Gene

KWMTBOMO04457  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005425

Annotation

ubiquitin-conjugating_enzyme_E2_[Bombyx_mori]

Location

Bomo_Chr8(+):7004715-7006160      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.008 Nuclear   Reliability : 1.482

CDS

ATGTCAGGGATAGCAAGTGCACGTTTAGCTGAAGAACGGAAAGCTTGGCGTAAGGACCATCCCTTTGGTTTTGTCGCGAGGCCTATGAAGAATCCAGATGGTTCATTGAATTTAATGACTTGGGAATGTGCGATACCTGGTAAAAAGGGGACTCCATGGGAAGGTGGGCTGTATAAACTACGTATGATCTTCAAAGATGATTATCCATCAAGTCCTCCAAAATGCAAATTTGAACCACCACTGTTCCACCCCAATGTGTATCCATCAGGTACGGTGTGCTTGTCACTGCTTGATGAAGAAAAAGATTGGCGTCCAGCAATCACAATAAAGCAAATTTTGTTGGGTATTCAAGATCTTCTCAATGAGCCTAACGTAAAAGATCCAGCGCAAGCTGAAGCCTACACAATTTATTGTCAAAATCGGCTAGAGTATGACAAGCGAGTAAGAGCGCAGGCACGTGCAATGGCTGCTGCTGAGTAA

Protein

MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAMAAAE

Similarity

Belongs to the ubiquitin-conjugating enzyme family.

Uniprot

Q1HQ12   A0A1E1WIV3   A0A2H1VQQ8   S4NX65   A0A212EI91   I4DMK3   + More
A0A194RCM2   A0A194PM11   H9J7D3   A0A232F9D5   A0A195D401   A0A195EF23   E9IYI6   A0A195BR90   A0A195EST1   E2C4E1   A0A158NTL6   A0A151X3J8   A0A026W1W6   K7J1T7   A0A336MKU1   A0A1Q3G1Y2   Q1HR94   A0A023EHD1   T1KLC2   A0A2A3ELW9   V9ICK7   A0A088A1R5   A0A0K8TPC1   A0A1Y1MF11   A0A1W4WGU3   A0A310SLB8   A0A182WQP6   A0A1Y1MB48   A0A154P2W4   A0A182QZ21   A0A1A9YDU8   A0A1A9V8J9   A0A1B0C0Z9   A0A1I8Q7H7   A0A1L8EHQ8   A0A1A9WUM5   T1PFP1   D3TM74   A0A1B0A0H6   A0A0D6E144   A0A0L7R5F3   U5ELC3   A0A2M3Z6K9   A0A2M4C1Y1   A0A182MGK7   A0A182F9W6   E0VKW9   A0A084W693   A0A0J7L691   A0A2Z5U5Z8   E2AVC1   A0A182QS12   T1E916   A0A1B6KVV2   A0A087UNL8   A0A1J1IZP3   W8AAM0   A0A034WIN5   A0A0A1WUB7   A0A0K8W230   B3N7R4   A0A1W4UQT5   B4LTM6   B4P2F4   A0A0M5J188   B3MUG4   A0A0L0CD73   B4ICY1   B4Q651   B4KFH6   Q7KNM2   D4N5G6   B6V7F3   A0A0P4WM61   A0A182USN1   A0A182JS28   A0A182UJN4   A0A182WUE3   A0A182KKS0   Q7QH85   A0A182HW32   A0A2M4AJM0   A0A0T6AVH4   B4JDQ6   A0A0P6IFU2   A0A182IMQ7   V9Z8T4   K4K334   A0A1B6F118   A0A182P5B6   A0A2P2HZC6   A0A2M4CUH2   A0A182MR47   A0A182RD75  

Pubmed

23622113    22118469    22651552    26354079    19121390    28648823    + More
21282665    20798317    21347285    24508170    20075255    17204158    17510324    24945155    26483478    26369729    28004739    25315136    20353571    20566863    24438588    26760975    24495485    25348373    25830018    17994087    17550304    26108605    22936249    18057021    9514881    9822580    9990118    10660560    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    19944179    20966253    12364791    14747013    17210077   

EMBL

DQ443240    ABF51329.1    GDQN01004130    JAT86924.1    ODYU01003876    SOQ43183.1    + More
GAIX01014295    JAA78265.1    AGBW02014681    OWR41194.1    AK402521    BAM19143.1    KQ460397    KPJ15219.1    KQ459599    KPI94476.1    BABH01013657    NNAY01000698    OXU26927.1    KQ976881    KYN07630.1    KQ978983    KYN26761.1    GL767018    EFZ14367.1    KQ976424    KYM88658.1    KQ981993    KYN30972.1    GL452462    EFN77178.1    ADTU01026019    KQ982562    KYQ54859.1    KK107549    EZA49049.1    UFQT01001348    SSX30141.1    GFDL01001242    JAV33803.1    DQ440200    CH477613    ABF18233.1    EAT38311.1    EAT38312.1    JXUM01024247    JXUM01082055    JXUM01082056    GAPW01005303    KQ563287    KQ560684    JAC08295.1    KXJ74120.1    KXJ81285.1    CAEY01000211    KZ288215    PBC32745.1    JR038749    AEY58392.1    GDAI01001404    JAI16199.1    GEZM01036166    JAV82925.1    KQ764881    OAD54339.1    GEZM01036167    JAV82924.1    KQ434792    KZC05470.1    AXCN02002166    JXJN01023842    GFDG01000529    JAV18270.1    KA647632    AFP62261.1    CCAG010016193    EZ422526    EZ422527    ADD18802.1    LN809889    CEO43914.1    KQ414652    KOC66115.1    GANO01001466    JAB58405.1    GGFM01003327    MBW24078.1    GGFJ01010176    MBW59317.1    AXCM01003849    DS235255    EEB14025.1    ATLV01020762    KE525307    KFB45737.1    LBMM01000589    KMQ98014.1    FX985741    BBA93628.1    GL443064    EFN62617.1    AXCN02000942    GAMD01002253    JAA99337.1    GEBQ01024375    JAT15602.1    KK120751    KFM78957.1    CVRI01000061    CRL04049.1    GAMC01021650    JAB84905.1    GAKP01004947    JAC54005.1    GBXI01011638    JAD02654.1    GDHF01014024    GDHF01007170    JAI38290.1    JAI45144.1    CH954177    EDV57240.1    CH940649    EDW64999.1    CM000157    EDW87150.1    CP012523    ALC38531.1    CH902624    EDV33493.1    JRES01000561    KNC30210.1    CH480829    EDW45407.1    CM000361    CM002910    EDX03235.1    KMY87327.1    CH933807    EDW13091.1    KRG03575.1    AF030443    AF030444    AF106664    AF218861    AE014134    AY060944    AY113433    KX531808    AB017606    AB017607    AAC38964.1    AAC38965.1    AAD21970.1    AAF31701.1    AAF51487.1    AAL28492.1    AAM29438.1    AAN10499.1    AGB92370.1    AGB92371.1    ANY27618.1    BAA34574.1    BAA34575.1    GQ923775    ADD73553.1    FJ265877    ACJ03792.1    GDRN01027647    GDRN01027646    JAI67638.1    AAAB01008816    EAA05219.1    APCN01001462    GGFK01007664    MBW40985.1    LJIG01022713    KRT79097.1    CH916368    EDW03426.1    GDIQ01011816    JAN82921.1    KF773850    AHE40943.1    JX481275    QCYY01001497    AFU93453.1    ROT77656.1    GECZ01026206    JAS43563.1    IACF01001427    LAB67128.1    GGFL01004727    MBW68905.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000005204    UP000215335    UP000078542    + More
UP000078492    UP000078540    UP000078541    UP000008237    UP000005205    UP000075809    UP000053097    UP000002358    UP000008820    UP000069940    UP000249989    UP000015104    UP000242457    UP000005203    UP000192223    UP000075920    UP000076502    UP000075886    UP000092443    UP000078200    UP000092460    UP000095300    UP000091820    UP000095301    UP000092444    UP000092445    UP000053825    UP000075883    UP000069272    UP000009046    UP000030765    UP000036403    UP000000311    UP000054359    UP000183832    UP000008711    UP000192221    UP000008792    UP000002282    UP000092553    UP000007801    UP000037069    UP000001292    UP000000304    UP000009192    UP000000803    UP000075903    UP000075881    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000001070    UP000075880    UP000283509    UP000075885    UP000075900   

PRIDE

Q1HQ12    H9J7D3    Q7KNM2   

Pfam

PF00179   UQ_con

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR023313   UBQ-conjugating_AS       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

Q1HQ12   A0A1E1WIV3   A0A2H1VQQ8   S4NX65   A0A212EI91   I4DMK3   + More
A0A194RCM2   A0A194PM11   H9J7D3   A0A232F9D5   A0A195D401   A0A195EF23   E9IYI6   A0A195BR90   A0A195EST1   E2C4E1   A0A158NTL6   A0A151X3J8   A0A026W1W6   K7J1T7   A0A336MKU1   A0A1Q3G1Y2   Q1HR94   A0A023EHD1   T1KLC2   A0A2A3ELW9   V9ICK7   A0A088A1R5   A0A0K8TPC1   A0A1Y1MF11   A0A1W4WGU3   A0A310SLB8   A0A182WQP6   A0A1Y1MB48   A0A154P2W4   A0A182QZ21   A0A1A9YDU8   A0A1A9V8J9   A0A1B0C0Z9   A0A1I8Q7H7   A0A1L8EHQ8   A0A1A9WUM5   T1PFP1   D3TM74   A0A1B0A0H6   A0A0D6E144   A0A0L7R5F3   U5ELC3   A0A2M3Z6K9   A0A2M4C1Y1   A0A182MGK7   A0A182F9W6   E0VKW9   A0A084W693   A0A0J7L691   A0A2Z5U5Z8   E2AVC1   A0A182QS12   T1E916   A0A1B6KVV2   A0A087UNL8   A0A1J1IZP3   W8AAM0   A0A034WIN5   A0A0A1WUB7   A0A0K8W230   B3N7R4   A0A1W4UQT5   B4LTM6   B4P2F4   A0A0M5J188   B3MUG4   A0A0L0CD73   B4ICY1   B4Q651   B4KFH6   Q7KNM2   D4N5G6   B6V7F3   A0A0P4WM61   A0A182USN1   A0A182JS28   A0A182UJN4   A0A182WUE3   A0A182KKS0   Q7QH85   A0A182HW32   A0A2M4AJM0   A0A0T6AVH4   B4JDQ6   A0A0P6IFU2   A0A182IMQ7   V9Z8T4   K4K334   A0A1B6F118   A0A182P5B6   A0A2P2HZC6   A0A2M4CUH2   A0A182MR47   A0A182RD75  

PDB

5FQ2     E-value=2.28651e-73,     Score=695

KEGG

732943    K10577 ubiquitin-conjugating enzyme E2 I | (RefSeq) ubiquitin-conjugating enzyme E2

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)
04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0019789   GO:0016874   GO:0016021   GO:0002225   GO:0031072   GO:0000940   GO:0042802   GO:0071560   GO:0007391   GO:0016321   GO:0030721   GO:0035204   GO:0035207   GO:0000780   GO:0061656   GO:0008354   GO:0033134   GO:0045751   GO:0051091   GO:0007143   GO:0005634   GO:0006464   GO:0045611   GO:0016925  

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10105

outside

1  -  159

 

 

Pi

166.695142

Theta

172.805648

Tajima's D

-0.270084

CLR

0.793489

CSRT

0.299735013249338

Interpretation

Uncertain