Gene

KWMTBOMO04426  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005391

Annotation

pyridoxine_5'-phosphate_oxidase_[Bombyx_mori]

Location

Bomo_Chr8(-):6457510-6459323      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.95

CDS

ATGAGTATTGATATTGGTGGTATGAGAATTAAGTATAAAGAAAAAGATGAAACCTTTTTAGAGAAACACCTTGTATCTAAAGAACCTTTTGGACAATTCAAATCTTGGTTTGAAGAAGCTTGTGCTAGGAAAGAAATTCTGGAGCCCAATGCAATGTGTCTAGCTACAGTTTCACAGGAAGGTTTTCCATCAGCTCGGTTTGTTTTGTGCAAGGGTTATGGTAAAGAAGGATTCAAATTTTACACAAACTATGGAAGTAAAAAGGCTAAAGATATAGAAGGGAATCCTAACGTTGCTGCCACATTTTATTGGGAAATACTGAATAGATCAGTGAGAATTGAGGGCAGAGTAGAAAAACTTTCAGAAGATGATTCTACAAAATATTTTCATACACGACCAGTAGTCAGCCAGATTGCTGCATGTGCAAGCTACCAAAGTACTCCAATAGAGTCCAGAGATGTTCTGTGTGAAAGAGAAAAGCTTCTTGAACAGCAATATATGATACCTGGTAAAGAAGTTCCGAAACCAAGCTACTGGGGAGGATATCTCTTAATTCCAAGGTCTGTCGAATTCTGGCAAGGTCAGAGGGACCGGCTTCATGATCGCATCAAATTCAGAAGACCCAATAAAGGAGAAGTGTCTGATGAAAGATTATTACATGAAGGTGAAGATGGGTGGGTTTTTGAGCGACTTTCACCATAG

Protein

MSIDIGGMRIKYKEKDETFLEKHLVSKEPFGQFKSWFEEACARKEILEPNAMCLATVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQQYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRPNKGEVSDERLLHEGEDGWVFERLSP

Uniprot

Q1PCB0   A0A2A4J026   A0A194RCQ5   A0A2H1WU83   I4DKY9   A0A194PXE1   + More
S4PS64   A0A0L7LJZ2   A0A212EHZ8   H9JTS2   A0A232FAI2   A0A026W5Y4   A0A3R7PCX9   A0A1B6J6U3   A0A195B4Q7   A0A0M8ZT79   A0A158NQ60   A0A151IZZ7   A0A2J7PGW7   A0A195FNP1   A0A0P4VZY2   E2AIC3   A0A2A3EK58   A0A2G8JPJ8   F4WMQ6   A0A1B6MF52   A0A0P4W5N0   E0VFZ8   A0A0C9RCS1   A0A1B6BY41   A0A088A8V8   A0A2P2I342   C3YBZ9   A0A1D2M0K6   A0A212EHZ5   A0A154P5Q6   A0A1D2NK98   A0A226EEP0   A0A336M7R7   H3AEB3   E2C0I9   A0A182NZE8   U5EHA4   A0A2M4CU56   A0A182FSY6   A0A2M4APJ2   T1E7V1   A0A034WWD2   A0A034WY02   A0A0C9PXI5   A0A1Y1M739   A0A2M4BYL7   A0A0L0CE76   A0A034WSX9   A0A2M4CTN6   X1Z5D6   B0X0U6   A0A1Q3FH08   A0A0L7R3X9   A0A0K8UCQ1   Q17HC0   A0A0K8W6N7   Q1HQV7   A0A182HCG5   A0A084VX03   A0A1Y1M6Z0   A0A182X375   A0A182VJ56   Q7QK95   A0A182HZI6   W4Y0A9   J3JWS8   A0A182LQI5   A0A0P6IIY3   A0A0P5A7D0   A0A182NMR5   A0A1S3KHA6   E9HCR8   A0A2C9KS55   A0A226N7P4   A0A182JD03   A0A2C9KS20   A0A2P8XHQ6   A0A2A3EKU1   A0A182T0Q7   A0A1D1VFP1   A0A0P6DFV2   A0A2M4BYT9   U4U7K8   A0A182Q9T7   T1J8D0   A0A210PSD1   S4RPV4   A0A1J1IDL2   A0A1A9W1M4   A0A182VRY4   A0A0A1WG02   A0A2H8U0M8   A0A139WC72   A0A182Y4N5  

Pubmed

19121390    26354079    22651552    23622113    26227816    22118469    + More
28648823    24508170    30249741    21347285    20798317    29023486    21719571    20566863    18563158    27289101    9215903    25348373    28004739    26108605    23254933    17510324    17204158    26483478    24438588    12364791    14747013    17210077    22516182    23537049    20966253    26383154    21292972    15562597    29403074    27649274    28812685    25830018    18362917    19820115    25244985   

EMBL

BABH01013608    DQ452398    ABE28379.1    NWSH01004148    PCG65425.1    KQ460397    + More
KPJ15254.1    ODYU01011099    SOQ56625.1    AK401957    BAM18579.1    KQ459589    KPI97688.1    GAIX01014123    JAA78437.1    JTDY01000856    KOB75659.1    AGBW02014758    OWR41109.1    BABH01003437    BABH01003438    NNAY01000601    OXU27448.1    KK107455    QOIP01000010    EZA50449.1    RLU17344.1    QCYY01002868    ROT66995.1    GECU01012817    JAS94889.1    KQ976618    KYM79252.1    KQ435855    KOX70645.1    ADTU01022976    KQ980658    KYN14759.1    NEVH01025161    PNF15571.1    KQ981382    KYN42170.1    GDRN01099300    JAI58795.1    GL439754    EFN66834.1    KZ288230    PBC31642.1    MRZV01001469    PIK37677.1    GL888218    EGI64533.1    GEBQ01005417    JAT34560.1    GDRN01099303    GDRN01099298    GDRN01099297    JAI58794.1    DS235129    EEB12304.1    GBYB01001345    GBYB01001346    GBYB01004701    GBYB01012013    JAG71112.1    JAG71113.1    JAG74468.1    JAG81780.1    GEDC01031423    GEDC01003743    JAS05875.1    JAS33555.1    IACF01002803    LAB68442.1    GG666499    EEN62174.1    LJIJ01008633    ODM75294.1    OWR41108.1    KQ434822    KZC07183.1    LJIJ01000021    ODN05535.1    LNIX01000004    OXA55859.1    UFQS01000671    UFQT01000671    SSX06005.1    SSX26362.1    AFYH01022985    AFYH01022986    AFYH01022987    GL451797    EFN78548.1    GANO01003111    JAB56760.1    GGFL01004533    MBW68711.1    GGFK01009390    MBW42711.1    GAMD01002732    JAA98858.1    GAKP01000290    JAC58662.1    GAKP01000289    JAC58663.1    GBYB01006208    JAG75975.1    GEZM01038723    JAV81543.1    GGFJ01008870    MBW58011.1    JRES01000503    KNC30546.1    GAKP01000291    JAC58661.1    GGFL01004534    MBW68712.1    AMQN01000089    DS232246    EDS38338.1    GFDL01008208    JAV26837.1    KQ414661    KOC65534.1    GDHF01027900    JAI24414.1    CH477250    EAT46086.1    GDHF01005538    JAI46776.1    DQ440337    ABF18370.1    JXUM01033244    KQ560982    KXJ80141.1    ATLV01017821    KE525194    KFB42497.1    GEZM01038724    JAV81542.1    AAAB01008799    EAA03810.5    APCN01001980    AAGJ04138504    APGK01029461    BT127696    KB740735    AEE62658.1    ENN79138.1    GDIQ01021155    JAN73582.1    GDIP01207446    JAJ15956.1    GL732621    EFX70395.1    MCFN01000151    OXB63626.1    PYGN01002094    PSN31522.1    PBC31641.1    BDGG01000005    GAU99750.1    GDIQ01077968    JAN16769.1    GGFJ01008940    MBW58081.1    KB632136    ERL89052.1    AXCN02001209    JH431954    NEDP02005530    OWF39364.1    CVRI01000047    CRK98304.1    GBXI01016984    JAC97307.1    GFXV01007557    MBW19362.1    KQ971372    KYB25431.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000215335    UP000053097    UP000279307    UP000283509    UP000078540    UP000053105    UP000005205    UP000078492    UP000235965    UP000078541    UP000000311    UP000242457    UP000230750    UP000007755    UP000009046    UP000005203    UP000001554    UP000094527    UP000076502    UP000198287    UP000008672    UP000008237    UP000075885    UP000069272    UP000037069    UP000002320    UP000053825    UP000008820    UP000069940    UP000249989    UP000030765    UP000076407    UP000075903    UP000007062    UP000075840    UP000007110    UP000019118    UP000075882    UP000075884    UP000085678    UP000000305    UP000076420    UP000198323    UP000075880    UP000245037    UP000075901    UP000186922    UP000030742    UP000075886    UP000242188    UP000245300    UP000183832    UP000091820    UP000075920    UP000007266    UP000076408   

PRIDE

Q1PCB0    H9JTS2   

Pfam

PF01243   Putative_PNPOx        + More
PF10590   PNP_phzG_C
PF05856   ARPC4

Interpro

IPR019576   Pyridoxamine_oxidase_dimer_C        + More
IPR012349   Split_barrel_FMN-bd       
IPR000659   Pyridox_Oxase       
IPR011576   Pyridox_Oxase_put       
IPR019740   Pyridox_Oxase_CS       
IPR008384   ARPC4       
IPR034666   ARPC2/4       

SUPFAM

SSF69645   SSF69645       

Gene 3D

2.30.110.10     3.30.1460.20    

ProteinModelPortal

Q1PCB0   A0A2A4J026   A0A194RCQ5   A0A2H1WU83   I4DKY9   A0A194PXE1   + More
S4PS64   A0A0L7LJZ2   A0A212EHZ8   H9JTS2   A0A232FAI2   A0A026W5Y4   A0A3R7PCX9   A0A1B6J6U3   A0A195B4Q7   A0A0M8ZT79   A0A158NQ60   A0A151IZZ7   A0A2J7PGW7   A0A195FNP1   A0A0P4VZY2   E2AIC3   A0A2A3EK58   A0A2G8JPJ8   F4WMQ6   A0A1B6MF52   A0A0P4W5N0   E0VFZ8   A0A0C9RCS1   A0A1B6BY41   A0A088A8V8   A0A2P2I342   C3YBZ9   A0A1D2M0K6   A0A212EHZ5   A0A154P5Q6   A0A1D2NK98   A0A226EEP0   A0A336M7R7   H3AEB3   E2C0I9   A0A182NZE8   U5EHA4   A0A2M4CU56   A0A182FSY6   A0A2M4APJ2   T1E7V1   A0A034WWD2   A0A034WY02   A0A0C9PXI5   A0A1Y1M739   A0A2M4BYL7   A0A0L0CE76   A0A034WSX9   A0A2M4CTN6   X1Z5D6   B0X0U6   A0A1Q3FH08   A0A0L7R3X9   A0A0K8UCQ1   Q17HC0   A0A0K8W6N7   Q1HQV7   A0A182HCG5   A0A084VX03   A0A1Y1M6Z0   A0A182X375   A0A182VJ56   Q7QK95   A0A182HZI6   W4Y0A9   J3JWS8   A0A182LQI5   A0A0P6IIY3   A0A0P5A7D0   A0A182NMR5   A0A1S3KHA6   E9HCR8   A0A2C9KS55   A0A226N7P4   A0A182JD03   A0A2C9KS20   A0A2P8XHQ6   A0A2A3EKU1   A0A182T0Q7   A0A1D1VFP1   A0A0P6DFV2   A0A2M4BYT9   U4U7K8   A0A182Q9T7   T1J8D0   A0A210PSD1   S4RPV4   A0A1J1IDL2   A0A1A9W1M4   A0A182VRY4   A0A0A1WG02   A0A2H8U0M8   A0A139WC72   A0A182Y4N5  

PDB

1NRG     E-value=3.33425e-61,     Score=593

KEGG

693010    K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] | (RefSeq) Pnpo; pyridoxine 5'-phosphate oxida

PATHWAY

00750    Vitamin B6 metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0010181   GO:0004733   GO:0008615   GO:0005885   GO:0034314   GO:0030041   GO:0016021   GO:0042823   GO:0016491   GO:0016638   GO:0004674   GO:0009058   GO:0016742   GO:0003824   GO:0055114   GO:0048037  

PANTHER

PTHR10851  

Length:

233

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0007

Exp number, first 60 AAs:

0.0001

Total prob of N-in:

0.04016

outside

1  -  233

 

 

Pi

196.981126

Theta

189.017788

Tajima's D

0.178223

CLR

0.040495

CSRT

0.422928853557322

Interpretation

Uncertain