Gene

KWMTBOMO04387

Pre Gene Modal

BGIBMGA005280

Annotation

PREDICTED:_putative_polypeptide_N-acetylgalactosaminyltransferase_9_[Bombyx_mori]

Location

Bomo_Chr8(+):5518198-5521498      View in EpiBrowser

Full name

Polypeptide N-acetylgalactosaminyltransferase      

Alternative Name

Protein-UDP acetylgalactosaminyltransferase

Location in the cell

Cytoplasmic   Reliability : 1.791

CDS

ATGGTGGGTTGTGATTGTCATAAGTTCCACCAAGGCCCACTGTGTGGGCCATTAATAGCGTCCATCGGAGTGAACGGAAAGCCAGTGTTCTTGGAGAAGGATTTAAGAACCTATGTCGTTCAACTAGTGAAAAAAGGTTGGAAAGAGCATGCTTTCAATGAGTTTGTCAGTGACCTGATACCTTTGAATCGAAGTCTATTGGACCCTAGAGACGAATGGTGTAAATATAGAAACTATTCCACACAGCTACCCAGAGCTTCCGTTGTTATTTGTTTCCATAATGAAGCCTGGTCTACACTTCTAAGAACGGTACATTCAGTATTGAACCGAACGCCGCGCTATCTTTTAAAAGAAATCATTCTTGTTGATGATTTCTCTAATATGAATCATCTACAAGATCCATTGTACGAATACGTTCGAAAAATTGAAAGTATAATTCTCGTTCGAACAAGTCACCGACTGGGTCTTGTCAAAGCTAGACTGCTGGGAATAAAGTATGCCAGTGGTTCTGTTATAGTATTTCTTGATAGTCACTGCGAATGTACTGCAGGCTGGTTAGAGCCTCTATTAGATCGTATAGTACAAGATGATACACGGGTGGTCAGTCCGGTTGTAGACAGCATACACGAGGACACTTTTGAATATGTAGCACAAGATATAAACGATCTAAGAATTGGTGGATTCAACTGGAATCTGCGTTTCGTTTGGGAAGGAATTCCTCAAGAGGTTTTTTCAGAAAGGGAACACCCAGCTGCTCCAATTCAAACCCCGACAATATCGGGAGGGCTATTTGCGATTAATGCGAAATTTTTTGAAAGGCTCGGTTTCTATGATGACCAATTTGAAATTTGGGGAGCAGAGAATCTAGAACTATCTTTTAAAACTTGGATGTGCGGCGGCTCTTTGGAAATTGTGCCATGTTCTCATGTCGGTCACGTATTCAGAAAAAAGTTTCCTTACAGAAAAGAAGGCCAAACGTTCAGAAAGAATTTCGTACGACTAGCTGAAGTTTGGTTGGATGATTACTCTAAATACTTTTACCAAAGAATCGGAAATAAAAAAGGTAACTTTGGTGACGTGTCACAAAGGAAAGAACTAAGAAAAAAGTTGAATTGTAAATCATTTAAGTGGTATCTAGACAATGTTTATCCTCAGATCAGATTACCTGTGGACGATGCTGCAAATGGACAAGTAAGTTGGATAATTTTATTTATTCTTTAA

Protein

MVGCDCHKFHQGPLCGPLIASIGVNGKPVFLEKDLRTYVVQLVKKGWKEHAFNEFVSDLIPLNRSLLDPRDEWCKYRNYSTQLPRASVVICFHNEAWSTLLRTVHSVLNRTPRYLLKEIILVDDFSNMNHLQDPLYEYVRKIESIILVRTSHRLGLVKARLLGIKYASGSVIVFLDSHCECTAGWLEPLLDRIVQDDTRVVSPVVDSIHEDTFEYVAQDINDLRIGGFNWNLRFVWEGIPQEVFSEREHPAAPIQTPTISGGLFAINAKFFERLGFYDDQFEIWGAENLELSFKTWMCGGSLEIVPCSHVGHVFRKKFPYRKEGQTFRKNFVRLAEVWLDDYSKYFYQRIGNKKGNFGDVSQRKELRKKLNCKSFKWYLDNVYPQIRLPVDDAANGQVSWIILFIL

Cofactor

Mn(2+)

Similarity

Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.

Uniprot

H9J6Y8   A0A3S2P3U9   A0A2A4JN55   A0A2H1WP55   A0A212ELJ6   A0A139WCV3   + More
D6WY29   A0A1Y1JSR0   A0A2S2QBS4   A0A1Y1JVX7   A0A2M3Z0Y0   A0A1Y1JSS5   A0A3S2TPK5   A0A1B6FQG5   A0A2A4K279   A0A1B6CQL1   A0A1B6DUE2   A0A2J7QSW7   A0A2M3Z081   H9J6Y7   A0A2M3ZE15   A0A2H8TZ85   A0A2M3Z1W3   A0A2M3ZE60   A0A1B6MQ95   A0A2M4A0M0   A0A1B6CXC6   A0A084WLQ1   A0A1B6E8D1   A0A2R7WZE6   A0A182SF12   A0A2M4BG78   A0A1B6D6D2   A0A182FUE1   A0A1B6D832   A0A212F578   E0VG07   A0A2H1WZ65   A0A2M3YZD5   A0A2M3Z2J8   A0A0K8WEC4   J9K3C1   A0A182TK70   A0A182MQA0   A0A2M4CPY5   A0A0N1PIE7   A0A2M4CQV6   A0A194Q2R8   A0A2M4A019   A0A1Q3G2R0   A0A182PBP0   A0A1Q3G2H7   A0A1Q3G2S0   W5JMP6   A0A182Y1V6   A0A0Q9XJ23   A0A023EUU3   A0A0P4W672   A0A0P4VZX2   Q17M64   A0A1B6GPM6   B4KSN8   A0A1B6MB11   A0A182UF65   A0A182R5G9   A0A0Q9WYK2   A0A182K0L1   A0A182XD90   A0A182KSS0   A0A182HQ00   A0A182VEZ2   A0A0K8VWG7   A0A182W988   A0A034VRC2   B4MIT5   A0A2L2Y6F0   A0A182QCF3   A0A182GTH0   K7IWI9   A0A067RJ22   A0A034VQH2   A0A182G5E7   A0A224XL08   A0A0Q9W3D9   W8AHD0   A0A3S3P6C7   B4LP94   T1KB10   A0A0A9WQI9   A0A146LKK0   A0A0A9WSG8   A0A0N8P0D7   A0A2R5LF21   A0A0R3NXN7   A0A0P5X9L6   A0A0P5IB93   B4JWN6   B3MDJ4   A0A0P4YT76   A0A0P5AA84  

EC Number

2.4.1.-

Pubmed

19121390    22118469    18362917    19820115    28004739    24438588    + More
20566863    26354079    20920257    23761445    25244985    17994087    24945155    17510324    18057021    20966253    25348373    26561354    26483478    20075255    24845553    24495485    25401762    26823975    15632085   

EMBL

BABH01028467    RSAL01000030    RVE51690.1    NWSH01001001    PCG73158.1    ODYU01009641    + More
SOQ54214.1    AGBW02014050    OWR42348.1    KQ971362    KYB25760.1    EFA07904.2    GEZM01101766    JAV52314.1    GGMS01005975    MBY75178.1    GEZM01101768    GEZM01101767    GEZM01101765    JAV52311.1    GGFM01001423    MBW22174.1    GEZM01101764    GEZM01101763    GEZM01101762    GEZM01101761    GEZM01101759    GEZM01101758    JAV52322.1    RVE51691.1    GECZ01024871    GECZ01017323    JAS44898.1    JAS52446.1    NWSH01000233    PCG78159.1    GEDC01021578    JAS15720.1    GEDC01030799    GEDC01008002    JAS06499.1    JAS29296.1    NEVH01011211    PNF31680.1    GGFM01001145    MBW21896.1    BABH01028458    GGFM01006043    MBW26794.1    GFXV01007779    MBW19584.1    GGFM01001755    MBW22506.1    GGFM01006042    MBW26793.1    GEBQ01029662    GEBQ01001860    JAT10315.1    JAT38117.1    GGFK01001033    MBW34354.1    GEDC01020658    GEDC01019191    GEDC01010305    JAS16640.1    JAS18107.1    JAS26993.1    ATLV01024268    KE525351    KFB51145.1    GEDC01025537    GEDC01006763    GEDC01003108    JAS11761.1    JAS30535.1    JAS34190.1    KK856105    PTY24892.1    GGFJ01002886    MBW52027.1    GEDC01016173    GEDC01004329    GEDC01001082    JAS21125.1    JAS32969.1    JAS36216.1    GEDC01015957    GEDC01015451    GEDC01000234    JAS21341.1    JAS21847.1    JAS37064.1    AGBW02010253    OWR48859.1    DS235129    EEB12313.1    ODYU01012201    SOQ58380.1    GGFM01000881    MBW21632.1    GGFM01001917    MBW22668.1    GDHF01002925    JAI49389.1    ABLF02041136    ABLF02041160    AXCM01013860    GGFL01003073    MBW67251.1    KQ459761    KPJ20143.1    GGFL01003100    MBW67278.1    KQ459580    KPI99294.1    GGFK01000843    MBW34164.1    GFDL01001016    JAV34029.1    GFDL01001043    JAV34002.1    GFDL01001006    JAV34039.1    ADMH02000607    ETN65652.1    CH933808    KRG05300.1    GAPW01000852    JAC12746.1    GDRN01083666    JAI61638.1    GDRN01083665    JAI61639.1    CH477208    EAT47781.1    GECZ01027755    GECZ01005409    JAS42014.1    JAS64360.1    EDW10537.1    GEBQ01018710    GEBQ01006865    JAT21267.1    JAT33112.1    CH963719    KRF97468.1    APCN01003286    GDHF01009399    JAI42915.1    GAKP01014592    JAC44360.1    EDW72024.1    IAAA01004297    IAAA01004298    IAAA01004299    IAAA01004300    IAAA01004301    LAA02725.1    AXCN02001829    JXUM01002040    KQ560132    KXJ84270.1    KK852439    KDR23871.1    GAKP01014590    JAC44362.1    JXUM01007104    KQ560230    KXJ83721.1    GFTR01005918    JAW10508.1    CH940648    KRF79302.1    GAMC01021513    GAMC01021510    JAB85042.1    NCKU01000351    RWS15857.1    EDW60203.2    KRF79303.1    CAEY01001943    GBHO01032877    GBHO01032876    JAG10727.1    JAG10728.1    GDHC01010015    JAQ08614.1    GBHO01032875    GBHO01032874    GBRD01015740    GBRD01015738    JAG10729.1    JAG10730.1    JAG50086.1    CH902619    KPU76836.1    GGLE01003995    MBY08121.1    CM000071    KRT03238.1    GDIP01075348    JAM28367.1    GDIQ01239694    GDIQ01222845    JAK28880.1    CH916375    EDV98374.1    EDV37457.2    GDIP01223030    JAJ00372.1    GDIP01201991    JAJ21411.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000007266    UP000235965    + More
UP000030765    UP000075901    UP000069272    UP000009046    UP000007819    UP000075902    UP000075883    UP000053240    UP000053268    UP000075885    UP000000673    UP000076408    UP000009192    UP000008820    UP000075900    UP000007798    UP000075881    UP000076407    UP000075882    UP000075840    UP000075903    UP000075920    UP000075886    UP000069940    UP000249989    UP000002358    UP000027135    UP000008792    UP000285301    UP000015104    UP000007801    UP000001819    UP000001070   

PRIDE

H9J6Y8    H9J6Y7   

Pfam

PF00535   Glycos_transf_2        + More
PF00652   Ricin_B_lectin
PF02709   Glyco_transf_7C

Interpro

IPR001173   Glyco_trans_2-like        + More
IPR029044   Nucleotide-diphossugar_trans       
IPR035992   Ricin_B-like_lectins       
IPR000772   Ricin_B_lectin       
IPR027791   Galactosyl_T_C       

SUPFAM

SSF53448   SSF53448        + More
SSF50370   SSF50370       

Gene 3D

3.90.550.10    

CDD

cd00161  RICIN

ProteinModelPortal

H9J6Y8   A0A3S2P3U9   A0A2A4JN55   A0A2H1WP55   A0A212ELJ6   A0A139WCV3   + More
D6WY29   A0A1Y1JSR0   A0A2S2QBS4   A0A1Y1JVX7   A0A2M3Z0Y0   A0A1Y1JSS5   A0A3S2TPK5   A0A1B6FQG5   A0A2A4K279   A0A1B6CQL1   A0A1B6DUE2   A0A2J7QSW7   A0A2M3Z081   H9J6Y7   A0A2M3ZE15   A0A2H8TZ85   A0A2M3Z1W3   A0A2M3ZE60   A0A1B6MQ95   A0A2M4A0M0   A0A1B6CXC6   A0A084WLQ1   A0A1B6E8D1   A0A2R7WZE6   A0A182SF12   A0A2M4BG78   A0A1B6D6D2   A0A182FUE1   A0A1B6D832   A0A212F578   E0VG07   A0A2H1WZ65   A0A2M3YZD5   A0A2M3Z2J8   A0A0K8WEC4   J9K3C1   A0A182TK70   A0A182MQA0   A0A2M4CPY5   A0A0N1PIE7   A0A2M4CQV6   A0A194Q2R8   A0A2M4A019   A0A1Q3G2R0   A0A182PBP0   A0A1Q3G2H7   A0A1Q3G2S0   W5JMP6   A0A182Y1V6   A0A0Q9XJ23   A0A023EUU3   A0A0P4W672   A0A0P4VZX2   Q17M64   A0A1B6GPM6   B4KSN8   A0A1B6MB11   A0A182UF65   A0A182R5G9   A0A0Q9WYK2   A0A182K0L1   A0A182XD90   A0A182KSS0   A0A182HQ00   A0A182VEZ2   A0A0K8VWG7   A0A182W988   A0A034VRC2   B4MIT5   A0A2L2Y6F0   A0A182QCF3   A0A182GTH0   K7IWI9   A0A067RJ22   A0A034VQH2   A0A182G5E7   A0A224XL08   A0A0Q9W3D9   W8AHD0   A0A3S3P6C7   B4LP94   T1KB10   A0A0A9WQI9   A0A146LKK0   A0A0A9WSG8   A0A0N8P0D7   A0A2R5LF21   A0A0R3NXN7   A0A0P5X9L6   A0A0P5IB93   B4JWN6   B3MDJ4   A0A0P4YT76   A0A0P5AA84  

PDB

6E4R     E-value=1.33929e-129,     Score=1186

KEGG

101738790    K00710 polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41] | (RefSeq) putative polypeptide N

PATHWAY

00512    Mucin type O-glycan biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016757   GO:0030246   GO:0006486   GO:0016021   GO:0000139   GO:0016740   GO:0005794   GO:0032504   GO:0006493   GO:0031985  

Subcellular location

Golgi apparatus membrane  

Length:

406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0459300000000001

Exp number, first 60 AAs:

0.02948

Total prob of N-in:

0.01145

outside

1  -  406

 

 

Pi

221.915721

Theta

172.113112

Tajima's D

0.932736

CLR

0.191291

CSRT

0.641617919104045

Interpretation

Uncertain