SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04451
Pre Gene Modal
BGIBMGA005421
Annotation
PREDICTED:_orcokinin_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.094 Nuclear   Reliability : 1.154
 

Sequence

CDS
ATGCGAGGAACTGCTGGAGTGCTTGCCGTGGCAGTGGCTGCACTGCTGGTCTGTTGCAGCGCTGATCCTCACCAGGAACAAGACGTGTCTGGCAACGATCATACCTCTGGGGAACGCTACGATGCCGCCGAGTATAAACAAAAAGAAGATATTGCCGACATTTTACGATTTCTTGTACGTTATGAAAATCGTAATCTAAACGGAATTGGAGGAAGTTCGCTTATTGGAAGAAATGCGAATGGAATTGAGGGAGGCGCATTTTCGAGCAAGCATTTGGGCGGGCTTGGAGGATCCACTCTTATCGGTAGAAATTTGAACCATTTAAGAGGATCTAGCATGTTACAGAGTGGAAACGTTCATGGTCTTGGCGGATCAAGTCTCATTGGAAAAAATCTTAACGGTATTGGAGGATCTACATTATTGGGAAGAAACGCTGAAGGGGATAAAACAGAATCTACAAGATTTCTCGATCCTCTTGGAGGTAGCAACTTTGTGCGTAACTTAGACTCCCTTGGAGGAGCTAATTTTGTCAGAAACTTAGACTCTCTTGGAGGAGCTAATTTTGTCAGAAACTTAGATTCGCTCGGTGGAGCTAATTTTGTCAGAAACTTAGACTCGCTTGGTGGTGCCAATTTTGTAAGGAACTTGGACTCGCTCGGTGGCGCGAACTTCGTAAGAAATTTGGATTCCTTGGGCGGGGCCAACTTTGTGAGAAACTTAGATTCACTCGGAGGAGCGAATTTCGTGAAGAGGAATCTTGACCAGCTAGGTGGTCCTAACCTCGTCAAGCGTAATCTTGATTCTTTGGGAGGTGGTCACAAAACAAGGAATCTGGATCCTCTAGGTGGCGGTAATCTGGTGCGAGACGTGAGGGAAGCAAGACACTCCGGATATCTACCGTATCAAATGTTCAGGCGGTACGATTACATCAGTCCATATGGCAAACGAGAACCCTGGCCTCTGGTGCCAGCTGAATATGGCGGATATTATGGAGATGGCTTCCCAAAACGTAATTTCGATGAAATCGATCGGTCCAGCCTCAACACGTTCGTGAAGAAGCGCAACTTCGACGAGATCGACCGCTCCTCTATGCCGTTCCCGTACGCCATAAAACGTTTCTATCACCTGTCAAGTTTCGATAAGAAAAGATACAGACCAGACTACCCCATGGATGAGATTGATCTGTCTCACTTTCCCGTCGGATCCAAAAGATCTCAAGACTCTTACCCGCTCGCCTCTAACCTTTAA
Protein
MRGTAGVLAVAVAALLVCCSADPHQEQDVSGNDHTSGERYDAAEYKQKEDIADILRFLVRYENRNLNGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIGKNLNGIGGSTLLGRNAEGDKTESTRFLDPLGGSNFVRNLDSLGGANFVRNLDSLGGANFVRNLDSLGGANFVRNLDSLGGANFVRNLDSLGGANFVRNLDSLGGANFVRNLDSLGGANFVKRNLDQLGGPNLVKRNLDSLGGGHKTRNLDPLGGGNLVRDVREARHSGYLPYQMFRRYDYISPYGKREPWPLVPAEYGGYYGDGFPKRNFDEIDRSSLNTFVKKRNFDEIDRSSMPFPYAIKRFYHLSSFDKKRYRPDYPMDEIDLSHFPVGSKRSQDSYPLASNL

Summary

Interpro
IPR009939   Chitosanase_fungal        + More
IPR016024   ARM-type_fold       
IPR040384   FCAP       
SUPFAM
SSF48371   SSF48371       
PDB
5CUR     E-value=0.0105158,     Score=91

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.998820
 
 
Length:
415
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.324489999999999
Exp number, first 60 AAs:
0.32216
Total prob of N-in:
0.02061
outside
1  -  415
 
 

Population Genetic Test Statistics

Pi
199.617724
Theta
19.694782
Tajima's D
0.060369
CLR
0.225993
CSRT
0.392080395980201
Interpretation
Uncertain
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