Gene

KWMTBOMO04401

Annotation

PREDICTED:_uncharacterized_protein_LOC105841331_[Bombyx_mori]

Location

Bomo_Chr8(-):5952519-5955921      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.006

CDS

ATGTCTAAAGCCGAACAGGAATGTGAGGATTTTTATGATTTAAATACATACCGCGATAACACAACTGGACGTTACGTCACCGCTTTGCCTTTCTTGAGGTCGCCTACCGCTCTGGGCGATTCTCTTACAACCGCACGTCGCTGTCTGTCGTCACTCGAACGCAGATTTAAGACAAATATCGCTTTAAAAACTGATTACGATGCCGCGATGAGAGATTATCTCGAACGGAACATCATTTCACCCGCACCCGCTCTTACTGATACGAATTATTACGTCATCCCTCACCACGGCATAAGCCGAGAAGACAAACCGCTCCGCATTGTACTGAACGCAACTGCACGATGCATAGATACAAACGTTTCATTGAACGATTGTTTACATTCCGGTCCTAATTTGCAAGCAGACCTAACCGCGATTATTTTAAAATTCAGACTGTTTCCGATTGCTTTAACCGCCGACATCAAACAAATGTTTTTGGCTATAGGCATTCGTGAGGAAGACCGCCGCTTTTTGAATATATTATACAAATTTGACAAAGATGATAACGCGAAAATGTATCATTTTAATCGCGTTTGTTTTGGTCTACGGTGCTCGCCGTACCTTGCTATGAAGACAGTCAAGCGTCTCGCCCGCGATGAAACTGATTTCCCGATCGCTTCAGAAATCGCTAGTGATCATCTTTATATGGATGATCTAGGAGTTTCGGTAGATACGCCCGAGAATGGAATTCAGTTGGCTCATGATTTAATCGAACTATTCAAACGTGGTGGTTTCGACTTAGTTAAATTCGTTAGCAATTCGCCCGAGGTGTTAAAATCGATTCCGCAAGCCAACCGCTTATCTTCAAAAATTGAATTCGACAAAGAGGATAATATGAAGCTCCTAGGTCTAATTTGGTCACCGGTCGAGGATGAATTTTCAATCGCTATTAAATTCAACCCGCAAGCAAAATGTACAAAGCGCCTTATGCTTTCCACAATCGCTAAACTGTGGGACATAAACGGATTTTGTGCCCCTGTCATTTTACACGCAAAATTGTTAATAAAAGCTCTCTGGGTAGCTCAGATTGATTGGGATGCAGAGCCCCCAAGCGACATCTGTGCTGCATGGAAACGCTTTCTTAGTGAACTCCCCGCTCTGCAAGACTTTAAAATACCTCGCTTCGTAGGTATCGTGCCCGAGTCCCGTGTCATACTACTGGGATTTGCGGACGCTTCTGAAAAAGCGATGGGTGCTTCTGTGTATATTTGTGTACAACCAGCTTCCGGACCAAATGAAGTCAATTTAATTGGTGCCAAAAGCAAGGTCGCGCCGCTCAAGGTTATTTCCTTAGCCCGCCTAGAGCTTTGTGCTGCTGTATTATTATCGAAACTGTTTCGATTTGTTATCGACACTGTTTCTCCCCGCTGTCATGTCGACGAAATTTTCGCGTTTACTGATTCGACAGTGACCCTCCATTGGGTTCACTCGTCTCCGCATCGCTTTGATACTTTCATTGCGAACCGCATCGCACAAATACAGAACAACCTTGACCCCAAACACTTCTACCATTGTGAAGGTACGCAGAATCCCAGCGACTGCTTGAGTCGTGGTCTCACACCCGCTCAATTATTGAATCACCCGCTGTGGCTCCATGGCCCCACATGGGCTCGTGATGACGTCCATACATGGCCCATCAACCGCTTCACGTTTGATCCCGCACAAGATGAAAAGATATTAGAGCTCAAAAAACAATCAAATGTCTTCATCACTACAGATGAGACAGAACCCTTTCTCTGTACGCTGGCCAAGCGCGTCTCTTCTTGAAAACTCACCGCCTTTACAATGGCCAATGGGCATAATTGA

Protein

MSKAEQECEDFYDLNTYRDNTTGRYVTALPFLRSPTALGDSLTTARRCLSSLERRFKTNIALKTDYDAAMRDYLERNIISPAPALTDTNYYVIPHHGISREDKPLRIVLNATARCIDTNVSLNDCLHSGPNLQADLTAIILKFRLFPIALTADIKQMFLAIGIREEDRRFLNILYKFDKDDNAKMYHFNRVCFGLRCSPYLAMKTVKRLARDETDFPIASEIASDHLYMDDLGVSVDTPENGIQLAHDLIELFKRGGFDLVKFVSNSPEVLKSIPQANRLSSKIEFDKEDNMKLLGLIWSPVEDEFSIAIKFNPQAKCTKRLMLSTIAKLWDINGFCAPVILHAKLLIKALWVAQIDWDAEPPSDICAAWKRFLSELPALQDFKIPRFVGIVPESRVILLGFADASEKAMGASVYICVQPASGPNEVNLIGAKSKVAPLKVISLARLELCAAVLLSKLFRFVIDTVSPRCHVDEIFAFTDSTVTLHWVHSSPHRFDTFIANRIAQIQNNLDPKHFYHCEGTQNPSDCLSRGLTPAQLLNHPLWLHGPTWARDDVHTWPINRFTFDPAQDEKILELKKQSNVFITTDETEPFLCTLAKRVSSXKLTAFTMANGHN

Uniprot

S4NIN9   A0A0A9W266   A0A0A9VTB0   A0A0A9VUS3   A0A1S3DIZ2   A0A023F096   + More
A0A1S4EIX5   A0A1Y1LIC8   A0A1S3DJJ0   A0A1S3DJ34   A0A1S3DJC0   A0A1S3DMT1   A0A1S3DMK8   A0A1S3DM22   V5GHM7   A0A3Q0JFQ3   A0A3Q0J7N1   A0A3Q0J7K9   A0A3Q0JJJ7   A0A3Q0J0P0   A0A146M0N4   A0A1S3DHM0   A0A1S3DTS8   A0A1Y1KMX0   A0A3Q0JCL2   A0A1S3DH93   A0A1B6LLT3   A0A3Q0IQQ3   A0A1B6MT91   A0A1S3CUQ4   A0A1B6KIX6   A0A0J7K7U0   A0A1B6GGX5   J9JVD6   A0A2S2PM34   A0A0J7K7L1   A0A1Y1LM33   J9KD60   A0A0A9W8L8   A0A0J7KB34   X1WY64   A0A146LBU6   A0A1Y1LIG5   A0A0J7N5Z0   X1WZY4   J9JUM9   W8AH72   A0A3Q0JBZ9   A0A1S3DBQ3   A0A1B6MUZ9   A0A1S3DBK1   A0A1B6KZV2   A0A0J7N890   A0A2S2NCY5   A0A0A9YQQ8   V5GC07   A0A0J7N465   X1XU26   X1XU06   A0A0A9WWW3   A0A0A9WHD6   J9JNP4   A0A2S2N9D0   A0A0J7KGQ6   A0A146KRI6   X1WRA3   A0A0J7N2B8   A0A2S2QPS5   A0A0J7KD57   A0A0J7K9I5   A0A0J7K952   A0A0J7KDN6   A0A0J7N314   W8BU98   A0A3S2TB02   A0A1S3DMN9   A0A0A9WAJ3   X1XTX7   A0A0J7KCI2   A0A0J7K9A7   A0A0J7KNK6   A0A2S2NNC8   A0A0J7KCR4   A0A182MIR3   J9JLG6   A0A0J7KBS8   A0A0A9VSF7   A0A1B6MFR0   A0A0A9X8U7   A0A0A9VYL4   A0A0J7N189   A0A1Y1LBZ3   A0A1S3DMW8   A0A146KZL4   A0A182HA33   A0A2M4CW28   A0A0A9WE49   A0A0A9Z0W7   A0A1U8N891   A0A224XG39  

Pubmed

23622113    25401762    25474469    28004739    26823975    24495485    + More
26483478    25893780   

EMBL

GAIX01013989    JAA78571.1    GBHO01044644    JAF98959.1    GBHO01044645    JAF98958.1    + More
GBHO01044643    JAF98960.1    GBBI01004276    JAC14436.1    GEZM01054789    JAV73399.1    GALX01004947    JAB63519.1    GDHC01006469    JAQ12160.1    GEZM01085145    GEZM01085143    JAV60187.1    GEBQ01015458    JAT24519.1    GEBQ01000825    JAT39152.1    GEBQ01028569    JAT11408.1    LBMM01012238    KMQ86334.1    GECZ01008071    JAS61698.1    ABLF02008594    GGMR01017890    MBY30509.1    LBMM01012188    KMQ86362.1    GEZM01054766    GEZM01054765    JAV73410.1    ABLF02041863    GBHO01039838    GBHO01006034    JAG03766.1    JAG37570.1    LBMM01010405    KMQ87487.1    ABLF02012239    ABLF02012241    ABLF02017372    ABLF02042178    ABLF02066436    GDHC01014057    JAQ04572.1    JAV73413.1    LBMM01009496    KMQ88090.1    ABLF02036131    ABLF02041527    ABLF02064049    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GAMC01021577    GAMC01021573    JAB84982.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    LBMM01008464    KMQ88855.1    GGMR01002421    MBY15040.1    GBHO01009080    JAG34524.1    GALX01000776    JAB67690.1    LBMM01010417    KMQ87475.1    ABLF02001506    ABLF02008029    ABLF02035899    ABLF02037719    ABLF02046327    ABLF02064627    ABLF02025958    GBHO01034255    GBHO01034254    JAG09349.1    JAG09350.1    GBHO01037676    JAG05928.1    ABLF02005684    GGMR01000737    MBY13356.1    LBMM01007770    KMQ89434.1    GDHC01019528    JAP99100.1    ABLF02066034    LBMM01011492    KMQ86800.1    GGMS01010524    MBY79727.1    LBMM01009442    KMQ88136.1    LBMM01011244    KMQ86944.1    LBMM01011245    KMQ86943.1    LBMM01009202    KMQ88311.1    LBMM01011051    KMQ87060.1    GAMC01009674    JAB96881.1    RSAL01001808    RVE40681.1    GBHO01038800    JAG04804.1    ABLF02006304    ABLF02036268    LBMM01009688    KMQ87939.1    LBMM01011283    KMQ86917.1    LBMM01005079    KMQ91831.1    GGMR01005823    MBY18442.1    LBMM01009551    KMQ88039.1    AXCM01013330    ABLF02030698    ABLF02030705    ABLF02030709    LBMM01009888    KMQ87813.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    GEBQ01005223    JAT34754.1    GBHO01028371    GBHO01028370    JAG15233.1    JAG15234.1    GBHO01044316    JAF99287.1    LBMM01012077    KMQ86420.1    GEZM01060254    JAV71154.1    GDHC01018192    JAQ00437.1    JXUM01030959    KQ560903    KXJ80414.1    GGFL01005358    MBW69536.1    GBHO01038805    GBHO01038804    GBHO01038801    JAG04799.1    JAG04800.1    JAG04803.1    GBHO01005525    JAG38079.1    GFTR01008874    JAW07552.1   

Proteomes

UP000079169    UP000036403    UP000007819    UP000283053    UP000075883    UP000069940    + More
UP000249989    UP000189702   

Pfam

PF17921   Integrase_H2C2        + More
PF05380   Peptidase_A17
PF18701   DUF5641
PF00665   rve
PF00078   RVT_1
PF05585   DUF1758
PF03564   DUF1759

Interpro

IPR041588   Integrase_H2C2        + More
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR001584   Integrase_cat-core       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR021109   Peptidase_aspartic_dom_sf       
IPR005312   DUF1759       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR000727   T_SNARE_dom       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

S4NIN9   A0A0A9W266   A0A0A9VTB0   A0A0A9VUS3   A0A1S3DIZ2   A0A023F096   + More
A0A1S4EIX5   A0A1Y1LIC8   A0A1S3DJJ0   A0A1S3DJ34   A0A1S3DJC0   A0A1S3DMT1   A0A1S3DMK8   A0A1S3DM22   V5GHM7   A0A3Q0JFQ3   A0A3Q0J7N1   A0A3Q0J7K9   A0A3Q0JJJ7   A0A3Q0J0P0   A0A146M0N4   A0A1S3DHM0   A0A1S3DTS8   A0A1Y1KMX0   A0A3Q0JCL2   A0A1S3DH93   A0A1B6LLT3   A0A3Q0IQQ3   A0A1B6MT91   A0A1S3CUQ4   A0A1B6KIX6   A0A0J7K7U0   A0A1B6GGX5   J9JVD6   A0A2S2PM34   A0A0J7K7L1   A0A1Y1LM33   J9KD60   A0A0A9W8L8   A0A0J7KB34   X1WY64   A0A146LBU6   A0A1Y1LIG5   A0A0J7N5Z0   X1WZY4   J9JUM9   W8AH72   A0A3Q0JBZ9   A0A1S3DBQ3   A0A1B6MUZ9   A0A1S3DBK1   A0A1B6KZV2   A0A0J7N890   A0A2S2NCY5   A0A0A9YQQ8   V5GC07   A0A0J7N465   X1XU26   X1XU06   A0A0A9WWW3   A0A0A9WHD6   J9JNP4   A0A2S2N9D0   A0A0J7KGQ6   A0A146KRI6   X1WRA3   A0A0J7N2B8   A0A2S2QPS5   A0A0J7KD57   A0A0J7K9I5   A0A0J7K952   A0A0J7KDN6   A0A0J7N314   W8BU98   A0A3S2TB02   A0A1S3DMN9   A0A0A9WAJ3   X1XTX7   A0A0J7KCI2   A0A0J7K9A7   A0A0J7KNK6   A0A2S2NNC8   A0A0J7KCR4   A0A182MIR3   J9JLG6   A0A0J7KBS8   A0A0A9VSF7   A0A1B6MFR0   A0A0A9X8U7   A0A0A9VYL4   A0A0J7N189   A0A1Y1LBZ3   A0A1S3DMW8   A0A146KZL4   A0A182HA33   A0A2M4CW28   A0A0A9WE49   A0A0A9Z0W7   A0A1U8N891   A0A224XG39  

KEGG

105841331    no KO assigned | (RefSeq) uncharacterized LOC105841331

GO

GO:0015074   GO:0003676   GO:0008270   GO:0016021   GO:0004190  

Length:

614

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10405

Exp number, first 60 AAs:

0.0147

Total prob of N-in:

0.00556

outside

1  -  614

 

 

Pi

157.489785

Theta

17.660038

Tajima's D

-0.857909

CLR

234.457341

CSRT

0.169341532923354

Interpretation

Uncertain