Gene

KWMTBOMO04384  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005277

Annotation

_putative_cuticle_protein_[Bombyx_mori]

Location

Bomo_Chr8(+):5205498-5208638      View in EpiBrowser

Full name

Larval cuticle protein LCP-17      

Location in the cell

Extracellular   Reliability : 2.881

CDS

ATGAAATTCCTGATTGTCCTCGCCGTCGCGGTCGCGTGCGCAAGCGCCGACGTCTCCCACATCGTCAAGTCTGACGAGTACGCCGCCCCAGTGGTCAAATCCAGCTACGACATCACCCCTGAAGGCCACTTCCAGTTCAACTACGAGACCGGCAACGGAATTTACGCCCAGGCTGAAGGTGCCGTCAAGAACGTCAACTCAGAATACCCCGCCATCGAAGTTAAGGGTGCCTACAAGTACACTTCCCCTGACGGACAACCCATCGACCTCGCCTACGTCGCTGACGAGAACGGTTACCAACCCCAGGGAAGCCATCTGCCCACCCCTCACCCAATTCCCGAGGCGATCGCCCGCGCTCTTGCCTACATCGAGGCCCACCCCCCCAGCCCCTCCGTCGTGGAAAGAAAAGTCGTCGCCAACTTGTTAGGATAA

Protein

MKFLIVLAVAVACASADVSHIVKSDEYAAPVVKSSYDITPEGHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPIDLAYVADENGYQPQGSHLPTPHPIPEAIARALAYIEAHPPSPSVVERKVVANLLG

Keywords

Complete proteome   Cuticle   Reference proteome   Signal  

Feature

chain  Larval cuticle protein LCP-17

Uniprot

C0H6J3   W0GHP6   O02387   H9J6Y5   A0A2W1CJG5   A0A0K8SA91   + More
A0A2A4K1N4   B2DBP1   I4DLT6   A0A194Q164   A0A0N1I9F1   A0A2H1W455   A0A212FIE2   A0A2A4IY21   A0A2H1VDB8   C0H6N5   A0A2H1VH13   A0A194PX52   A0A3S2NH44   A0A194R2A2   I4DMG1   I4DIL1   G8FVP6   A0A194Q228   A0A0N1PJL0   A0A1E1W218   A0A0N1IU57   A0A1W4XDV2   A0A0L7QW15   A0A212F0G5   S4S7G1   A0A3S2LQF3   A0A310S9Q1   A0A194R0P7   A0A3S2M5W3   A0A1W4XNY4   K7IZX0   K7IZX1   A0A1W4XN34   A0A212F0M0   V5IB19   C0H6N1   C0H6J4   A0A3L8DVA1   A0A026WR46   A0A0K8S952   A0A2H1W5N1   T1P8T8   A0A0L7KWZ1   A0A088A4U7   A0A1J1II08   A0A2S1ZS73   C0H6N4   A0A1I8P594   A0A194Q3B6   B3M5M1   B4QJR1   A0A3Q8HFP9   A0A2A3EIE5  

Pubmed

19280704    24514903    9443370    19121390    28756777    22651552    + More
26354079    22118469    20075255    30249741    24508170    25315136    26227816    29712872    17994087    22936249   

EMBL

BR000503    FAA00504.1    KF672849    AHF55751.1    AB004766    BABH01028447    + More
NHMN01024364    PZC87412.1    GBRD01016156    JAG49670.1    NWSH01000233    PCG78157.1    AB264726    BAG30800.1    AK402254    BAM18876.1    KQ459580    KPI99296.1    KQ460571    KPJ13959.1    ODYU01006181    SOQ47813.1    AGBW02008397    OWR53495.1    NWSH01005682    PCG64060.1    ODYU01001934    SOQ38825.1    BABH01013076    BR000544    FAA00546.1    ODYU01002513    SOQ40106.1    KQ459586    KPI97902.1    RSAL01000041    RVE50919.1    KQ460883    KPJ11380.1    AK402479    BAM19101.1    AK401129    BAM17751.1    JN082716    AER27814.1    KQ459564    KPI99622.1    KQ460400    KPJ14975.1    GDQN01010014    JAT81040.1    KQ435696    KOX80821.1    KQ414716    KOC62802.1    AGBW02011079    OWR47245.1    JF415082    AFC88815.1    RSAL01000030    RVE51693.1    KQ762842    OAD55410.1    KPJ11368.1    RVE51692.1    OWR47244.1    GALX01000205    JAB68261.1    BABH01013064    BR000540    FAA00542.1    BR000504    FAA00505.1    QOIP01000003    RLU24357.1    KK107144    EZA57574.1    GBRD01016546    JAG49280.1    SOQ47814.1    KA644545    AFP59174.1    JTDY01004881    KOB67640.1    CVRI01000054    CRK99895.1    MF942789    AWK28312.1    BABH01013074    BR000543    FAA00545.1    KPI97900.1    CH902618    EDV40655.1    CM000363    CM002912    EDX11361.1    KMZ00967.1    MG601560    AYA49885.1    KZ288251    PBC31052.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000053105    UP000192223    UP000053825    UP000002358    UP000279307    UP000053097    UP000095301    UP000037510    UP000005203    UP000183832    UP000095300    UP000007801    UP000000304    UP000242457   

PRIDE

C0H6J3    O02387    H9J6Y5    C0H6N1    C0H6J4    C0H6N4    + More

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6J3   W0GHP6   O02387   H9J6Y5   A0A2W1CJG5   A0A0K8SA91   + More
A0A2A4K1N4   B2DBP1   I4DLT6   A0A194Q164   A0A0N1I9F1   A0A2H1W455   A0A212FIE2   A0A2A4IY21   A0A2H1VDB8   C0H6N5   A0A2H1VH13   A0A194PX52   A0A3S2NH44   A0A194R2A2   I4DMG1   I4DIL1   G8FVP6   A0A194Q228   A0A0N1PJL0   A0A1E1W218   A0A0N1IU57   A0A1W4XDV2   A0A0L7QW15   A0A212F0G5   S4S7G1   A0A3S2LQF3   A0A310S9Q1   A0A194R0P7   A0A3S2M5W3   A0A1W4XNY4   K7IZX0   K7IZX1   A0A1W4XN34   A0A212F0M0   V5IB19   C0H6N1   C0H6J4   A0A3L8DVA1   A0A026WR46   A0A0K8S952   A0A2H1W5N1   T1P8T8   A0A0L7KWZ1   A0A088A4U7   A0A1J1II08   A0A2S1ZS73   C0H6N4   A0A1I8P594   A0A194Q3B6   B3M5M1   B4QJR1   A0A3Q8HFP9   A0A2A3EIE5  

KEGG

692362    no KO assigned | (RefSeq) CPR2, BmorCPR2, LCP17; cuticular protein RR-1 motif 2

GO

GO:0042302   GO:0016021   GO:0015074   GO:0016311   GO:0016791   GO:0006470   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

SignalP

Position:   1 - 16,         Likelihood:  0.999487

 

 

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.25589

Exp number, first 60 AAs:

0.25589

Total prob of N-in:

0.05726

outside

1  -  143

 

 

Pi

238.388974

Theta

206.942394

Tajima's D

0.48094

CLR

0.701704

CSRT

0.513274336283186

Interpretation

Uncertain