SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04400  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005282
Annotation
spliceosomal_protein_on_the_X_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.472
 

Sequence

CDS
ATGGCAGCGGGGCCTATTGCTGAAAGAAATCAAGATGCAACGATTTACGTTGGCGGTCTCGATGACAGGGTAACTGAGAGTTTGTTATGGGAGCTCTTCGTGCAGTCGGGGCCAGTAGTAAATGTTCACATGCCCAAAGATAGAGTGACTCAGACACATCAGGGCTATGGATTTGTTGAATTTATGGGTGAAGAAGATGCTGACTATGCAATAAAGGTCATGAACATGATAAAACTATATGGAAAGCCTGTAAGAGTGAACAAAGCATCAGCACATCAGAAGAACTTGGATGTGGGAGCAAATGTGTTCATTGGAAACTTAGATCCTGAAGTAGATGAAAAGTTATTATATGACACATTCTCTGCATTTGGAGTTATATTACAGACACCTAAGGTAATGAGAGATCCTGAAACAGGAAATTCAAAAGCTTTTGCTTTTATTAACTTTGCATCATTTGAAGCCTCGGATGCAGCAATTGAAGCAATGAATAACCAGTATCTATGTAACAGGCCAATATCAGTTTCATATGCATTTAAGAAGGATGTGAAAGGGGAGAGGCACGGATCAGCAGCAGAGAGATTACTTGCTGCACAAAATCCACTATCGCATGCGGACAGACCTCACCAGTTGTTTGCCGATGCACCACCTACGTTGATGGGGCCTGTGCTAATGGCACCACCGCCGCCGCCCACACCATCCCCGATGCCACCACAAGGACCTCCAATGAATGCGCGACCACCACCACCATTGCCTATGTCAGCGCCGCCGCCACCGCCATCTTCGATGCCTCCTCCCGGTCCACCACCGCCTCCAGGCCCTCCACCACCACCTCCACCATTCCATCATTTCCCGCCTCCGCCATTCGGTCCGCCAGGGTTTGGACCACCACCCCCACCTGGTGCTCGTCCTCCACCACCATGGAGACCACCGCCTCCATCATTCAGGCCGCAGTTCCCTCCTCGTGGGCCTCCGCCGTTTGGGCATCCCCCGTTTCCGCCGCATCCACCTGAACCAAACTATAATTATTGA
Protein
MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGERHGSAAERLLAAQNPLSHADRPHQLFADAPPTLMGPVLMAPPPPPTPSPMPPQGPPMNARPPPPLPMSAPPPPPSSMPPPGPPPPPGPPPPPPPFHHFPPPPFGPPGFGPPPPPGARPPPPWRPPPPSFRPQFPPRGPPPFGHPPFPPHPPEPNYNY

Summary

Uniprot
ProteinModelPortal
PDB
6QX9     E-value=6.43856e-107,     Score=989

Ontologies

Topology

Length:
342
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00101
Exp number, first 60 AAs:
0.00039
Total prob of N-in:
0.01653
outside
1  -  342
 
 

Population Genetic Test Statistics

Pi
252.060298
Theta
197.118294
Tajima's D
1.18142
CLR
0.207461
CSRT
0.710364481775911
Interpretation
Uncertain
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