Gene

KWMTBOMO04372

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr8(-):4810358-4811512      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.709

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATTGTTGCGGTTATGCGCCAATTCAAATTTTTAACATACTGAAAAATTTTAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGTTTCGAGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATACCGGGAAATTCTTTTTTCGGATGAAAAAAATTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTATATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGACTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGTAA

Protein

MEWTLKEDRVAVIALHCCGYAPIQIFNILKNFNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGFRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKNFTVEESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVYFCEKGVKTNAVVYTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIW

Similarity

Belongs to the TGF-beta family.

Uniprot

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LXK8   + More
A0A3S2M6X4   A0A3S2NF68   A0A3S2LTJ6   G3G3K1   P90693   A0A3S2NP17   A0A3S2P5Q6   A0A3S2LQG1   A0A226D9B6   A0A3S2NQU1   A0A2S2R6V1   A0A3S2NJ26   A0A016WN34   A0A016VJ32   W6NUW0   A0A016WY15   A0A1L5BY18   A0A0N4XXA5   H3ETI8   E3NJL6   H3E4E9   E3MXK7   A0A2G5T9N6   A0A1I7T5D4   H3EE07   E3N1H1   E3M1J2   A0A2G5SZY0   E3NHD7   H3ESY7   E3MQK2   E3N4H8   H3FLR7   A0A016WKB6   A0A016TV39   H3DS69   A0A1I8CC25   E3N749   A0A183G443   A0A3P8B6H1   A0A183FUJ2   A0A3P8A0U6   A0A2H2I0K4   A0A1I7SRX5   H3E1D2   A0A1I7SJQ8   A0A2G5SF52   A0A2G5TN79   A0A3P8SXY7   T2MJK7   E3NDP6   H3EXA9   A0A1I7RU52   H3FF09   A0A3P8RL19   H3DZR2   A0A2G5VIT1   A0A2G5TZM3   E3NHK7   A0A3P8S822   A0A3Q1B1F2   A0A3P8TI71   A0A368FVD9   A0A368H7I1   E3M897   A0A3Q1B3B7   A0A3P8RUJ2   A0A2G5TZ20   H3FES1   A0A2G5TSG2   A0A016S0M1   A0A3Q1BHV9   A0A016W3L5   E3ND45   A0A0N4Y502   H3FB13  

Pubmed

12653938    9014339    25730766    25527032    18806794    26829753    + More
21909270    24065732   

EMBL

AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    AB473770    BAH20555.1    RSAL01000133    RVE46339.1    RSAL01000022    RVE52367.1    RSAL01000063    RVE49524.1    RSAL01000012    RVE53510.1    JF779677    AEO90418.1    U47917    AAB47739.1    RSAL01000020    RVE52632.1    RSAL01000016    RVE53060.1    RSAL01000470    RVE41612.1    LNIX01000030    OXA41211.1    RSAL01000009    RVE53890.1    GGMS01016485    MBY85688.1    RSAL01000677    RVE41245.1    JARK01000176    EYC41234.1    JARK01001345    EYC27589.1    CAVP010059404    CDL95787.1    JARK01000059    EYC44525.1    KX931010    APL98300.1    UYSL01019905    VDL71189.1    DS268747    EFP00909.1    DS268492    EFP11689.1    PDUG01000005    PIC23776.1    DS268508    EFO83264.1    DS268421    EFO88618.1    PDUG01000006    PIC20538.1    DS268673    EFO98001.1    DS268466    EFP06959.1    DS268525    EFO85497.1    JARK01000255    EYC39473.1    JARK01001411    EYC06502.1    DS268545    EFO88382.1    UZAH01029309    VDP05368.1    UZAH01027257    VDO90094.1    PDUG01000012    PIC13506.1    PIC28734.1    HAAD01005865    CDG72097.1    DS268612    EFO94085.1    PDUG01000001    PIC51673.1    PDUG01000004    PIC32571.1    DS268679    EFO98285.1    JOJR01000583    RCN36166.1    JOJR01000015    RCN51257.1    DS268428    EFO94379.1    PIC32570.1    PIC29926.1    JARK01001658    EYB84158.1    JARK01001337    EYC34439.1    DS268606    EFO93488.1    UYSL01020440    VDL74616.1   

Proteomes

UP000283053    UP000198287    UP000024635    UP000025227    UP000038043    UP000271162    + More
UP000005239    UP000008281    UP000230233    UP000095282    UP000095286    UP000050761    UP000005237    UP000095284    UP000265080    UP000257160    UP000252519   

PRIDE

Q8ITJ9    B1Q3L9    B1Q3L5    B1Q3L8    P90693   

Pfam

PF00019   TGF_beta        + More
PF00005   ABC_tran
PF01061   ABC2_membrane
PF13358   DDE_3
PF00292   PAX
PF18397   IKBKB_SDD
PF00069   Pkinase
PF00250   Forkhead
PF10320   7TM_GPCR_Srsx

Interpro

IPR009057   Homeobox-like_sf        + More
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR013525   ABC_2_trans       
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR011009   Kinase-like_dom_sf       
IPR041185   IKBKB_SDD       
IPR029071   Ubiquitin-like_domsf       
IPR000719   Prot_kinase_dom       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       

SUPFAM

SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF52540   SSF52540       
SSF56112   SSF56112       
SSF54236   SSF54236       
SSF46785   SSF46785       

Gene 3D

2.10.90.10     1.10.10.10    

CDD

cd00059  FH

ProteinModelPortal

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LXK8   + More
A0A3S2M6X4   A0A3S2NF68   A0A3S2LTJ6   G3G3K1   P90693   A0A3S2NP17   A0A3S2P5Q6   A0A3S2LQG1   A0A226D9B6   A0A3S2NQU1   A0A2S2R6V1   A0A3S2NJ26   A0A016WN34   A0A016VJ32   W6NUW0   A0A016WY15   A0A1L5BY18   A0A0N4XXA5   H3ETI8   E3NJL6   H3E4E9   E3MXK7   A0A2G5T9N6   A0A1I7T5D4   H3EE07   E3N1H1   E3M1J2   A0A2G5SZY0   E3NHD7   H3ESY7   E3MQK2   E3N4H8   H3FLR7   A0A016WKB6   A0A016TV39   H3DS69   A0A1I8CC25   E3N749   A0A183G443   A0A3P8B6H1   A0A183FUJ2   A0A3P8A0U6   A0A2H2I0K4   A0A1I7SRX5   H3E1D2   A0A1I7SJQ8   A0A2G5SF52   A0A2G5TN79   A0A3P8SXY7   T2MJK7   E3NDP6   H3EXA9   A0A1I7RU52   H3FF09   A0A3P8RL19   H3DZR2   A0A2G5VIT1   A0A2G5TZM3   E3NHK7   A0A3P8S822   A0A3Q1B1F2   A0A3P8TI71   A0A368FVD9   A0A368H7I1   E3M897   A0A3Q1B3B7   A0A3P8RUJ2   A0A2G5TZ20   H3FES1   A0A2G5TSG2   A0A016S0M1   A0A3Q1BHV9   A0A016W3L5   E3ND45   A0A0N4Y502   H3FB13  

PDB

5CR4     E-value=3.78149e-07,     Score=128

KEGG

101740752    no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677   GO:0005576   GO:0008083   GO:0005524   GO:0016021   GO:0006355   GO:0004672   GO:0003700   GO:0043565   GO:0005634   GO:0004930   GO:0006508   GO:0015074   GO:0016311   GO:0016791   GO:0006470   GO:0004674   GO:0009058   GO:0016742   GO:0003824  

PANTHER

PTHR11848  

Subcellular location

Secreted  
Nucleus  

Length:

287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

16.21209

Exp number, first 60 AAs:

13.8513

Total prob of N-in:

0.14561

POSSIBLE N-term signal

sequence

outside

1  -  287

 

 

Pi

144.651795

Theta

63.652269

Tajima's D

2.36063

CLR

0.444084

CSRT

0.930153492325384

Interpretation

Uncertain