Gene

KWMTBOMO04436  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005412

Annotation

PREDICTED:_ESF1_homolog_[Papilio_xuthus]

Location

Bomo_Chr8(+):6685653-6691550      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.092

CDS

ATGAGTAATATTTTGCAAGATAGTCGATTCACCAAATATTTGAGTGATCCACGATACAGACAAATCCCGAAACATGAAAGAAAGGTAAAAATTGATAAAAGATTTCAGCCCATGTTTGACGATGAAAAGTTCAAAGTTAAATACACAGTAGATAAAAGGGGACGGCCCATTAATGAGACTTCAACTGAGAACTTGAGAAAGTATTACGATTTAGACGAATCGGACGACAGCGAAGATTCCGATGAAGAAAAAGCAGAAGAACCAGGGCGTTTTGTAAAGCGACCGTCTACTGACGATGAGAGTATTGATAAAATTGACCCTAAAACATTAAATGACAAATTAACCCGTGGAAAACTAGATAAAAAAATTAAGACTAGATTATTGGATTTAGATATTGACTATGCTCGCGGTGAAGGTGTTTTGCTTACGGATAGTTCTTCAGAAGCAGAAAGTAGCGATACAGAAGATGATAGTGAAATGGAGCATGAATGGGGAGAGTTGGATGCTGATGCTGAAACTACTGAAGAGTCAACTCGGAGAATCGCCATTTGCAATATGGACTGGGATAACATTAAAGCATCGGATCTGATGGTTTTGCTGAATTCATTTATTCCGCCTGGAGGAATTATTCACAAGATTTCGATTTATCCCTCTGAATTTGGTTTGAAAAGAATGCAAGAAGAAGAAGTACGAGGCCCCATTGAACTGACAACAGAAAAATCTGAAAATCTCCCTGAAGATGGTGGAAATGAAGAGGGATCAACATACCACATGGAAAAACTGCGACGTTACCAGCTGAATAGATTGAAATACTTCTATGCAGTGGTGGAATGTGATACAGTGACTACCGCTGATAAGTTGTATAATGAATGTGACGGGATGGAATACGAAAGTAGTGCAACTCGCCTCGATATGAGGTTCATACCTGATAATGTAACTTTCGATCATGAACCCCGTGAGGTATGCAGTAAGTTGCCCGACCTCCGCAAGTACAAGCCTCGTCTGTTCACAACTACAGCGCTGCAACAAGCTAAGGTCGAGCTTACATGGGACGCCACCAATCCTAACCGCACTGAAATAATTAAAAACGCACTCGACGGGAAAATAGAAGACCTTGACCTCAAAGAATATTTAGCTTCGAGTAGTGATGAAAGCGAAGATGAGAATCAGCCCAAAAAAATTGAAAGCAATATTCAATCAGACGACGACAATGAAGATCCGATACAAAAATACAAATTATTACTTGATGAAATTGATAAAAAAGAGGAAAAGAAGAAAAATAAAGATATGGAAATGGAAATTACGTGGGGATTAGGAATAAAAGAAAAAGCGCAAGAACTGGTCAAAAAGAAACAAGATGAAGGAAACGCGAACCTTACGCCGTTTGAACAATTATTGAAGAAGCGTAAAGAAAAGAAGAGGTTAAAGAAAATGAAAAAGATGAAAGATTCGAAACAAGATGAAGATGATAATTCAGATAATGTGTCTGATGATGTACCGTCTGATATCGACATGAACGACCCGTACTTTGCAGAAGAATTCAATAAACCAGAATTTAAAGGTACAAAAGGTAAATCTAAAGTAAATCCTACAAGCAACGAAAATATTGAACACGACGAAGAAAAGAAAAAAGCCGAACTTGAATTGTTATTGGAAGAGGAGGACGGTAAAATGCACTTTAGTCTTAAAAAAATACAGGAAACAGAAAATGCTAACACCAAAAAGGCGAAAAGAAAAAAGAAACTAAAAGAAAAGATGAGAGAAGAGAAGCAGTCCTTACCAGACTTCGAAATAAACCTGGACGACCAACGTTTCTCTGCAATTTACAATTCACATCATTTTAATATCGACCCCAGCGATCCTAACTTCAAGAAGACCAAAAACATGGAGAAACTAATTCAAGAAAAATTAAAAAGAAGGCCGGCCGATACTGCTTCTTCCGAAGTAGATACTAAAAGGAGTAAAGAGGATATTGAATTAAGCTTATTAGTAAAAAATGTTAAAAGGAAAACTGGGAACATGAAATAA

Protein

MSNILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTENLRKYYDLDESDDSEDSDEEKAEEPGRFVKRPSTDDESIDKIDPKTLNDKLTRGKLDKKIKTRLLDLDIDYARGEGVLLTDSSSEAESSDTEDDSEMEHEWGELDADAETTEESTRRIAICNMDWDNIKASDLMVLLNSFIPPGGIIHKISIYPSEFGLKRMQEEEVRGPIELTTEKSENLPEDGGNEEGSTYHMEKLRRYQLNRLKYFYAVVECDTVTTADKLYNECDGMEYESSATRLDMRFIPDNVTFDHEPREVCSKLPDLRKYKPRLFTTTALQQAKVELTWDATNPNRTEIIKNALDGKIEDLDLKEYLASSSDESEDENQPKKIESNIQSDDDNEDPIQKYKLLLDEIDKKEEKKKNKDMEMEITWGLGIKEKAQELVKKKQDEGNANLTPFEQLLKKRKEKKRLKKMKKMKDSKQDEDDNSDNVSDDVPSDIDMNDPYFAEEFNKPEFKGTKGKSKVNPTSNENIEHDEEKKKAELELLLEEEDGKMHFSLKKIQETENANTKKAKRKKKLKEKMREEKQSLPDFEINLDDQRFSAIYNSHHFNIDPSDPNFKKTKNMEKLIQEKLKRRPADTASSEVDTKRSKEDIELSLLVKNVKRKTGNMK

Uniprot

H9J7C0   A0A2H1WQT0   A0A1E1W2A2   A0A2A4JBV4   A0A212FFU6   A0A3S2NNG1   + More
A0A194RH31   A0A1Y1KHI4   D1ZZY9   A0A1W4WIL0   K7J9Q5   A0A195B7B1   A0A336LQA1   A0A226DBV4   B4JLB3   A0A0P5W897   A0A0P5VEA3   E0VIN6   A0A0P5V6M1   A0A0P5V0G7   U4UHB9   A0A0J7KMD0   Q17MJ7   A0A067RBX4   A0A1W4VSI5   A0A0P5STT7   A0A0P5E9Y9   A0A195DXB8   E2BW94   A0A2H8TDJ4   A0A151XD72   E9J3D7   A0A195CI36   A0A1J1IAW5   A0A195FQ16   E2AII9   A0A158NGY8   U5ESF6   A0A232EVN7   A0A1A9WCM7   F4X135   A0A0M9A760   A0A026WYT6   N6TRY7   A0A0P5H4I0   A0A0P5FW50   A0A1B6D9T8   A0A0P6HAQ6   A0A0P6H7Y6   A0A0P5K7J8   A0A0P5A722   A0A0P5XXY6   A0A0P5GLX4   A0A0P5T817   T1I2H2   A0A0P5UCY6   A0A023F0N8   A0A0V0G7T7   A0A069DWB9   E9GIS0   A0A0P5PA25  

Pubmed

19121390    22118469    26354079    28004739    18362917    19820115    + More
20075255    17994087    20566863    23537049    17510324    24845553    20798317    21282665    21347285    28648823    21719571    24508170    25474469    26334808    21292972   

EMBL

BABH01013632    ODYU01010002    SOQ54794.1    GDQN01009990    JAT81064.1    NWSH01002158    + More
PCG69034.1    AGBW02008764    OWR52606.1    RSAL01000025    RVE52134.1    KQ460397    KPJ15241.1    GEZM01083935    JAV60929.1    KQ971338    EFA01774.1    AAZX01005119    AAZX01013563    KQ976574    KYM80142.1    UFQT01000108    SSX20120.1    LNIX01000025    OXA42689.1    CH916370    EDW00366.1    GDIP01090041    LRGB01000704    JAM13674.1    KZS16527.1    GDIP01101186    JAM02529.1    DS235201    EEB13242.1    GDIP01104133    JAL99581.1    GDIP01106732    JAL96982.1    KB632354    ERL93364.1    LBMM01005415    KMQ91538.1    CH477205    EAT47927.1    KK852559    KDR21391.1    GDIP01142739    JAL60975.1    GDIP01149581    JAJ73821.1    KQ980204    KYN17254.1    GL451103    EFN79998.1    GFXV01000372    MBW12177.1    KQ982294    KYQ58299.1    GL768061    EFZ12670.1    KQ977721    KYN00396.1    CVRI01000047    CRK97429.1    KQ981387    KYN42014.1    GL439791    EFN66779.1    ADTU01015336    GANO01003267    JAB56604.1    NNAY01001974    OXU22411.1    GL888525    EGI59846.1    KQ435727    KOX77846.1    KK107063    EZA60993.1    APGK01057295    KB741279    ENN71056.1    GDIQ01254974    JAJ96750.1    GDIQ01254973    JAJ96751.1    GEDC01014837    JAS22461.1    GDIQ01023154    JAN71583.1    GDIQ01023306    JAN71431.1    GDIQ01189405    JAK62320.1    GDIP01203216    JAJ20186.1    GDIP01067033    JAM36682.1    GDIQ01245982    JAK05743.1    GDIP01136120    JAL67594.1    ACPB03001319    GDIP01114846    JAL88868.1    GBBI01003655    JAC15057.1    GECL01002304    JAP03820.1    GBGD01000684    JAC88205.1    GL732546    EFX80841.1    GDIQ01133684    JAL18042.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053240    UP000007266    + More
UP000192223    UP000002358    UP000078540    UP000198287    UP000001070    UP000076858    UP000009046    UP000030742    UP000036403    UP000008820    UP000027135    UP000192221    UP000078492    UP000008237    UP000075809    UP000078542    UP000183832    UP000078541    UP000000311    UP000005205    UP000215335    UP000091820    UP000007755    UP000053105    UP000053097    UP000019118    UP000015103    UP000000305   

PRIDE

H9J7C0   

Pfam

PF08159   NUC153        + More
PF06093   Spt4
PF00628   PHD

Interpro

IPR012580   NUC153        + More
IPR039754   Esf1       
IPR022800   Spt4/RpoE2_Znf       
IPR038510   Spt4_sf       
IPR029040   RPABC4/Spt4       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       

SUPFAM

SSF63393   SSF63393        + More
SSF57903   SSF57903       

Gene 3D

3.30.40.210     3.30.40.10    

CDD

cd07973  Spt4

ProteinModelPortal

H9J7C0   A0A2H1WQT0   A0A1E1W2A2   A0A2A4JBV4   A0A212FFU6   A0A3S2NNG1   + More
A0A194RH31   A0A1Y1KHI4   D1ZZY9   A0A1W4WIL0   K7J9Q5   A0A195B7B1   A0A336LQA1   A0A226DBV4   B4JLB3   A0A0P5W897   A0A0P5VEA3   E0VIN6   A0A0P5V6M1   A0A0P5V0G7   U4UHB9   A0A0J7KMD0   Q17MJ7   A0A067RBX4   A0A1W4VSI5   A0A0P5STT7   A0A0P5E9Y9   A0A195DXB8   E2BW94   A0A2H8TDJ4   A0A151XD72   E9J3D7   A0A195CI36   A0A1J1IAW5   A0A195FQ16   E2AII9   A0A158NGY8   U5ESF6   A0A232EVN7   A0A1A9WCM7   F4X135   A0A0M9A760   A0A026WYT6   N6TRY7   A0A0P5H4I0   A0A0P5FW50   A0A1B6D9T8   A0A0P6HAQ6   A0A0P6H7Y6   A0A0P5K7J8   A0A0P5A722   A0A0P5XXY6   A0A0P5GLX4   A0A0P5T817   T1I2H2   A0A0P5UCY6   A0A023F0N8   A0A0V0G7T7   A0A069DWB9   E9GIS0   A0A0P5PA25  

KEGG

101742563    no KO assigned | (RefSeq) ESF1 homolog

GO

GO:0006364   GO:0005634   GO:0003723   GO:0046872   GO:0003677   GO:0006355   GO:0016491   GO:0016638   GO:0016021   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

PANTHER

PTHR12202  

Length:

675

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04309

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00260

outside

1  -  675

 

 

Pi

232.777674

Theta

179.720867

Tajima's D

0.839685

CLR

0.624399

CSRT

0.613169341532923

Interpretation

Uncertain