SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04430
Pre Gene Modal
BGIBMGA005389
Annotation
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.873
 

Sequence

CDS
ATGTCATCATTTGAAGAGAGTCCTATAATCAATGCTGATATTGAGGACGACGTTACGAATAGTCGTAGAAATCTAGTAGAAAATGAATTGGTGGAAGAAACAACTGGGTGGGTGAAATGTCGGACAGTTCTGGGTATAATGGGTTTTCTTGGTTTTGCCATAGTATATGCTATGAGAGTGAATTTATCAGTTGCAATTGTTGCCATGGTGAATTCCACTACACCCCAACCATCAAATGATTCCTCATTAGATGTATGTGAAGCCAATCCTGTTAGTAATACAACTAAACCTACAAATGGTGAATTTAATTGGACAGAACAGCAGCGCAGTCTGGTTTTAGGTTCATTCTTTTATGGTTACGTTCTAACACAGATACCGGGTGGTCGAATAGCAGAATTATATGGTGGGAAACTTGTCTATGGTTTAGGTATATTCTTCACTGCAGTATTTACAATATTAAGTCCTATTGCTGCATATACGAACTTCTGGTTCTTTATAATTGTACGAGCCCTGGCAGGATTGGCTGAAGGAGTCACATATCCTGCCATGCATGCTATGCTTGCTAAATGGATCCCACCTCTGGAAAGATCCAAGTTTGCAGCTTATGTTTATGCAGGTTCAAATATTGGAACAGTGGTCACATTACCAATATCAGGGTGGCTATGCACACTAGAGTTTGCAGGTGGATGGCCACTCTGTTTTTACATTTTCGGTGGACTCGGAGTGGTGTGGTTTATTGGATGGCTCTTCCTCATCTACGATTCACCACAAAAACACCCTAGGATATGTCCTAAAGAAATTGAATATATTGCAGGAAGCATAGGAAATGCAGAGGAAGAAAAACCCTCAATGCCGATACCATGGTGCAAGTTCCTGACGTGCGTTCCGCTGTGGGCCATCCTGATCGCGCAATGCGGACAATCGTGGGTCTTCTACACTCAGTTTACAGAAATGCCTACTTATATGGACAATATTCTGCATTTCGATATAGTATCTAACGCTGAACTGAGTGCGCTGCCGTATTTAACGGCTTGGATCGGCGGTGTGGTTCTGTGCACGATCGCGGACTGGACTATTGCTAAAGGATGGATCAGCCGACTCAATAGTATGAAACTCTGGAATACTGTTGCTGCGTTCTTGCCTGCGTTCGGCATCCTCGGCATCGCGTGGGCCGGCTGCGACAAGTTTGCGGTCATGTTGCTGCTAAGTGCAGCCTCGGCTTTCGGCGGAGCGTCTTATGCGGGTAACCAAATGAACCATATAGATCTGTCGCCGCAGTTCGCGGGCACGATGTACGGTATAACGAACGCAGCTAGCAACGTGTGCGGCTTCATGGCGCCGTACGTTGTCGGGCACATTATAAAGACAGATCAGCAAACCCTGGGTCAGTGGCGTGAAGTCTTTTATCTCGCGGCCGCTATCGATCTCGGAGCGAACTTGTTCTATTTGTTCTTCGCCAGTACCGAGGAGCAGGATTGGTCACGTCCGGACAACGACGACATGACAGCATCAGCCCCGGTCGAAAGTATTTTGTTCCCAGAGTCGTAG
Protein
MSSFEESPIINADIEDDVTNSRRNLVENELVEETTGWVKCRTVLGIMGFLGFAIVYAMRVNLSVAIVAMVNSTTPQPSNDSSLDVCEANPVSNTTKPTNGEFNWTEQQRSLVLGSFFYGYVLTQIPGGRIAELYGGKLVYGLGIFFTAVFTILSPIAAYTNFWFFIIVRALAGLAEGVTYPAMHAMLAKWIPPLERSKFAAYVYAGSNIGTVVTLPISGWLCTLEFAGGWPLCFYIFGGLGVVWFIGWLFLIYDSPQKHPRICPKEIEYIAGSIGNAEEEKPSMPIPWCKFLTCVPLWAILIAQCGQSWVFYTQFTEMPTYMDNILHFDIVSNAELSALPYLTAWIGGVVLCTIADWTIAKGWISRLNSMKLWNTVAAFLPAFGILGIAWAGCDKFAVMLLLSAASAFGGASYAGNQMNHIDLSPQFAGTMYGITNAASNVCGFMAPYVVGHIIKTDQQTLGQWREVFYLAAAIDLGANLFYLFFASTEEQDWSRPDNDDMTASAPVESILFPES

Summary

EMBL
BABH01013620    ODYU01009153    SOQ53380.1    KQ459589    KPI97692.1    KQ460397    + More
KPJ15250.1    AGBW02014942    OWR40838.1    JTDY01001577    KOB73478.1    KQ971362    EFA08919.1    APGK01040126    KB740975    ENN76567.1    GEZM01043148    GEZM01043147    JAV79273.1    KB632267    ERL91012.1    NEVH01011894    PNF31193.1    GAMC01010863    JAB95692.1    KK853581    KDR06530.1    JXJN01022449    GDHF01014203    JAI38111.1    UFQT01000753    SSX26986.1    GFDF01009219    JAV04865.1    NNAY01002243    OXU21743.1    GFDF01009218    JAV04866.1    GANO01002417    JAB57454.1    GFDF01009220    JAV04864.1    GBXI01014297    JAC99994.1    CM000366    EDX17788.1    KA645607    AFP60236.1    CH480836    EDW48979.1    CH954180    EDV47235.1    AE014298    BT133363    AAF48230.1    AFH36348.1    AHN59658.1    AHN59659.1    GAKP01003949    JAC55003.1    CP012528    ALC49104.1    CM000162    EDX01535.1    GFDF01009394    JAV04690.1    GFDF01009393    JAV04691.1    GFDF01009392    JAV04692.1    CH379064    EAL31894.2    AJWK01014691    GBYB01008860    JAG78627.1    CH940653    EDW62312.1    GL435242    EFN73678.1    ADTU01014820    KK107373    QOIP01000004    EZA51649.1    RLU23294.1    KQ976662    KYM78540.1    GL888818    EGI57887.1    JR037329    AEY57718.1    GL768221    EFZ11760.1    KQ979568    KYN20874.1    OUUW01000003    SPP77772.1    GL449511    EFN82610.1    LBMM01002177    KMQ95179.1    CH902622    EDV34440.1    KPU75141.1    KZ288219    PBC32234.1    CH933812    EDW05958.2    KRG07103.1    KQ982314    KYQ57918.1    KQ981864    KYN34262.1    CVRI01000026    CRK92382.1    KQ763450    OAD55056.1    KQ977754    KYN00113.1    KQ415041    KOC58896.1    LJIG01002547    KRT84393.1    KQ434782    KZC04621.1    CCAG010018157    CCAG010018158    BT010092    AAQ22561.1    GDIQ01124326    JAL27400.1    GDIQ01251248    GDIQ01249698    GDIQ01227001    GDIQ01203300    GDIQ01189313    GDIQ01139338    GDIQ01070551    GDIQ01067513    GDIQ01052814    JAN27224.1    GDIP01025660    JAM78055.1    GDIP01159548    JAJ63854.1    GDIP01209487    GDIP01134843    LRGB01003123    JAJ13915.1    KZS04440.1    GDIP01160390    JAJ63012.1    GDIP01161189    JAJ62213.1    GDIQ01212149    JAK39576.1    GDIP01097758    JAM05957.1    GDIP01020617    GDIQ01081904    JAM83098.1    JAN12833.1    GDIQ01139337    GDIQ01136879    JAL12389.1    GDIP01124148    GDIQ01081906    GDIQ01078698    JAL79566.1    JAN12831.1    GDIP01203389    JAJ20013.1    GDIQ01136882    JAL14844.1    GDIQ01009078    JAN85659.1    GDIQ01124327    JAL27399.1    GDIP01046314    JAM57401.1    GDIP01240647    JAI82754.1    GDIQ01161312    JAK90413.1    GDIP01047850    JAM55865.1    GDIP01210633    JAJ12769.1    GDIP01155089    JAJ68313.1    GDIP01209488    JAJ13914.1    GDRN01042058    JAI67078.1    GDRN01042061    GDRN01042060    GDRN01042059    JAI67077.1    GDIQ01234946    JAK16779.1    GDIP01174590    JAJ48812.1    GDIQ01195407    JAK56318.1    GDIP01174588    JAJ48814.1    GDIQ01155713    JAK96012.1   
Pfam
PF07690   MFS_1        + More
PF01940   DUF92
PF00071   Ras
PF07368   DUF1487
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR002794   DUF92_TMEM19       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
IPR009961   DUF1487       
SUPFAM
SSF103473   SSF103473        + More
SSF52540   SSF52540       
PDB
6E9N     E-value=4.17357e-18,     Score=225

Ontologies

Topology

Length:
515
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
232.4559
Exp number, first 60 AAs:
16.48742
Total prob of N-in:
0.29466
POSSIBLE N-term signal
sequence
outside
1  -  42
TMhelix
43  -  65
inside
66  -  137
TMhelix
138  -  160
outside
161  -  164
TMhelix
165  -  187
inside
188  -  198
TMhelix
199  -  221
outside
222  -  230
TMhelix
231  -  253
inside
254  -  290
TMhelix
291  -  313
outside
314  -  337
TMhelix
338  -  360
inside
361  -  371
TMhelix
372  -  391
outside
392  -  431
TMhelix
432  -  454
inside
455  -  466
TMhelix
467  -  486
outside
487  -  515
 
 

Population Genetic Test Statistics

Pi
208.942463
Theta
177.052828
Tajima's D
0.580509
CLR
2.2748
CSRT
0.540022998850057
Interpretation
Possibly Positive selection
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