SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04408
Annotation
PREDICTED:_uncharacterized_protein_LOC101741884_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.756 Nuclear   Reliability : 1.712
 

Sequence

CDS
ATGGGTGCTGCCTGCTATGAAGTCTGGAAAACCATAGTGAAGAAAGTGGGGGGTTCTCCAAATTGTTGGAGAGATGTTGGCCATTTATTAGGTGTTACACAGGATGACCTAAATTACATAATGAATTCTTTAAAAGATGACCCAGTGGATATGGTATTGAAAGTATTCAGACAAAATGAAAAAGCTACTATAAATAAAATAGTTGATGCATTCATAAAACTGCAGAGGTATGACATCTTGTTAGCAATTGAAAATCCACTGTGTACTATGGCTGAATATTTTAATAAAGATGATAGTGGTTATCAAAGTGATGGTAAGATAACTGGTAAAAAGGAAATTGTTACACTCAAAAACCTACCCAATGATCTACCTGCAGCTTTAAATAAAAATATAGTACTTCAAAACAATGACCCTAAAAGACCTAAAGAAACGTTACAGCCCCCAGTTAGTAAACAGGAGCCAGCAGAAAAAGAAAGCCCTATTTTATTCTTAACTTATGCTCAAGATGGTCTACCAACTGCACTTAACATACAGGAGTATGTTAGTAATTGGACGGAAATACCAAATGTTAAAGTCATAACATTAAACAATAGAAGAGAAGAAACTTACCAGAATCCTGAAAAATTTATAAGAGAATATTTTGAAAAGGCTGACTACATTGTGCCAATCATAACAACAGGATATATAAATGAAATAACCTCAAACAACAAAAATATACCAAATACAACAGAGAATTTGGATCACAAATATGTTAATTTCATATATAATCTCATTGTTAACAATTATATTCATGCAACTGGTTGTCTTAACAGAAAAGTAAGAAGTGTGCTGCCACAGAATGCAAATGTTGATCTATTTTCACGTATGACAATGTATCCTGATTTATTGCCTTGGACATACGAGACAAACTTTGATGAACAGTTTCAAGAGTTTTTGAGAAAAGAACCTTGA
Protein
MGAACYEVWKTIVKKVGGSPNCWRDVGHLLGVTQDDLNYIMNSLKDDPVDMVLKVFRQNEKATINKIVDAFIKLQRYDILLAIENPLCTMAEYFNKDDSGYQSDGKITGKKEIVTLKNLPNDLPAALNKNIVLQNNDPKRPKETLQPPVSKQEPAEKESPILFLTYAQDGLPTALNIQEYVSNWTEIPNVKVITLNNRREETYQNPEKFIREYFEKADYIVPIITTGYINEITSNNKNIPNTTENLDHKYVNFIYNLIVNNYIHATGCLNRKVRSVLPQNANVDLFSRMTMYPDLLPWTYETNFDEQFQEFLRKEP

Summary

EMBL
ODYU01006288    SOQ48004.1    NWSH01005955    PCG63807.1    JQ687409    AFK24444.1    + More
PCG63804.1    JTDY01003776    KOB69022.1    AGBW02014758    OWR41094.1    GDQN01003263    JAT87791.1    KQ459761    KPJ20132.1    KQ459589    KPI97676.1    NWSH01008053    PCG62712.1    GAIX01009193    JAA83367.1    GBYB01005343    GBYB01009719    GBYB01009722    JAG75110.1    JAG79486.1    JAG79489.1    KQ981768    KYN35840.1    KK107020    EZA62509.1    KQ979900    KYN18653.1    KQ976973    KYN06717.1    KQ982510    KYQ55636.1    QOIP01000006    RLU21378.1    KK852508    KDR22395.1    KQ976698    KYM77479.1    GECL01003585    JAP02539.1    ADTU01015577    GDKW01000036    JAI56559.1    ACPB03011671    GL764255    EFZ18078.1    GBGD01001800    JAC87089.1    KZ288185    PBC34903.1    GEMB01004232    JAR99037.1    GBBI01004931    JAC13781.1    GEMB01000096    JAS03015.1    NEVH01026101    PNF14700.1    JF965014    AEJ08192.1    KQ434803    KZC05935.1    GFTR01005697    JAW10729.1    KQ414688    KOC63641.1    GEDC01029549    JAS07749.1    GDHC01001719    JAQ16910.1    GDHC01017747    JAQ00882.1    GBRD01015650    JAG50176.1    GEDC01007344    JAS29954.1    KQ435821    KOX72337.1    NNAY01000011    OXU32039.1    GDIP01099306    LRGB01002672    JAM04409.1    KZS06601.1    GDIQ01062817    JAN31920.1    GDIP01021177    JAM82538.1    GL732540    EFX82465.1    GDIQ01257618    JAJ94106.1    GDIQ01133899    JAL17827.1    GEBQ01003770    JAT36207.1    GDIP01057102    JAM46613.1    GECZ01000016    JAS69753.1    GECU01027660    JAS80046.1   
Pfam
PF00531   Death        + More
PF09754   PAC2
Interpro
IPR011029   DEATH-like_dom_sf        + More
IPR000488   Death_domain       
IPR038389   PSMG2_sf       
IPR019151   Proteasome_assmbl_chaperone_2       
IPR016562   Proteasome_assmbl_chp_2_euk       
IPR017281   Myelin_different_resp_MyD88       
SUPFAM
SSF47986   SSF47986       
Gene 3D

Ontologies

Topology

Length:
316
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01574
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04266
outside
1  -  316
 
 

Population Genetic Test Statistics

Pi
53.396864
Theta
156.386847
Tajima's D
-0.746254
CLR
104.215181
CSRT
0.189940502974851
Interpretation
Uncertain
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