Gene

KWMTBOMO04388

Pre Gene Modal

BGIBMGA005281

Annotation

PREDICTED:_serine-enriched_protein_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr8(+):5556558-5576127      View in EpiBrowser

Full name

Alpha-amylase       + More
Serine-enriched protein      

Location in the cell

Nuclear   Reliability : 2.461

CDS

ATGAGAAGTGGGGCGTTAGCGGCTATGGAGGCGCAGCCTGACCTCAGCACCTTCGAGAACAAGAGCGGGCTGGCGGAGGACATGAAGTTCCTGGCGTCGATGCCTGAGCTCTGTGACGTCACCTTCCTGGTGGGAGACACCAGGGAGCCCGTTTGTGCTGTGAAAGCGGTCCTGGCGGCAAGGAGCAGAGTCTTCCAAAAAATGCTATATCAAGCTCCAAGTCCTCAGAGAAAGAAGGAACCAGGACCAAGAGAGAACAAGCTAAGATTATTCTTGAAACGTTCCTCGGAGCCTCTTCTGAATCTACAAAATGCAGCACAGCAGCCTTCTGCTCAGCAACATCAGACCTTAATAATCGAAGAATTTGAACCGGACGTTTTTCGTCAACTAATCGAGTATATCCATACCGGATGTGTTACTCTTCAACCAAGAACTCTTCTGGGAGTTATGAATGCGGCTGATTACTACGGCTTGGATGAGCTGCGACGAGCTTGCGCTGGTTTCGTACAGTGCTGTATCACCGTGGATACTGTATGCGCATTACTAGCTTCGGCCGAGCGTTACATACAATATAAGTGCACGAAGTCGCTGGTCCAGAAGGTTCTAGAATTCGTCGATGAGCATGGCAATGAGGTATTAAACTTGGGATCCTTCACGCTTCTTCCTCAACATGTTGTCAGATTGATCCTAGCAAGAGATGAACTCCGAGCGGATGAATTCACCAAATTTCAGGCAGCACTTATGTGGGGCAAAAAATTTTGCGACACGAACCAAAACACATCATTGAAAGACGTCATTGGGAATTTCTTGGAATACATACAGTTCCATAGAATTCCAGCGAATGTTCTCATGAGGGAAGTGCATCCGCTGGGCTTGGTACCGTATTCCATTATCATGAACGCTTTGGCGTATCAGGCAGACCCCGCTAGCGTAGATCCAGGGAAACTGTCTCCAGCGAGAATTCGACGAGCCGGCCGGTCGATGTCTGTGCAGTCGTCAATGGATCCCTACGGGTCCAACACCACCCTCTCCTCCACCGGCTCGAGCGATGTTCCGTCTTCAGACTCTCGGCACAACTAA

Protein

MRSGALAAMEAQPDLSTFENKSGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFQKMLYQAPSPQRKKEPGPRENKLRLFLKRSSEPLLNLQNAAQQPSAQQHQTLIIEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDELRRACAGFVQCCITVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILARDELRADEFTKFQAALMWGKKFCDTNQNTSLKDVIGNFLEYIQFHRIPANVLMREVHPLGLVPYSIIMNALAYQADPASVDPGKLSPARIRRAGRSMSVQSSMDPYGSNTTLSSTGSSDVPSSDSRHN

Similarity

Belongs to the glycosyl hydrolase 13 family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  Alpha-amylase

Uniprot

A0A2H1W2A6   A0A2A4J9C8   A0A212ELJ8   A0A0N1IQ65   A0A182R5H0   A0A182VLN3   + More
A0A182XD91   A0A182K8H4   A0A182PBN9   A0A182M4J2   A0A182NPH1   A0A182KSR9   A0A182Y1V7   A0A182QS62   A0A182GTH1   A0A084WLP8   E0VVS0   W5JQS1   A0A1Y1NDQ5   A0A182G5E8   A0A067RLF1   A0A182J907   A0A182HPZ9   A0A0J7L4B0   A0A1W4X3G2   A0A139WCU8   A0A336MNK9   A0A194Q1U0   A0A336MLJ2   A0A1W4XE57   E2BN74   Q7PV79   Q17M62   A0A1B0DHR1   A0A1I8PPP4   A0A151J7H1   A0A195D726   A0A1I8NIA6   K7IWI8   A0A0P9BZW6   A0A158NFL1   A0A0Q9XA06   A0A0R3NQU5   B0WEI5   A0A2A3EIW1   A0A0J9REF5   A0A0B4KFS9   V9I9S3   V9I9A5   A0A0Q5VLF4   A0A088AEG7   B4JWN0   A0A182FUE2   A0A1I8PPR4   A0A0L0BW10   A0A1A9X2G5   A0A182W989   A0A195AY50   A0A0Q9XAJ0   A0A0R3NQ29   A0A026WS64   A0A1A9XXV3   A0A0B4KEX5   A0A0R1DSS3   A0A0J9RE05   A0A1W4UZH5   A0A0Q5VM06   A0A1B6D7J1   A0A3L8DD70   A0A0Q9W2V4   A0A3B0IYB5   A0A0P8YCY7   A0A0R3NQE0   A0A1I8NIA2   B4MIU5   A0A0B4KF89   A0A0M8ZTH3   A0A1Y1NDS6   A0A1Y1NHG0   B4P5X7   A0A1B6EB80   A0A1B0CSE2   B4KSN2   F4X0D9   B4LPA1   B3MDK1   A0A1W4X3C2   Q28WP0   A0A0L7R7G7   B4H762   A0A0P5L4T0   A0A0P6FVQ0   A0A0P5L219   A0A1W4UZI0   A0A0P5JMY7   O61366   B4HT72   B4QI16   A0A1D2NB16   W8AKW0  

EC Number

3.2.1.1

Pubmed

22118469    26354079    20966253    25244985    26483478    24438588    + More
20566863    20920257    23761445    28004739    24845553    18362917    19820115    20798317    12364791    17510324    25315136    20075255    17994087    21347285    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26108605    18057021    23185243    24508170    17550304    30249741    21719571    27289101    24495485   

EMBL

ODYU01005621    SOQ46654.1    NWSH01002549    PCG68003.1    AGBW02014050    OWR42347.1    + More
KQ459761    KPJ20142.1    AXCM01009750    AXCN02001829    JXUM01002040    KQ560132    KXJ84271.1    ATLV01024268    KE525351    KFB51142.1    DS235813    EEB17476.1    ADMH02000607    ETN65653.1    GEZM01005573    GEZM01005572    JAV96084.1    JXUM01007104    JXUM01007105    JXUM01007106    KQ560230    KXJ83722.1    KK852439    KDR23868.1    APCN01003285    LBMM01000800    KMQ97466.1    KQ971363    KYB25707.1    UFQT01001639    SSX31285.1    KQ459580    KPI99293.1    SSX31284.1    GL449385    EFN82836.1    AAAB01008986    EAA00303.5    CH477208    EAT47783.1    AJVK01015394    AJVK01015395    KQ979748    KYN19340.1    KQ976750    KYN08662.1    CH902619    KPU76843.1    ADTU01014616    CH933808    KRG05295.1    CM000071    KRT03244.1    DS231910    EDS45701.1    KZ288230    PBC31628.1    CM002911    KMY94311.1    AE013599    AGB93562.1    JR036551    AEY57221.1    JR036552    AEY57222.1    CH954179    KQS62432.1    CH916375    EDV98368.1    JRES01001254    KNC24211.1    KQ976716    KYM76869.1    KRG05292.1    KRG05293.1    KRG05296.1    KRT03240.1    KRT03242.1    KRT03246.1    KRT03247.1    KK107119    EZA58798.1    AGB93563.1    CM000158    KRK00185.1    KMY94312.1    KMY94313.1    KQS62434.1    KQS62435.1    KQS62436.1    GEDC01015656    JAS21642.1    QOIP01000009    RLU18256.1    CH940648    KRF79309.1    OUUW01000001    SPP72775.1    KPU76842.1    KRT03243.1    CH963719    EDW72034.2    AGB93560.1    KQ435855    KOX70627.1    GEZM01005575    GEZM01005574    JAV96082.1    GEZM01005571    JAV96085.1    EDW91893.2    GEDC01002117    JAS35181.1    AJWK01025918    AJWK01025919    EDW10531.1    GL888497    EGI60097.1    EDW60210.1    EDV37464.2    EAL26627.2    KQ414640    KOC66789.1    CH479216    EDW33595.1    GDIQ01199961    JAK51764.1    GDIQ01042128    JAN52609.1    GDIQ01201260    JAK50465.1    GDIQ01202593    JAK49132.1    AF022713    AAF57972.2    CH480816    EDW48173.1    CM000362    EDX07387.1    LJIJ01000111    ODN02448.1    GAMC01020102    GAMC01020100    GAMC01020098    GAMC01020096    JAB86457.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000075900    UP000075903    UP000076407    + More
UP000075881    UP000075885    UP000075883    UP000075884    UP000075882    UP000076408    UP000075886    UP000069940    UP000249989    UP000030765    UP000009046    UP000000673    UP000027135    UP000075880    UP000075840    UP000036403    UP000192223    UP000007266    UP000053268    UP000008237    UP000007062    UP000008820    UP000092462    UP000095300    UP000078492    UP000078542    UP000095301    UP000002358    UP000007801    UP000005205    UP000009192    UP000001819    UP000002320    UP000242457    UP000000803    UP000008711    UP000005203    UP000001070    UP000069272    UP000037069    UP000091820    UP000075920    UP000078540    UP000053097    UP000092443    UP000002282    UP000192221    UP000279307    UP000008792    UP000268350    UP000007798    UP000053105    UP000092461    UP000007755    UP000053825    UP000008744    UP000001292    UP000000304    UP000094527   

PRIDE

O61366   

Pfam

PF00651   BTB        + More
PF07707   BACK
PF02806   Alpha-amylase_C
PF00128   Alpha-amylase
PF00652   Ricin_B_lectin

Interpro

IPR011705   BACK        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR031319   A-amylase_C       
IPR006048   A-amylase/branching_C       
IPR006047   Glyco_hydro_13_cat_dom       
IPR017853   Glycoside_hydrolase_SF       
IPR013780   Glyco_hydro_b       
IPR006046   Alpha_amylase       
IPR000772   Ricin_B_lectin       
IPR035992   Ricin_B-like_lectins       

SUPFAM

SSF54695   SSF54695        + More
SSF51445   SSF51445       
SSF50370   SSF50370       

Gene 3D

2.60.40.1180    

CDD

cd00161  RICIN

ProteinModelPortal

A0A2H1W2A6   A0A2A4J9C8   A0A212ELJ8   A0A0N1IQ65   A0A182R5H0   A0A182VLN3   + More
A0A182XD91   A0A182K8H4   A0A182PBN9   A0A182M4J2   A0A182NPH1   A0A182KSR9   A0A182Y1V7   A0A182QS62   A0A182GTH1   A0A084WLP8   E0VVS0   W5JQS1   A0A1Y1NDQ5   A0A182G5E8   A0A067RLF1   A0A182J907   A0A182HPZ9   A0A0J7L4B0   A0A1W4X3G2   A0A139WCU8   A0A336MNK9   A0A194Q1U0   A0A336MLJ2   A0A1W4XE57   E2BN74   Q7PV79   Q17M62   A0A1B0DHR1   A0A1I8PPP4   A0A151J7H1   A0A195D726   A0A1I8NIA6   K7IWI8   A0A0P9BZW6   A0A158NFL1   A0A0Q9XA06   A0A0R3NQU5   B0WEI5   A0A2A3EIW1   A0A0J9REF5   A0A0B4KFS9   V9I9S3   V9I9A5   A0A0Q5VLF4   A0A088AEG7   B4JWN0   A0A182FUE2   A0A1I8PPR4   A0A0L0BW10   A0A1A9X2G5   A0A182W989   A0A195AY50   A0A0Q9XAJ0   A0A0R3NQ29   A0A026WS64   A0A1A9XXV3   A0A0B4KEX5   A0A0R1DSS3   A0A0J9RE05   A0A1W4UZH5   A0A0Q5VM06   A0A1B6D7J1   A0A3L8DD70   A0A0Q9W2V4   A0A3B0IYB5   A0A0P8YCY7   A0A0R3NQE0   A0A1I8NIA2   B4MIU5   A0A0B4KF89   A0A0M8ZTH3   A0A1Y1NDS6   A0A1Y1NHG0   B4P5X7   A0A1B6EB80   A0A1B0CSE2   B4KSN2   F4X0D9   B4LPA1   B3MDK1   A0A1W4X3C2   Q28WP0   A0A0L7R7G7   B4H762   A0A0P5L4T0   A0A0P6FVQ0   A0A0P5L219   A0A1W4UZI0   A0A0P5JMY7   O61366   B4HT72   B4QI16   A0A1D2NB16   W8AKW0  

PDB

6FFM     E-value=2.2877e-05,     Score=114

KEGG

101738926    no KO assigned | (RefSeq) serine-enriched protein

GO

GO:0004556   GO:0103025   GO:0043169   GO:0005975   GO:0005515   GO:0015074   GO:0016311   GO:0016791   GO:0006470   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

Length:

359

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13467

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01103

outside

1  -  359

 

 

Pi

246.345391

Theta

184.01786

Tajima's D

0.510751

CLR

0.096029

CSRT

0.517674116294185

Interpretation

Uncertain