTGAAGGCGTGGTGCGGTGTAGAGGATGGCGAACCGATGTCCAAGAAAGTCAAGAGGGAGATGTCCAGTGAAGACGAAGACTTCTCGGATCTTGAATCAAAACATGAGAAGAAGATAGTGAATGGACAATCTTCACCAAAGTCAACGTTAGACCCTGAGCTGGTAAAATCGCTCGGTCTGGGCGGGAAGGGTATGCCGAACATAAAGGGGGTTATTAAAGTTGACCCTAAACATATGCCTAATCTTTCTACAGGAGTGTACATAATGTCCAAAAGCTCAGGGATAATGAAGATTGATTCTCCAGGGAAATTAGGACCGGGTCTTAATATTGACCAGGATGCTATTAGAAAACAGATAATGGCTGCAAAACAGAAAGTGGAGGAAACCAAAAAAATTTCATCATCACCCCGTCCACCAATACCGTCACAGATAAAGAAAACATTTACCTCGGGAGGTCAGCAAGTTACAGAAAAAACAATAATAACACCATCAGGACAAAAGATCATTCAGCGCACAATACAGCGACCAGCTGGAATTAGTTCTGATAAGTCACCTGTAACTATCCTCAATAAGAAACTTGCTCAAGGGGATAGCTTGCTACGTCGTGGTGGAAGCAGTCGGGGGCGGGGCCGCGGTGGTTACTCTATATCCACAGCAGGTGGAAATATCGTTCGTATCAGAGACAAAGCACCTGTACCAGTATCATTTGATTTTGAACAGTCAGATGCGTCGTCGGACACATCGGACGGCATCGAGGACCCGTTCCCGCGCGACCTCGGGCCGCTGCCCCCGGACAGTCCGCCGCGGGAGCTGACGCTGTGTCCGCTGACCGGGCGCCGCCTCGCGCGCGCCGAGGGCGAGCCCACGCCGCCGCCCACTCCGCCCCCTGCGCCCCTCACTCCGCCGCCCACATCCGCGCCCGCCACGCTACTCATGAAGGTTGAAATGTCCCCTGGAGGAACTACGGGGATGCTCGTACAAGGTGAGGGCGCTCAACCGTCTCTGCCAGTACTCACAGACGACGACGGCACTGAAGTGAAAGTAGAAGCTAGTGCAGTGAAACAACTTTTAGAAGAAGGTGTTGGTGTCGATGAAAGTGAAGAAGTTGGGTTATTAGACGCGGGACACGCGCCTATCATGATTCGGGGAGAGGATGGTGTGCTGTACCAGGTGGCTGGTGAAAACGAGGCTGGGCAAACGTTATTGGTGGCTGCGGAAGGCGTCGAGGGTGCAGTGGAGGGAGCCGTCGAGGGTGAAGGTGACGTCATGTACGTTACTAGAGAAGATGGACAGGATGTACTGGCGATCGACGGGTCCGGCCTGGCGCAGCTGGTGCCGAGCGACGGTCCGCTGCAGCAGGTCGCGGTGCAGGTCGAGGGCGAGCCCGGCGAGGACGCCACGCAAGTCGTCGCGCAGCTGCTGCAGACTGACCTACCCAGTCCCGGTGGAACGCGGCGAGTCGTCTTATTGTTGCCCGACGGTACGCTCACAGTTACAGAGCTCGACAAGGAACAGTACGAATCTATTACAGAAGCAGGCAAAGCACAAGAATAA
Protein
MTSMEESETPEEVIPGNPDELAKNPTALKDAHEQMAALDILVCGQCHSAFHFVEEFKEHKEGTNCSGKSPVRDSNESKAQVWAFLLWKCSSAREGSAVSTDNSWKLYQQWCRMPEAQRNAWITAGQNVQSLSKYAHAKVMELKVEDQQVPVTPGHEIKKRGRPKKILKQDDLEAVPSGEESEETKSHLTPKITHKTPLATNIKSKDLNDSVRNAQERVPPEERIARRTERQGDPAEAGEYVVEKILAKRFNPRRKQYEYLLKWEGYPHDQNTWEPVENMETCKHLLEAFEKQLARQKELKALRAQQQQHPVQVKQTNTPLPQVVKQVIKKTESPVTPSGRLQRTSKVRALDQVKAWCGVEDGEPMSKKVKREMSSEDEDFSDLESKHEKKIVNGQSSPKSTLDPELVKSLGLGGKGMPNIKGVIKVDPKHMPNLSTGVYIMSKSSGIMKIDSPGKLGPGLNIDQDAIRKQIMAAKQKVEETKKISSSPRPPIPSQIKKTFTSGGQQVTEKTIITPSGQKIIQRTIQRPAGISSDKSPVTILNKKLAQGDSLLRRGGSSRGRGRGGYSISTAGGNIVRIRDKAPVPVSFDFEQSDASSDTSDGIEDPFPRDLGPLPPDSPPRELTLCPLTGRRLARAEGEPTPPPTPPPAPLTPPPTSAPATLLMKVEMSPGGTTGMLVQGEGAQPSLPVLTDDDGTEVKVEASAVKQLLEEGVGVDESEEVGLLDAGHAPIMIRGEDGVLYQVAGENEAGQTLLVAAEGVEGAVEGAVEGEGDVMYVTREDGQDVLAIDGSGLAQLVPSDGPLQQVAVQVEGEPGEDATQVVAQLLQTDLPSPGGTRRVVLLLPDGTLTVTELDKEQYESITEAGKAQE

Summary

Uniprot
A0A2H1VRT1   A0A194RBL0   A0A194PTL0   A0A212EI92   A0A1W4WJV5   A0A1W4W8B7   + More
A0A1W4W8A9   A0A1W4W8B4   A0A1W4WIM1   D6WZC7  
Pubmed
26354079    22118469    18362917    19820115   
EMBL
ODYU01003876    SOQ43182.1    KQ460397    KPJ15218.1    KQ459599    KPI94475.1    + More
AGBW02014681    OWR41195.1    KQ971372    EFA10406.1   
Proteomes
UP000053240    UP000053268    UP000007151    UP000192223    UP000007266   
Pfam
PF00385   Chromo
Interpro
IPR000953   Chromo/chromo_shadow_dom        + More
IPR016197   Chromo-like_dom_sf       
IPR023780   Chromo_domain       
IPR023779   Chromodomain_CS       
SUPFAM
SSF54160   SSF54160       
CDD
cd00024  CHROMO
ProteinModelPortal
A0A2H1VRT1   A0A194RBL0   A0A194PTL0   A0A212EI92   A0A1W4WJV5   A0A1W4W8B7   + More
A0A1W4W8A9   A0A1W4W8B4   A0A1W4WIM1   D6WZC7  
PDB
4QUF     E-value=8.05595e-10,     Score=156

Ontologies

KEGG
101744580    no KO assigned | (RefSeq) uncharacterized LOC101744580
GO
GO:0005634  

Topology

Subcellular location
Nucleus  
Length:
869
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00003
outside
1  -  869
 
 

Population Genetic Test Statistics

Pi
229.510127
Theta
186.751849
Tajima's D
0.747845
CLR
0.387935
CSRT
0.579821008949553
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 NAWITAGQNVQSISK 100.00 2e-10
26280517 WDTCSQICVPK 100.00 2e-10
26822097 IYQQWCR 100.00 0.002
26280517 VECINIPGSFR 100.00 0.002
28556443 QAQNTQLIPK 100.00 0.002
26822097 HIIEAFEK 100.00 0.013
26280517 QDQDEYAVNSYK 100.00 0.013
28556443 TFTSGGQQVTEK 100.00 0.037
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号