SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04426  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005391
Annotation
pyridoxine_5'-phosphate_oxidase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.95
 

Sequence

CDS
ATGAGTATTGATATTGGTGGTATGAGAATTAAGTATAAAGAAAAAGATGAAACCTTTTTAGAGAAACACCTTGTATCTAAAGAACCTTTTGGACAATTCAAATCTTGGTTTGAAGAAGCTTGTGCTAGGAAAGAAATTCTGGAGCCCAATGCAATGTGTCTAGCTACAGTTTCACAGGAAGGTTTTCCATCAGCTCGGTTTGTTTTGTGCAAGGGTTATGGTAAAGAAGGATTCAAATTTTACACAAACTATGGAAGTAAAAAGGCTAAAGATATAGAAGGGAATCCTAACGTTGCTGCCACATTTTATTGGGAAATACTGAATAGATCAGTGAGAATTGAGGGCAGAGTAGAAAAACTTTCAGAAGATGATTCTACAAAATATTTTCATACACGACCAGTAGTCAGCCAGATTGCTGCATGTGCAAGCTACCAAAGTACTCCAATAGAGTCCAGAGATGTTCTGTGTGAAAGAGAAAAGCTTCTTGAACAGCAATATATGATACCTGGTAAAGAAGTTCCGAAACCAAGCTACTGGGGAGGATATCTCTTAATTCCAAGGTCTGTCGAATTCTGGCAAGGTCAGAGGGACCGGCTTCATGATCGCATCAAATTCAGAAGACCCAATAAAGGAGAAGTGTCTGATGAAAGATTATTACATGAAGGTGAAGATGGGTGGGTTTTTGAGCGACTTTCACCATAG
Protein
MSIDIGGMRIKYKEKDETFLEKHLVSKEPFGQFKSWFEEACARKEILEPNAMCLATVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQQYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRPNKGEVSDERLLHEGEDGWVFERLSP

Summary

EMBL
BABH01013608    DQ452398    ABE28379.1    NWSH01004148    PCG65425.1    KQ460397    + More
KPJ15254.1    ODYU01011099    SOQ56625.1    AK401957    BAM18579.1    KQ459589    KPI97688.1    GAIX01014123    JAA78437.1    JTDY01000856    KOB75659.1    AGBW02014758    OWR41109.1    BABH01003437    BABH01003438    NNAY01000601    OXU27448.1    KK107455    QOIP01000010    EZA50449.1    RLU17344.1    QCYY01002868    ROT66995.1    GECU01012817    JAS94889.1    KQ976618    KYM79252.1    KQ435855    KOX70645.1    ADTU01022976    KQ980658    KYN14759.1    NEVH01025161    PNF15571.1    KQ981382    KYN42170.1    GDRN01099300    JAI58795.1    GL439754    EFN66834.1    KZ288230    PBC31642.1    MRZV01001469    PIK37677.1    GL888218    EGI64533.1    GEBQ01005417    JAT34560.1    GDRN01099303    GDRN01099298    GDRN01099297    JAI58794.1    DS235129    EEB12304.1    GBYB01001345    GBYB01001346    GBYB01004701    GBYB01012013    JAG71112.1    JAG71113.1    JAG74468.1    JAG81780.1    GEDC01031423    GEDC01003743    JAS05875.1    JAS33555.1    IACF01002803    LAB68442.1    GG666499    EEN62174.1    LJIJ01008633    ODM75294.1    OWR41108.1    KQ434822    KZC07183.1    LJIJ01000021    ODN05535.1    LNIX01000004    OXA55859.1    UFQS01000671    UFQT01000671    SSX06005.1    SSX26362.1    AFYH01022985    AFYH01022986    AFYH01022987    GL451797    EFN78548.1    GANO01003111    JAB56760.1    GGFL01004533    MBW68711.1    GGFK01009390    MBW42711.1    GAMD01002732    JAA98858.1    GAKP01000290    JAC58662.1    GAKP01000289    JAC58663.1    GBYB01006208    JAG75975.1    GEZM01038723    JAV81543.1    GGFJ01008870    MBW58011.1    JRES01000503    KNC30546.1    GAKP01000291    JAC58661.1    GGFL01004534    MBW68712.1    AMQN01000089    DS232246    EDS38338.1    GFDL01008208    JAV26837.1    KQ414661    KOC65534.1    GDHF01027900    JAI24414.1    CH477250    EAT46086.1    GDHF01005538    JAI46776.1    DQ440337    ABF18370.1    JXUM01033244    KQ560982    KXJ80141.1    ATLV01017821    KE525194    KFB42497.1    GEZM01038724    JAV81542.1    AAAB01008799    EAA03810.5    APCN01001980    AAGJ04138504    APGK01029461    BT127696    KB740735    AEE62658.1    ENN79138.1    GDIQ01021155    JAN73582.1    GDIP01207446    JAJ15956.1    GL732621    EFX70395.1    MCFN01000151    OXB63626.1    PYGN01002094    PSN31522.1    PBC31641.1    BDGG01000005    GAU99750.1    GDIQ01077968    JAN16769.1    GGFJ01008940    MBW58081.1    KB632136    ERL89052.1    AXCN02001209    JH431954    NEDP02005530    OWF39364.1    CVRI01000047    CRK98304.1    GBXI01016984    JAC97307.1    GFXV01007557    MBW19362.1    KQ971372    KYB25431.1   
Pfam
PF01243   Putative_PNPOx        + More
PF10590   PNP_phzG_C
PF05856   ARPC4
Interpro
IPR019576   Pyridoxamine_oxidase_dimer_C        + More
IPR012349   Split_barrel_FMN-bd       
IPR000659   Pyridox_Oxase       
IPR011576   Pyridox_Oxase_put       
IPR019740   Pyridox_Oxase_CS       
IPR008384   ARPC4       
IPR034666   ARPC2/4       
SUPFAM
SSF69645   SSF69645       
Gene 3D
PDB
1NRG     E-value=3.33425e-61,     Score=593

Ontologies

Topology

Length:
233
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0007
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.04016
outside
1  -  233
 
 

Population Genetic Test Statistics

Pi
196.981126
Theta
189.017788
Tajima's D
0.178223
CLR
0.040495
CSRT
0.422928853557322
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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