Gene

KWMTBOMO04431

Pre Gene Modal

BGIBMGA005388

Annotation

PREDICTED:_transmembrane_protein_19_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr8(-):6587436-6591722      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.7

CDS

ATGTCCGAAAAGGAAACTAAATTCATTAAGAATGAACACGTATTAACCGTGGCTTTGTGCTCCATAGCAATACCACTGTCTATGTCTATGTGGATAATTAATATAATTTATTCCAAATATCTTGCAGAAAATTCGAGTTATGATGAACCTATTGTTATACCACCAACAAAATGGATGGTATCATGTTTTATTCCCCTTCTTATAGCAGTTTATGGATACAAGAAGAGAAGCATAAATTTAAGTGGAGCAGTTAGTGGGTTACTTATAGCATTCATTTTAACACTTAGTAGTTATGGATTTTTAGCTGCTATTTTCACATTTTTCATTACTTCATCAAAAGCTACTAAAGTAAAGTCACATTTGAAGAGGAAATTTGAAGCTGATTTTAAGGAAGGTGGACAAAGGAATTGGATACAAGTGCTGTGTAATGGTGGTATGGCAGCTCAGCTTGCATTGTTGTATCTATTGGATGTGGGATCATCCGAGCGCCCTATTGATTTTGTGAAGGATTACAGATCTTCTTGGTTGTCTATTGGAATTTTAGGTGTTTTTGCATGCTGCAATGGTGACACATGGGCTTCAGAAATTGGAACAGTTTTTTCTAGTTCAGATCCATATTTAATTACATCTTGGAAGAAAGTGCCTAGGGGCACAAATGGTGGTGTCACTTTTATTGGAACAGTATTTAGTGGTCTTGGAGGATTTGTGATTGGATTGAGCCAGTATTTTGTACTTTACTTGTTCTCAGACAAAAGTTCTTGGGATTATGCTCCACCACAATGGCCTATTATACTGATGGGCACAATTTCTGGTTTATTAGGCAGTTTAGTAGATTCTATATTGGGAGCAACTTTGCAGTTTTCAGGTTTGAACAAAGAAGGAAAAATTGTAAATCATTCCTATGACGCAGTTAAACATATCTCTGGCTGGAATATTCTAGACAATCACAGTGTAAACCTAATATCAACTATCATTATAGGCTATCTTCGGTACATCACGCTATGA

Protein

MSEKETKFIKNEHVLTVALCSIAIPLSMSMWIINIIYSKYLAENSSYDEPIVIPPTKWMVSCFIPLLIAVYGYKKRSINLSGAVSGLLIAFILTLSSYGFLAAIFTFFITSSKATKVKSHLKRKFEADFKEGGQRNWIQVLCNGGMAAQLALLYLLDVGSSERPIDFVKDYRSSWLSIGILGVFACCNGDTWASEIGTVFSSSDPYLITSWKKVPRGTNGGVTFIGTVFSGLGGFVIGLSQYFVLYLFSDKSSWDYAPPQWPIILMGTISGLLGSLVDSILGATLQFSGLNKEGKIVNHSYDAVKHISGWNILDNHSVNLISTIIIGYLRYITL

Uniprot

A0A2H1WK07   A0A194RCB9   S4NIZ4   A0A3S2PI88   A0A194PXE6   A0A212EH75   + More
A0A0L7LD84   A0A182FUW4   A0A182MYI3   A0A2M4AUL5   J9JQ79   A0A2M4BTZ1   A0A182Y1U6   A0A182MTN9   A0A182SCX5   E2BWX7   A0A182JNY9   A0A026WSJ5   A0A182W978   A0A182PBP9   W5JCI4   E2AKI6   A0A2J7R192   A0A182USA6   Q7Q059   A0A182TWZ7   A0A182HQ12   A0A182XD82   A0A182KSP9   A0A1I8PEQ2   A0A195BHN7   A0A1B6DT90   A0A158NJW3   A0A195F414   A0A067R026   A0A084WHY4   Q2M024   B4H8Y6   A0A182JJF8   A0A3B0J955   A0A0L7QNF3   F4WIN5   A0A151XE27   A0A154PMB8   B4KZP2   A0A182R5F8   Q172X0   B0WTM0   A0A1L8D9E0   A0A088A7H5   A0A1L8D8Z9   A0A182QDF4   K7J017   A0A1S4FG33   E0W1N2   A0A0M8ZQN4   A0A1W7R551   A0A2A3EDA6   A0A1I8MKQ1   A0A0L0BVE1   A0A232EPW0   A0A1Q3F9F6   T1PIW8   T1HYQ3   B4LCH1   A0A151I852   A0A069DYL5   A0A0P4W2X8   A0A0K8TQ39   B4PHE2   A0A1B6FGK0   A0A224XNL5   W8C2H0   A0A0M4ELX5   E9IMF5   B4J177   A0A1A9WEM5   A0A023F438   A0A336MJW5   A0A1B6KHV0   A0A0K8TX67   A0A195DV96   A0A0K8VXS7   A0A3S3PIU9   Q9VU64   A0A2S2QVY9   A0A1I8PEZ9   A0A0C9Q1K6   A0A0K8W8Q5   B4HGS0   A0A1A9Y0W9   A0A1B0B6V8   A0A1A9Y0W8   A0A1B0AI87   Q8IQJ7   D3TNA2   A0A1A9V3T8   B3NHE3   Q6AWL9   L7M380  

Pubmed

26354079    23622113    22118469    26227816    25244985    20798317    + More
24508170    30249741    20920257    23761445    12364791    20966253    21347285    24845553    24438588    15632085    17994087    21719571    17510324    20075255    20566863    25315136    26108605    28648823    26334808    27129103    26369729    17550304    24495485    21282665    25474469    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    18057021    25576852   

EMBL

ODYU01009153    SOQ53379.1    KQ460397    KPJ15247.1    GAIX01013879    JAA78681.1    + More
RSAL01000025    RVE52143.1    KQ459589    KPI97693.1    AGBW02014942    OWR40839.1    JTDY01001577    KOB73478.1    GGFK01011149    MBW44470.1    ABLF02033194    ABLF02033200    GGFJ01007270    MBW56411.1    AXCM01002401    GL451188    EFN79841.1    KK107135    QOIP01000006    EZA58064.1    RLU21931.1    ADMH02001912    ETN60539.1    GL440281    EFN66037.1    NEVH01008208    PNF34594.1    AAAB01008986    EAA00240.3    APCN01003288    KQ976465    KYM84315.1    GEDC01011392    GEDC01008410    JAS25906.1    JAS28888.1    ADTU01018427    KQ981820    KYN35320.1    KK852804    KDR16175.1    ATLV01023896    KE525347    KFB49828.1    CH379069    EAL31112.1    CH479226    EDW35201.1    AXCP01006759    OUUW01000002    SPP76452.1    KQ414851    KOC60172.1    GL888176    EGI65971.1    KQ982254    KYQ58615.1    KQ434978    KZC13031.1    CH933809    EDW18998.1    CH477430    EAT41058.1    EJY57675.1    DS232089    EDS34473.1    GFDF01011117    JAV02967.1    GFDF01011118    JAV02966.1    AXCN02001041    DS235872    EEB19538.1    KQ435960    KOX67996.1    GEHC01001348    JAV46297.1    KZ288279    PBC29698.1    JRES01001278    KNC24007.1    NNAY01002882    OXU20390.1    GFDL01010869    JAV24176.1    KA648752    AFP63381.1    ACPB03018501    CH940647    EDW69834.1    KQ978390    KYM94290.1    GBGD01002180    JAC86709.1    GDKW01000746    JAI55849.1    GDAI01001119    JAI16484.1    CM000159    EDW94403.1    GECZ01020443    JAS49326.1    GFTR01005018    JAW11408.1    GAMC01003132    JAC03424.1    CP012525    ALC44547.1    GL764146    EFZ18246.1    CH916366    EDV97946.1    GBBI01002963    JAC15749.1    UFQT01001439    UFQT01002855    SSX30576.1    SSX34157.1    GEBQ01028968    JAT11009.1    GDHF01033262    JAI19052.1    KQ980304    KYN16771.1    GDHF01008655    JAI43659.1    NCKU01002085    RWS10469.1    AE014296    AY061341    AAF49826.1    AAL28889.1    GGMS01012713    MBY81916.1    GBYB01007763    JAG77530.1    GDHF01004900    JAI47414.1    CH480815    EDW41378.1    JXJN01009256    BT046137    AAN11833.1    ACI46525.1    CCAG010000259    EZ422904    ADD19180.1    CH954178    EDV51669.1    KQS43887.1    BT015229    AAT94458.1    GACK01007466    JAA57568.1   

Proteomes

UP000053240    UP000283053    UP000053268    UP000007151    UP000037510    UP000069272    + More
UP000075884    UP000007819    UP000076408    UP000075883    UP000075901    UP000008237    UP000075881    UP000053097    UP000279307    UP000075920    UP000075885    UP000000673    UP000000311    UP000235965    UP000075903    UP000007062    UP000075902    UP000075840    UP000076407    UP000075882    UP000095300    UP000078540    UP000005205    UP000078541    UP000027135    UP000030765    UP000001819    UP000008744    UP000075880    UP000268350    UP000053825    UP000007755    UP000075809    UP000076502    UP000009192    UP000075900    UP000008820    UP000002320    UP000005203    UP000075886    UP000002358    UP000009046    UP000053105    UP000242457    UP000095301    UP000037069    UP000215335    UP000015103    UP000008792    UP000078542    UP000002282    UP000092553    UP000001070    UP000091820    UP000078492    UP000285301    UP000000803    UP000001292    UP000092443    UP000092460    UP000092445    UP000092444    UP000078200    UP000008711   

PRIDE

Q9VU64    Q8IQJ7    Q6AWL9   

Pfam

PF01940   DUF92        + More
PF07690   MFS_1
PF07165   DUF1397

Interpro

IPR002794   DUF92_TMEM19        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR009832   DUF1397       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1WK07   A0A194RCB9   S4NIZ4   A0A3S2PI88   A0A194PXE6   A0A212EH75   + More
A0A0L7LD84   A0A182FUW4   A0A182MYI3   A0A2M4AUL5   J9JQ79   A0A2M4BTZ1   A0A182Y1U6   A0A182MTN9   A0A182SCX5   E2BWX7   A0A182JNY9   A0A026WSJ5   A0A182W978   A0A182PBP9   W5JCI4   E2AKI6   A0A2J7R192   A0A182USA6   Q7Q059   A0A182TWZ7   A0A182HQ12   A0A182XD82   A0A182KSP9   A0A1I8PEQ2   A0A195BHN7   A0A1B6DT90   A0A158NJW3   A0A195F414   A0A067R026   A0A084WHY4   Q2M024   B4H8Y6   A0A182JJF8   A0A3B0J955   A0A0L7QNF3   F4WIN5   A0A151XE27   A0A154PMB8   B4KZP2   A0A182R5F8   Q172X0   B0WTM0   A0A1L8D9E0   A0A088A7H5   A0A1L8D8Z9   A0A182QDF4   K7J017   A0A1S4FG33   E0W1N2   A0A0M8ZQN4   A0A1W7R551   A0A2A3EDA6   A0A1I8MKQ1   A0A0L0BVE1   A0A232EPW0   A0A1Q3F9F6   T1PIW8   T1HYQ3   B4LCH1   A0A151I852   A0A069DYL5   A0A0P4W2X8   A0A0K8TQ39   B4PHE2   A0A1B6FGK0   A0A224XNL5   W8C2H0   A0A0M4ELX5   E9IMF5   B4J177   A0A1A9WEM5   A0A023F438   A0A336MJW5   A0A1B6KHV0   A0A0K8TX67   A0A195DV96   A0A0K8VXS7   A0A3S3PIU9   Q9VU64   A0A2S2QVY9   A0A1I8PEZ9   A0A0C9Q1K6   A0A0K8W8Q5   B4HGS0   A0A1A9Y0W9   A0A1B0B6V8   A0A1A9Y0W8   A0A1B0AI87   Q8IQJ7   D3TNA2   A0A1A9V3T8   B3NHE3   Q6AWL9   L7M380  

KEGG

101742031    no KO assigned | (RefSeq) transmembrane protein 19

GO

GO:0016021   GO:0055085   GO:0016020   GO:0003677   GO:0006355   GO:0016491   GO:0016638   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

PANTHER

PTHR13353  

Length:

334

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

135.93775

Exp number, first 60 AAs:

33.15554

Total prob of N-in:

0.62919

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  37

inside

38  -  49

TMhelix

50  -  72

outside

73  -  86

TMhelix

87  -  109

inside

110  -  220

TMhelix

221  -  243

outside

244  -  262

TMhelix

263  -  285

inside

286  -  334

 

 

Pi

208.505403

Theta

188.123627

Tajima's D

0.324943

CLR

0

CSRT

0.462176891155442

Interpretation

Possibly Positive selection