Silkworm Genome Informatics Database

Gene

KWMTBOMO04373

Pre Gene Modal

BGIBMGA005272

Annotation

PREDICTED:_uncharacterized_protein_LOC105841330_[Bombyx_mori]

Location

Bomo_Chr8(+):4954818-4961063 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.489

CDS

ATGTTGCCTGCATTCGGCCTGCTTAATGGCGCCTGGGACGCTGATGTTTGTGGCCTCCTTGATAATGTCCGTCCAACTGAACGATTGAATGTCTTATACGAACGTAACTGGACACGGCTGGTCCACGAGCAACTCCGCAAGTTCGAGTCCTCTATTGTGGCTGCAGCGAGACAGTCCCCCGACTCACAAGTACCGGAGTTGATGATGGAAAGCAAATGGAGTTTCTCTGGAGCTCTGATATATTGCGTCACTCTGATAACCACTATAGGATATGGAAATGTTTCACCGCGCACGGCTGCCGGTCGAGCGGCCACGGTGGCATATGCAGCAGCTGGTGTACCACTAACTTTGGCTTGTTTAGCGGGATTGGGGGCTTCACTGGCACGTCACGCCAGATTAGCGTGGCTCAAAGCTACAAGAAGAAAAGTACCTAGCTCTTGGAAGAAGGACGGAGAAATAGAAACCCATCTTCAACTACACGAACAACAACGACTCTTACCACAGCCGACGGAGCATAACCAGTACACATCATTCCCGCCTCGAAGTCACAGATCTCCGGGAACTGTGAAAGCCAGAGCTGGAGACAGAGGACAATATTCTCAAGTTTTTGAGCGAGTCCCTGCTAGTCCTCGAGCTGCAACGCTAGGACGTGTGAAGCGGAGTGCTTTGGTTGATGAGCCTCATGGATCAGCCGCCTTACAAACACAAACGCTCGACAGAAAAAAAGTAATCAGTATGAAGTGCTTGGCGACAGTCCATAGCCCCGTTAGAGGTAGAGCCAGAAATACTATCCAGAGACCAAGAGGAGCAGCTATTGAACAACTCATAGCTGAAGAATGTGGAGAATTAGCACTCAATCGAAGTCAAGATGATTTAGATGATTCTGAGGATCCTGACGAAGGTCTATGTCCCCATGATACGCCATCGAGAGTGCCTTTGATTTGGAGCGAAGATAACCACAAAAGCAAGAGCTGTGCCGTTCCAAGCACAAGCACAACCGTCAGTGTTCAGCATCACATGCATAACACCGTAGAACATTGCCATATCCCAGCTGGTATCGTGCTGTTTCTCCTACTGGCCTACATATGTGTTGGAGCGGCGATCTTTTCCGCATGGGAAAATTGGAGTTTCCTAGACGCCGCCTACTTCTGCTTCATAGCCCTAGCGACAATCGGCTTCGGGGATTTCGTTCCGACCAGCTTACTGACTGCCAAACACAGTACTGAAAACTCCAAAAGTGAATACATTCAGATGATCGCATGCTGCGCTTACTTAGTTTTCGGATTGATCCTAATTGCGATGTCATTTAGCCTACTTCAGGATGAAGTGGTTTCTCGATGTTCCCAGTTAGCTAACACTTTAGGTTTGTCTCGTCAATGA

Protein

MLPAFGLLNGAWDADVCGLLDNVRPTERLNVLYERNWTRLVHEQLRKFESSIVAAARQSPDSQVPELMMESKWSFSGALIYCVTLITTIGYGNVSPRTAAGRAATVAYAAAGVPLTLACLAGLGASLARHARLAWLKATRRKVPSSWKKDGEIETHLQLHEQQRLLPQPTEHNQYTSFPPRSHRSPGTVKARAGDRGQYSQVFERVPASPRAATLGRVKRSALVDEPHGSAALQTQTLDRKKVISMKCLATVHSPVRGRARNTIQRPRGAAIEQLIAEECGELALNRSQDDLDDSEDPDEGLCPHDTPSRVPLIWSEDNHKSKSCAVPSTSTTVSVQHHMHNTVEHCHIPAGIVLFLLLAYICVGAAIFSAWENWSFLDAAYFCFIALATIGFGDFVPTSLLTAKHSTENSKSEYIQMIACCAYLVFGLILIAMSFSLLQDEVVSRCSQLANTLGLSRQ

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
Belongs to the sterol desaturase family.

Uniprot

A0A2H1WWP4 H9J6Y0 A0A2A4IZX4 A0A3S2P3W0 A0A212FJ73 A0A194Q143 + More

Pubmed

19121390 22118469 26354079

EMBL

ODYU01011231 SOQ56844.1 BABH01028433 NWSH01004495 PCG65046.1 RSAL01000030 + More
RVE51703.1 AGBW02008302 OWR53784.1 KQ459580 KPI99302.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000007151 UP000053268

PRIDE

H9J6Y0

Pfam

PF07885 Ion_trans_2 + More
PF04116 FA_hydroxylase

Interpro

IPR003280   2pore_dom_K_chnl        + More
IPR013099   K_chnl_dom
IPR006694   Fatty_acid_hydroxylase

ProteinModelPortal

A0A2H1WWP4 H9J6Y0 A0A2A4IZX4 A0A3S2P3W0 A0A212FJ73 A0A194Q143 + More

PDB

3UKM E-value=5.95382e-08, Score=137

KEGG

105841330 no KO assigned | (RefSeq) uncharacterized LOC105841330

GO

GO:0016021 GO:0005267 GO:0008610 GO:0005506 GO:0016491 GO:0006811 GO:0016020 GO:0015074 GO:0016311 GO:0016791 GO:0006470 GO:0004674 GO:0009058 GO:0016742 GO:0003824 GO:0071805

Length:

459

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

109.69495

Exp number, first 60 AAs:

0.00393

Total prob of N-in:

0.24902

inside

1 - 72

TMhelix

73 - 95

outside

96 - 104

TMhelix

105 - 127

inside

128 - 348

TMhelix

349 - 371

outside

372 - 380

TMhelix

381 - 403

inside

404 - 415

TMhelix

416 - 438

outside

439 - 459

Pi

186.549219

Theta

180.493137

Tajima's D

0.084157

CLR

0.529945

CSRT

0.392730363481826

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics