Gene

KWMTBOMO04397

Pre Gene Modal

BGIBMGA005239

Annotation

PREDICTED:_alpha-amylase_4N-like_[Papilio_polytes]

Location

Bomo_Chr8(-):5824435-5845721      View in EpiBrowser

Full name

Alpha-amylase       + More
Alpha-amylase 4N      

Location in the cell

Cytoplasmic   Reliability : 1.402 Extracellular   Reliability : 2.073

CDS

ATGCCTCAGTTGCGATTGCTTCTCGTGTGTTTAATCTTGGGTTTCGTGCTATGCAATCATCATAAAAGGACGAACCAAGATCTCAACCGGTCGACAATTGTGCATCTCTTCGAATGGAAATGGAAGGATATTGCTGATGAATGCGAGAGATTCCTTGCGCCGAAAGGCTTCGGTGGAGTTCAAGTATCTCCACCCTCGGAGAATGTTATCATTCGTTTATCAGACGGTACACGACCTTGGTATGAACGTTACCAAGTAATGTCCTACAAGTTGATCACCAGATCAGGAAATCAAGATGAATTTTTGAACATGACCCGAAGATGTAATGATGTTGGGATAAGAATTTACGCTGACGTGGTAATTAATCATATGACGAGTGACAATAGGGAATCTGTTGGTACAGGGGGTAGTACAGCCAACTATAAAGAGTACAGCTACCCCGCTGTGCCGTACACGAGAGACCACTTCCATCATCCGTCCTGCTCTATTAATAATTATAATGATGCTGCACAGGTAAGGGCCTGCGATTTGGTTGGATTGAAGGACTTGAATCACAACTTGCCGTATGTTCGTGACAAAATCGTTGAATACCTAAACAAGCTTATTGCATTAGGAGTTGCCGGATTCAGAGTGGATGCAGCAAAACATATGTGGCCACACGACCTCAAAGAGATGTACAATAGACTTAATAATCTCAATGTAGATTTTGGCTTCCTACCTAATACAAAACCGTACATTTACCAAGAAGTAATTTATAGAGGGAATGAGCCTATCCAACATACTGAATACACACCCTTTGGTGACGTCACAGAATTTCGGGTCGGATACGAGTTAAAACCAGTTTTTGAGGGTAAAAATCCATTGAAATGGTTGAAGTCCTGGGGCGAGAATTGGAACTTATCACCCAGTGACCGCGTTGTTGTATTCATTGACAATCACGACACGCAGAGGTCGAATGAAGTTTTGACGTACAAAAATGCCAAGTCTTATAAGGCAGCTATAGCGTTTACACTGGCACACCCATATGGCGAACCTCGCGTGATGAGCGGTTATTTCTTCGACAGAACCGACCAAGGTCCACCAAGCGACGGTAACGAGGAAATTTTATCTCCAATCATAAATGATGACGACACCTGCGGCAATGGCTGGGTTTGCGAGCATCGTTGGCGACAGATCTATCAAATGGTCGCATTTAGAAATGCCGTCCGAGATACTAGAGTTGAAAATTGGTGGGACAACGGTCTTAATCAGATAGCTTTCAGTCGAGGAAATAAAGGCTTTATCGCTATTAACGCCGAGGGTCGAGATTTGGATGTTATTTTACAGACTGGTCTTCCATCTGGTACTTATTGCGATGTTATAAGCGGGAAAATTCAAGGCCAAGAATGTTCCGGAAGAAAAATAACAGTTGGCAGTGATGGTCGTGCGCATATTTATGTATCCAAAGACGGGGAGGACATGCATCTTGCCACACATGTTGGGCCGGAGTCATTACTCCAGATCAAGCAGAAGATATGA

Protein

MPQLRLLLVCLILGFVLCNHHKRTNQDLNRSTIVHLFEWKWKDIADECERFLAPKGFGGVQVSPPSENVIIRLSDGTRPWYERYQVMSYKLITRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYTRDHFHHPSCSINNYNDAAQVRACDLVGLKDLNHNLPYVRDKIVEYLNKLIALGVAGFRVDAAKHMWPHDLKEMYNRLNNLNVDFGFLPNTKPYIYQEVIYRGNEPIQHTEYTPFGDVTEFRVGYELKPVFEGKNPLKWLKSWGENWNLSPSDRVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFDRTDQGPPSDGNEEILSPIINDDDTCGNGWVCEHRWRQIYQMVAFRNAVRDTRVENWWDNGLNQIAFSRGNKGFIAINAEGRDLDVILQTGLPSGTYCDVISGKIQGQECSGRKITVGSDGRAHIYVSKDGEDMHLATHVGPESLLQIKQKI

Catalytic Activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.

Cofactor

Ca(2+)
chloride

Subunit

Monomer.

Similarity

Belongs to the glycosyl hydrolase 13 family.

Keywords

Calcium   Carbohydrate metabolism   Chloride   Complete proteome   Disulfide bond   Glycosidase   Hydrolase   Metal-binding   Reference proteome   Signal  

Feature

chain  Alpha-amylase

Uniprot

H9J6U7   A0A3S2LDZ6   A0A0N0PEK4   A0A212FJR5   A0A1I8PGY5   A0A2H1VM91   + More
A0A212FLR1   A0A0L0CFJ8   A0A2H1X0X9   T1P7P3   A0A2H1WIR2   A0A3G5BII4   A0A1I8MTI4   H9IX93   A0A2A4IUB0   A0A1W4XRV5   A0A1L8EHU5   A0A212FJQ5   Q7YXJ3   A0A0K8W605   Q25590   A0A2A4JNE0   E5LCR9   A0A034VBJ8   Q7YXU5   F6K706   A0A194Q7A8   A0A0K8UF81   A0A034V839   A9XTK5   B1NLD4   A0A182Q521   W8BSY0   W8BYH3   A0A0K8V452   B8Y698   A0A3S2TT63   Q8I9Q2   A0A1B0GIQ4   C7EMF0   H9J6U8   A0A3G5ARJ9   A0A194Q160   A0A034VAD3   A0A1L2FPB8   Q8IA48   A0A182T4P5   Q8MY47   A0A1W4VD39   Q9NKY6   A0A2A4IVZ7   Q8MY50   Q9NKY7   A0A182PEK3   A0A182W2N9   Q8MY55   A0A0A1XMQ5   Q8MY54   A0A1L2FPA6   A0A084WB61   A0A182XVG1   Q8MY53   Q7YXJ4   A0A1I8JUF9   Q24613   Q8IA46   Q9NKZ1   A0A182LXD6   A0A1I8JUE1   Q9NKZ0   Q9NKZ2   Q8N0P9   Q8N0P5   Q9NKY5   O77407   A0A0P8Y7C4   B3MFX1   Q23834   B4KSB4   Q9N651   U5ETD3   Q8N0P8   Q8N0Q8   Q8MM80   Q8MY51   Q8MY52   Q9NKZ3   Q8MY49   Q8N0Q0   Q8N0Q4   Q8MM99   Q9N6Q7   Q8MY48   Q9GRF6   Q8N0Q2   A0A1L2FPA7   A0A182LFL7   Q8MM40   Q7PRB7   A0A182V378  

EC Number

3.2.1.1

Pubmed

19121390    26354079    22118469    26108605    25315136    30400621    + More
25348373    18760362    18314941    24495485    19476481    17028947    21529256    12136021    10742051    25830018    24438588    25244985    1699840    11961101    11040291    17994087    8798339    20966253    12364791    14747013    17210077   

EMBL

BABH01028504    RSAL01000030    RVE51685.1    KQ459761    KPJ20139.1    AGBW02008240    + More
OWR53974.1    ODYU01003330    SOQ41941.1    AGBW02007717    OWR54671.1    JRES01000462    KNC31016.1    ODYU01012544    SOQ58927.1    KA644631    AFP59260.1    ODYU01008873    SOQ52846.1    MK075190    AYV99593.1    BABH01018101    BABH01018102    BABH01018103    BABH01018104    NWSH01006767    PCG63259.1    GFDG01000548    JAV18251.1    OWR53975.1    AY333762    AAP97394.1    GDHF01005753    JAI46561.1    U04223    AAA03715.1    NWSH01001047    PCG72932.1    HQ424576    ADP89000.1    GAKP01019473    GAKP01019470    JAC39482.1    AY330289    AAP92665.1    HM357843    AEA76309.1    KQ459580    KPI99290.1    GDHF01027086    JAI25228.1    GAKP01019466    JAC39486.1    EF672102    ABV24963.1    EF600049    EU325552    ABU98614.1    ACB54942.1    AXCN02001626    GAMC01004278    JAC02278.1    GAMC01008204    JAB98351.1    GDHF01018640    JAI33674.1    FJ489868    ACL14798.1    RSAL01000004    RVE54528.1    AF467104    AAO17923.2    AJWK01015266    AJWK01015267    GQ274006    ACT64133.1    BABH01028500    BABH01028501    BABH01028502    MG941008    AYV89929.1    KPI99291.1    GAKP01019468    JAC39484.1    KX398855    ANZ79224.1    AF146757    AAO13691.1    AB078773    BAC06339.1    AB035066    BAA95440.1    NWSH01006246    PCG63558.1    AB078770    BAC06336.1    AB035065    BAA95439.1    AB078765    BAC06331.1    GBXI01001663    JAD12629.1    AB078766    BAC06332.1    KX398852    ANZ79221.1    ATLV01022314    KE525331    KFB47455.1    AB078767    BAC06333.1    AY333761    AAP97393.1    X76241    CAA53820.1    AF280891    AAO13754.1    AB035061    BAA95435.1    AXCM01000750    AB035062    BAA95436.1    AB035060    AB077431    BAA95434.1    BAB91544.1    AB077432    BAB91545.1    AB077436    BAB91549.1    AB035069    BAA95443.1    U53699    AAC35243.1    CH902619    KPU77312.1    EDV35653.1    U53477    U31121    CH933808    EDW08396.1    AB035057    AB035058    BAA95432.1    GANO01001973    JAB57898.1    AB077433    BAB91546.1    AB077391    BAB91504.1    AB077412    AB077413    AB077417    AB077423    AB077424    BAB91525.1    BAB91526.1    BAB91530.1    BAB91536.1    BAB91537.1    AB078769    BAC06335.1    AB078768    BAC06334.1    AB035059    BAA95433.1    AB078771    BAC06337.1    AB077430    BAB91543.1    AB077404    BAB91517.1    AB077388    AB077395    AB077406    AB077407    BAB91501.1    BAB91508.1    BAB91519.1    BAB91520.1    AB035067    AB035068    BAA95442.1    AB078772    BAC06338.1    U53478    AAB69330.1    AB077426    BAB91539.1    KX398853    ANZ79222.1    AB077409    AB077410    AB077411    AB077415    AB077421    AB077422    AB077425    AB077428    AB077429    BAB91522.1    BAB91523.1    BAB91524.1    BAB91528.1    BAB91534.1    BAB91535.1    BAB91538.1    BAB91541.1    BAB91542.1    AAAB01008859    EAA07513.6   

Proteomes

UP000005204    UP000283053    UP000053240    UP000007151    UP000095300    UP000037069    + More
UP000095301    UP000218220    UP000192223    UP000053268    UP000075886    UP000092461    UP000075901    UP000192221    UP000075885    UP000075920    UP000030765    UP000076408    UP000075900    UP000075883    UP000007801    UP000009192    UP000075882    UP000007062    UP000075903   

PRIDE

H9J6U7    H9IX93    C7EMF0    H9J6U8    Q23834   

Pfam

PF00128   Alpha-amylase        + More
PF02806   Alpha-amylase_C
PF00155   Aminotran_1_2

Interpro

IPR006047   Glyco_hydro_13_cat_dom        + More
IPR017853   Glycoside_hydrolase_SF       
IPR006046   Alpha_amylase       
IPR031319   A-amylase_C       
IPR006048   A-amylase/branching_C       
IPR013780   Glyco_hydro_b       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR015424   PyrdxlP-dep_Trfase       
IPR004839   Aminotransferase_I/II       
IPR001917   Aminotrans_II_pyridoxalP_BS       
IPR015422   PyrdxlP-dep_Trfase_dom1       

SUPFAM

SSF51445   SSF51445        + More
SSF53383   SSF53383       

Gene 3D

2.60.40.1180     3.40.640.10     3.90.1150.10    

ProteinModelPortal

H9J6U7   A0A3S2LDZ6   A0A0N0PEK4   A0A212FJR5   A0A1I8PGY5   A0A2H1VM91   + More
A0A212FLR1   A0A0L0CFJ8   A0A2H1X0X9   T1P7P3   A0A2H1WIR2   A0A3G5BII4   A0A1I8MTI4   H9IX93   A0A2A4IUB0   A0A1W4XRV5   A0A1L8EHU5   A0A212FJQ5   Q7YXJ3   A0A0K8W605   Q25590   A0A2A4JNE0   E5LCR9   A0A034VBJ8   Q7YXU5   F6K706   A0A194Q7A8   A0A0K8UF81   A0A034V839   A9XTK5   B1NLD4   A0A182Q521   W8BSY0   W8BYH3   A0A0K8V452   B8Y698   A0A3S2TT63   Q8I9Q2   A0A1B0GIQ4   C7EMF0   H9J6U8   A0A3G5ARJ9   A0A194Q160   A0A034VAD3   A0A1L2FPB8   Q8IA48   A0A182T4P5   Q8MY47   A0A1W4VD39   Q9NKY6   A0A2A4IVZ7   Q8MY50   Q9NKY7   A0A182PEK3   A0A182W2N9   Q8MY55   A0A0A1XMQ5   Q8MY54   A0A1L2FPA6   A0A084WB61   A0A182XVG1   Q8MY53   Q7YXJ4   A0A1I8JUF9   Q24613   Q8IA46   Q9NKZ1   A0A182LXD6   A0A1I8JUE1   Q9NKZ0   Q9NKZ2   Q8N0P9   Q8N0P5   Q9NKY5   O77407   A0A0P8Y7C4   B3MFX1   Q23834   B4KSB4   Q9N651   U5ETD3   Q8N0P8   Q8N0Q8   Q8MM80   Q8MY51   Q8MY52   Q9NKZ3   Q8MY49   Q8N0Q0   Q8N0Q4   Q8MM99   Q9N6Q7   Q8MY48   Q9GRF6   Q8N0Q2   A0A1L2FPA7   A0A182LFL7   Q8MM40   Q7PRB7   A0A182V378  

PDB

1VIW     E-value=7.36993e-157,     Score=1422

KEGG

101736396    K01176 alpha-amylase [EC:3.2.1.1] | (RefSeq) alpha-amylase 4N-like

PATHWAY

00500    Starch and sucrose metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0043169   GO:0004556   GO:0005975   GO:0103025   GO:0009058   GO:0016740   GO:0030170   GO:0046872   GO:0003824   GO:0016311   GO:0016791   GO:0006470   GO:0004674   GO:0016742  

SignalP

Position:   1 - 18,         Likelihood:  0.967376

 

 

Length:

505

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11163

Exp number, first 60 AAs:

0.10587

Total prob of N-in:

0.00273

outside

1  -  505

 

 

Pi

240.824248

Theta

168.302705

Tajima's D

1.385034

CLR

0.258557

CSRT

0.75741212939353

Interpretation

Uncertain