Gene

KWMTBOMO04385  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005278

Annotation

cuticular_protein_RR-1_motif_3_precursor_[Bombyx_mori]

Location

Bomo_Chr8(+):5213708-5217720      View in EpiBrowser

Full name

Larval cuticle protein LCP-17      

Location in the cell

Extracellular   Reliability : 2.482

CDS

ATGAGAACTTACATCTTCCTCGCTTTGGTCGCGGTAGCCGTCGCTGACGTTTCTCACGTCGTGCGCACTGGCGAAGCTGATGCCCAAATTGTGTCGCAAGATGCTGACGTTTTCCCGGACAAATACCAGTACCAATATCAGACCAGCAACGGAATCAGTGGCCAGGAACAAGGAGCGCTCGTAAACGAGGGCCGTGAGGATGCATCCATCGCCGTCCAAGGTTCAAGCGGCTACACTGCCCCTGATGGTACTCCCATTCAGATCACTTACATTGCTGACGCCAACGGATACCAGCCTTCGGGTGCCCATCTGCCCACTACCCCAGCCCCTGTCCCAATCCCAGATTACATCGCCCGGGCCATCGAGTACATCAGAACTCATCCACCCAAGCCAGAGGTCGGCCAACGTATTTAA

Protein

MRTYIFLALVAVAVADVSHVVRTGEADAQIVSQDADVFPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPVPIPDYIARAIEYIRTHPPKPEVGQRI

Keywords

Complete proteome   Cuticle   Reference proteome   Signal  

Feature

chain  Larval cuticle protein LCP-17

Uniprot

C0H6J4   H9J6Y6   A0A3S2M5W3   A0A0N1PIW1   I4DLT5   B2DBG7   + More
A0A194Q7B5   A0A2H1W5N1   A0A212FID0   A0A2A4K2K2   I4DMG1   A0A0N1PJL0   I4DIL1   A0A194Q228   H9J6Y5   C0H6J3   W0GHP6   O02387   A0A0T6BD43   A0A3S2NH44   A0A2H1VH13   A0A1E1W218   A0A2A4IY21   S4S7G1   B2DBP1   C0H6N4   A0A2S1ZS80   A0A2W1CJG5   A0A1L8E3K8   R4G2S2   A0A182PN99   R4FKX5   T1I377   A0A0N1I9F1   A0A0K8SA91   I4DLT6   G8FVP6   A0A2A4K1N4   C0H6N5   A0A194Q164   A0A194R0P7   A0A067R439   A0A2H1X3S9   A0A194PX52   A0A2J7R753   A0A194R2A2   C0H6M4   A0A2H1VDB8   A0A182QNQ5   A0A0M4EMT1   A0A224XS48   A0A182S6R8   A0A1B0CM08   A0A1B0DQJ1   A0A182Y0U3   A0A182T445   A0A182HM56   C0H6J7   A0A0A1XLW3   A0A1Q3FZL7   A0A182LJP8   A0A182XCT0   Q7PNL5   V5IB19   A0A182RQ98   B0WPT5   A0A182IL85   Q7Q1A8   A0A182KTN1   A0A182U3Y3   A0A182VEM2   A0A182J1I2   W5JR27   A0A182U0L8   A0A2A4J2I4   A0A2S1ZS73   A0A1J1II08   B3M5M1   A0A1W4XNY4   A0A182MFL3   B3NCP1   A0A182RHG2   A0A034WSY4   A0A1W4XN34   A0A0L7LEM5   A0A084W2U4   K7IZX0   A0A182GEJ6   A0A182MJQ4   A0A182FFD4   A0A212F0M0   A0A182NMA0   K7IZX1   B4PEI4   A0A182YDM4   A0A182Q3H0  

Pubmed

19280704    19121390    26354079    22651552    18712529    22118469    + More
24514903    9443370    29712872    28756777    24845553    25244985    25830018    20966253    12364791    14747013    17210077    20920257    23761445    17994087    25348373    26227816    24438588    20075255    26483478    17550304   

EMBL

BR000504    FAA00505.1    BABH01028447    RSAL01000030    RVE51692.1    KQ460571    + More
KPJ13960.1    AK402253    BAM18875.1    AB264646    BAG30726.1    KQ459580    KPI99295.1    ODYU01006181    SOQ47814.1    AGBW02008397    OWR53494.1    NWSH01000233    PCG78158.1    AK402479    BAM19101.1    KQ460400    KPJ14975.1    AK401129    BAM17751.1    KQ459564    KPI99622.1    BR000503    FAA00504.1    KF672849    AHF55751.1    AB004766    LJIG01001715    KRT85225.1    RSAL01000041    RVE50919.1    ODYU01002513    SOQ40106.1    GDQN01010014    JAT81040.1    NWSH01005682    PCG64060.1    JF415082    AFC88815.1    AB264726    BAG30800.1    BABH01013074    BR000543    FAA00545.1    MF942791    AWK28314.1    NHMN01024364    PZC87412.1    GFDF01000761    JAV13323.1    GAHY01002351    JAA75159.1    GAHY01002329    JAA75181.1    ACPB03023185    KPJ13959.1    GBRD01016156    JAG49670.1    AK402254    BAM18876.1    JN082716    AER27814.1    PCG78157.1    BABH01013076    BR000544    FAA00546.1    KPI99296.1    KQ460883    KPJ11368.1    KK852994    KDR12717.1    ODYU01013214    SOQ59908.1    KQ459586    KPI97902.1    NEVH01006738    PNF36675.1    KPJ11380.1    BABH01013051    BABH01013052    BR000533    FAA00535.1    ODYU01001934    SOQ38825.1    AXCN02002061    CP012525    ALC45072.1    GFTR01002482    JAW13944.1    AJWK01017996    AJVK01008596    APCN01004355    BABH01028739    BABH01028740    BR000507    FAA00508.1    GBXI01002286    JAD12006.1    GFDL01002058    JAV32987.1    AAAB01008960    EAA11968.4    GALX01000205    JAB68261.1    DS232029    EDS32500.1    AAAB01008980    EAA14443.4    ADMH02000355    ETN66852.1    NWSH01003986    PCG65593.1    MF942789    AWK28312.1    CVRI01000054    CRK99895.1    CH902618    EDV40655.1    AXCM01002738    CH954178    EDV51338.1    GAKP01001667    JAC57285.1    JTDY01001457    KOB73824.1    ATLV01019697    KE525278    KFB44538.1    JXUM01058156    JXUM01058157    KQ561989    KXJ76980.1    AXCM01001822    AGBW02011079    OWR47244.1    CM000159    EDW94050.1    AXCN02000938   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    UP000218220    + More
UP000075885    UP000015103    UP000027135    UP000235965    UP000075886    UP000092553    UP000075901    UP000092461    UP000092462    UP000076408    UP000075840    UP000075882    UP000076407    UP000007062    UP000075900    UP000002320    UP000075880    UP000075902    UP000075903    UP000000673    UP000183832    UP000007801    UP000192223    UP000075883    UP000008711    UP000037510    UP000030765    UP000002358    UP000069940    UP000249989    UP000069272    UP000075884    UP000002282   

PRIDE

C0H6J4    H9J6Y6    H9J6Y5    C0H6J3    O02387    C0H6N4    + More
C0H6J7   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6J4   H9J6Y6   A0A3S2M5W3   A0A0N1PIW1   I4DLT5   B2DBG7   + More
A0A194Q7B5   A0A2H1W5N1   A0A212FID0   A0A2A4K2K2   I4DMG1   A0A0N1PJL0   I4DIL1   A0A194Q228   H9J6Y5   C0H6J3   W0GHP6   O02387   A0A0T6BD43   A0A3S2NH44   A0A2H1VH13   A0A1E1W218   A0A2A4IY21   S4S7G1   B2DBP1   C0H6N4   A0A2S1ZS80   A0A2W1CJG5   A0A1L8E3K8   R4G2S2   A0A182PN99   R4FKX5   T1I377   A0A0N1I9F1   A0A0K8SA91   I4DLT6   G8FVP6   A0A2A4K1N4   C0H6N5   A0A194Q164   A0A194R0P7   A0A067R439   A0A2H1X3S9   A0A194PX52   A0A2J7R753   A0A194R2A2   C0H6M4   A0A2H1VDB8   A0A182QNQ5   A0A0M4EMT1   A0A224XS48   A0A182S6R8   A0A1B0CM08   A0A1B0DQJ1   A0A182Y0U3   A0A182T445   A0A182HM56   C0H6J7   A0A0A1XLW3   A0A1Q3FZL7   A0A182LJP8   A0A182XCT0   Q7PNL5   V5IB19   A0A182RQ98   B0WPT5   A0A182IL85   Q7Q1A8   A0A182KTN1   A0A182U3Y3   A0A182VEM2   A0A182J1I2   W5JR27   A0A182U0L8   A0A2A4J2I4   A0A2S1ZS73   A0A1J1II08   B3M5M1   A0A1W4XNY4   A0A182MFL3   B3NCP1   A0A182RHG2   A0A034WSY4   A0A1W4XN34   A0A0L7LEM5   A0A084W2U4   K7IZX0   A0A182GEJ6   A0A182MJQ4   A0A182FFD4   A0A212F0M0   A0A182NMA0   K7IZX1   B4PEI4   A0A182YDM4   A0A182Q3H0  

KEGG

100379462    no KO assigned | (RefSeq) CPR3, BmorCPR3; cuticular protein RR-1 motif 3

GO

GO:0042302   GO:0016021   GO:0015074   GO:0016311   GO:0016791   GO:0006470   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

SignalP

Position:   1 - 15,         Likelihood:  0.994350

 

 

Length:

137

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.899949999999999

Exp number, first 60 AAs:

0.89966

Total prob of N-in:

0.10814

outside

1  -  137

 

 

Pi

215.09001

Theta

145.459149

Tajima's D

1.448268

CLR

0.237963

CSRT

0.769511524423779

Interpretation

Uncertain