Gene

KWMTBOMO04434  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005386

Annotation

PREDICTED:_arf-GAP_with_coiled-coil?_ANK_repeat_and_PH_domain-containing_protein_2_[Bombyx_mori]

Location

Bomo_Chr8(-):6661075-6669592      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.398

CDS

ATGCGTAACGATACAAAAATATTAGACAAAGAGATGGAGAATCGTCATACGATTGTAAACAGTAAAGACACAGTGTTGCCAAGCTGTAAAACAAATTCCGAAGGCGATTCAAAAGAGGGTTTGTTGAGTACGCCTTGCCTCAAAAATCTGCCTAGGATGCAAGGCTACTTGTTCAAGCGGACATCGAACGCTTTCAAGACTTGGAACAGAAGATGGTTTTATCTATATGACAACAGACTTGTTTACAGAAAAAGAACGGGCGAATTGAATGTAACGGTGATGGAAGAAGACCTAAGGTTATGTACAGTGAAGCCGGTTCACGACGGCGAACGAAGATTCTGTTTCGAAGTATTGTCGCCATCTAAAAGTCACATGCTCCAAGCGGACTCCGAGGAGATGTTGAGCTGCTGGATAGCGGCGCTGCAGAGCGGCATCCGCTCGGCGATACAGCAGGGCCAGAGCCGAGAGAACCCGGAGTCGCAGCTAGTGCTCGTGCCGGACGACACGAGGCTCAGCGACACCAGACGGAACACGACCAGTGTCGCCATGAAGAAAGTTAGGATTTGGGAGCAACTTCTCAGCATTCCCGGGAACAATTATTGTTGTGATTGCGGTAGTCCGAACCCGAGGTGGGCGAGCATTAATCTCGGCATCACACTATGTATAGAATGCTCGGGAATACACCGTTCGCTGGGCGTGCACGTCAGTAAAGTCAGGTCTCTGACGCTCGATGACTGGGAACCGGAAATTATAAAGGTAATGGCCGAACTAGGGAACAAATTAGTGAATTTAATATATGAAGCTAACACAGAGGGCGCGACTGTTGCCAGAGCGACGCCGGATTGTGAAACTTGTGTTCGCGAAGCGTGGATCCGTGCTAAGTACGTCTCGCTGATGTTTGTACGAGAGCTCGTGAACTTTGATGCCCTCGAACAGTCTCCTCTCAAGTCCGGCAGACGCTGGTCCGTTAGAAGAGCTCGACGAAGGTAA

Protein

MRNDTKILDKEMENRHTIVNSKDTVLPSCKTNSEGDSKEGLLSTPCLKNLPRMQGYLFKRTSNAFKTWNRRWFYLYDNRLVYRKRTGELNVTVMEEDLRLCTVKPVHDGERRFCFEVLSPSKSHMLQADSEEMLSCWIAALQSGIRSAIQQGQSRENPESQLVLVPDDTRLSDTRRNTTSVAMKKVRIWEQLLSIPGNNYCCDCGSPNPRWASINLGITLCIECSGIHRSLGVHVSKVRSLTLDDWEPEIIKVMAELGNKLVNLIYEANTEGATVARATPDCETCVREAWIRAKYVSLMFVRELVNFDALEQSPLKSGRRWSVRRARRR

Uniprot

A0A2H1WK09   A0A3S2M6K6   A0A2A4J2N2   A0A1E1WP67   A0A194RH36   A0A194PY68   + More
D6X007   V5G2T3   A0A1W4XCI4   A0A067QVP5   A0A0C9RAI7   A0A1Y1L0G4   U4TZ47   A0A026VW25   A0A1B6I8C3   A0A1B6JJY1   A0A0J7L2Q0   N6SY22   E2C8T5   A0A154PSJ2   E9IVA0   E0W416   A0A1B6G7X6   A0A195C0F7   A0A0L7R3V4   A0A088AQD7   A0A151XHS4   A0A195FJ28   A0A2A3EAS8   A0A151I1C4   A0A158NDC8   A0A195DIU9   A0A2J7RRG9   F4WSP8   A0A2S2QYY7   A0A1Z5L5T8   A0A1E1XLH1   A0A147BQ29   A0A0A9YW47   A0A224YNB7   A0A131YD08   A0A131YXS2   A0A224XK51   A0A023F1X2   T1HYS0   L7MLR8   A0A146LN58   A0A1Q3F8P6   A0A1Q3F8K6   A0A2S2P373   B0WGF7   A0A1L8DLQ1   A0A1Q3F8V5   A0A2P8YQI4   A0A2J7RRG6   A0A1I8MUL5   A0A1Q3F8W4   W8BCJ3   A0A182GI07   A0A0A1XLV6   A0A2S2P461   A0A1B0AA11   A0A2R7W9G8   Q17GT7   A0A2H8TL56   B4HFB4   A0A1I8NN18   A0A0K2TS28   A0A1A9V7L7   A0A034VCF6   A0A1B0FKP7   Q8T0R1   A0A0K8UT23   A0A3R7PUZ4   A0A0K8W9W7   B3P7G1   B4PN46   A0A1A9YPY6   A0A1W4UQN6   Q9VCQ6   B4R1D5   A0A0K8UMX9   A0A0K8V1I0   A0A1I8MUK8   A0A0K8UW58   W8AQ27   A0A0K8VBN8   A0A0K8VGF7   A0A3B0JLI3   A0A0P6JSK4   B3LV47   A0A1S4F367   A0A336N3D1   A0A210QD91   A0A1I8NN22   A0A0K8VNT4   A0A034V833   A0A336MYX3   A0A0K8U504   A0A0R1E8R9  

Pubmed

26354079    18362917    19820115    24845553    28004739    23537049    + More
24508170    30249741    20798317    21282665    20566863    21347285    21719571    28528879    29209593    29652888    25401762    28797301    26830274    25474469    25576852    26823975    29403074    25315136    24495485    26483478    25830018    17510324    17994087    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26999592    28812685   

EMBL

ODYU01009153    SOQ53378.1    RSAL01000025    RVE52141.1    NWSH01003543    PCG66129.1    + More
GDQN01002235    JAT88819.1    KQ460397    KPJ15246.1    KQ459589    KPI97694.1    KQ971372    EFA10505.1    GALX01004141    JAB64325.1    KK852890    KDR14272.1    GBYB01013474    JAG83241.1    GEZM01068131    JAV67159.1    KB631874    ERL86864.1    KK107737    QOIP01000013    EZA47962.1    RLU15490.1    GECU01024547    JAS83159.1    GECU01008110    JAS99596.1    LBMM01001089    KMQ96943.1    APGK01052697    KB741213    ENN72674.1    GL453694    EFN75652.1    KQ435036    KZC14080.1    GL766194    EFZ15490.1    DS235886    EEB20372.1    GECZ01011213    JAS58556.1    KQ978379    KYM94389.1    KQ414661    KOC65557.1    KQ982130    KYQ59838.1    KQ981560    KYN39989.1    KZ288317    PBC28296.1    KQ976599    KYM79511.1    ADTU01012601    KQ980800    KYN12813.1    NEVH01000606    PNF43424.1    GL888326    EGI62791.1    GGMS01013763    MBY82966.1    GFJQ02004330    JAW02640.1    GFAA01003234    JAU00201.1    GEGO01002528    JAR92876.1    GBHO01009824    GBHO01009823    JAG33780.1    JAG33781.1    GFPF01006093    MAA17239.1    GEDV01012207    JAP76350.1    GEDV01005282    JAP83275.1    GFTR01007903    JAW08523.1    GBBI01003170    JAC15542.1    ACPB03018499    GACK01000801    JAA64233.1    GDHC01010407    JAQ08222.1    GFDL01011123    JAV23922.1    GFDL01011144    JAV23901.1    GGMR01010717    MBY23336.1    DS231926    EDS26954.1    GFDF01006691    JAV07393.1    GFDL01011040    JAV24005.1    PYGN01000431    PSN46505.1    PNF43422.1    GFDL01011078    JAV23967.1    GAMC01015664    JAB90891.1    JXUM01011936    JXUM01011937    JXUM01011938    JXUM01011939    JXUM01011940    JXUM01011941    JXUM01011942    KQ560341    KXJ82961.1    GBXI01002719    JAD11573.1    GGMR01011591    MBY24210.1    KK854417    PTY15690.1    CH477256    EAT45850.1    GFXV01002597    MBW14402.1    CH480815    EDW43292.1    HACA01011462    CDW28823.1    GAKP01019477    JAC39475.1    CCAG010000730    AY069114    AAL39259.1    GDHF01022646    JAI29668.1    QCYY01000697    ROT83368.1    GDHF01004331    JAI47983.1    CH954182    EDV54050.1    CM000160    EDW98101.1    AE014297    AF254071    BT122085    AAF56100.1    AAF64529.1    ADE06691.1    CM000364    EDX14021.1    GDHF01024378    JAI27936.1    GDHF01019560    JAI32754.1    GDHF01021503    JAI30811.1    GAMC01015665    JAB90890.1    GDHF01016072    JAI36242.1    GDHF01014348    JAI37966.1    OUUW01000005    SPP81192.1    GDUN01000349    JAN95570.1    CH902617    EDV42519.1    UFQT01004194    SSX35563.1    NEDP02004099    OWF46700.1    GDHF01011772    JAI40542.1    GAKP01019476    JAC39476.1    SSX35562.1    GDHF01030651    JAI21663.1    KRK04113.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000007266    UP000192223    + More
UP000027135    UP000030742    UP000053097    UP000279307    UP000036403    UP000019118    UP000008237    UP000076502    UP000009046    UP000078542    UP000053825    UP000005203    UP000075809    UP000078541    UP000242457    UP000078540    UP000005205    UP000078492    UP000235965    UP000007755    UP000015103    UP000002320    UP000245037    UP000095301    UP000069940    UP000249989    UP000092445    UP000008820    UP000001292    UP000095300    UP000078200    UP000092444    UP000283509    UP000008711    UP000002282    UP000092443    UP000192221    UP000000803    UP000000304    UP000268350    UP000007801    UP000242188   

PRIDE

Q8T0R1   

Pfam

PF00169   PH        + More
PF01412   ArfGap
PF12796   Ank_2

Interpro

IPR037278   ARFGAP/RecO        + More
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR038508   ArfGAP_dom_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR001164   ArfGAP_dom       
IPR027267   AH/BAR_dom_sf       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR038584   L33_sf       

SUPFAM

SSF57863   SSF57863        + More
SSF103657   SSF103657       
SSF48403   SSF48403       

Gene 3D

1.20.1270.60     1.25.40.20     2.30.29.30     3.30.40.160     2.20.28.120    

CDD

cd00204  ANK

ProteinModelPortal

A0A2H1WK09   A0A3S2M6K6   A0A2A4J2N2   A0A1E1WP67   A0A194RH36   A0A194PY68   + More
D6X007   V5G2T3   A0A1W4XCI4   A0A067QVP5   A0A0C9RAI7   A0A1Y1L0G4   U4TZ47   A0A026VW25   A0A1B6I8C3   A0A1B6JJY1   A0A0J7L2Q0   N6SY22   E2C8T5   A0A154PSJ2   E9IVA0   E0W416   A0A1B6G7X6   A0A195C0F7   A0A0L7R3V4   A0A088AQD7   A0A151XHS4   A0A195FJ28   A0A2A3EAS8   A0A151I1C4   A0A158NDC8   A0A195DIU9   A0A2J7RRG9   F4WSP8   A0A2S2QYY7   A0A1Z5L5T8   A0A1E1XLH1   A0A147BQ29   A0A0A9YW47   A0A224YNB7   A0A131YD08   A0A131YXS2   A0A224XK51   A0A023F1X2   T1HYS0   L7MLR8   A0A146LN58   A0A1Q3F8P6   A0A1Q3F8K6   A0A2S2P373   B0WGF7   A0A1L8DLQ1   A0A1Q3F8V5   A0A2P8YQI4   A0A2J7RRG6   A0A1I8MUL5   A0A1Q3F8W4   W8BCJ3   A0A182GI07   A0A0A1XLV6   A0A2S2P461   A0A1B0AA11   A0A2R7W9G8   Q17GT7   A0A2H8TL56   B4HFB4   A0A1I8NN18   A0A0K2TS28   A0A1A9V7L7   A0A034VCF6   A0A1B0FKP7   Q8T0R1   A0A0K8UT23   A0A3R7PUZ4   A0A0K8W9W7   B3P7G1   B4PN46   A0A1A9YPY6   A0A1W4UQN6   Q9VCQ6   B4R1D5   A0A0K8UMX9   A0A0K8V1I0   A0A1I8MUK8   A0A0K8UW58   W8AQ27   A0A0K8VBN8   A0A0K8VGF7   A0A3B0JLI3   A0A0P6JSK4   B3LV47   A0A1S4F367   A0A336N3D1   A0A210QD91   A0A1I8NN22   A0A0K8VNT4   A0A034V833   A0A336MYX3   A0A0K8U504   A0A0R1E8R9  

PDB

4F1P     E-value=7.57504e-39,     Score=402

KEGG

101742418    K12489 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein | (RefSeq) arf-GAP with

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0005096   GO:0046872   GO:0008643   GO:0000902   GO:0043087   GO:0005543   GO:0016020   GO:0016021   GO:0003677   GO:0006355   GO:0016491   GO:0016638   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

Length:

329

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00868999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.32806

outside

1  -  329

 

 

Pi

210.233424

Theta

174.393772

Tajima's D

0.551004

CLR

0.009399

CSRT

0.526973651317434

Interpretation

Uncertain