SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04371
Annotation
hypothetical_protein_RR46_05489_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 1.092
 

Sequence

CDS
ATGTCGTCAGAAGTGTCATTAGAAGGAAGGGAGCGACCCGGATTCTTTCGTCGTGCAGGCTCCGCTATCACAAGGGCAGCCTGCTCACAAATAGGACTCGTGATTCTGGTAGTGGTCTACGTGTTACTTGGCGCGGTTCTGTTCGAATATCTCGAGTCTGGTCCTGAAGTAAAGAAGCGGTCTGCGATACAGAAATCCAGAGAAGAATGCTTGAAGGAACTGTGGGCGATTACAGGCTCCATTAGATGTGGTCTGTTTATCAACGACGACTAG
Protein
MSSEVSLEGRERPGFFRRAGSAITRAACSQIGLVILVVVYVLLGAVLFEYLESGPEVKKRSAIQKSREECLKELWAITGSIRCGLFINDD

Summary

Similarity
Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
Pfam
PF07885   Ion_trans_2
Interpro
IPR013099   K_chnl_dom        + More
IPR003280   2pore_dom_K_chnl       

Ontologies

Topology

Length:
90
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.16641
Exp number, first 60 AAs:
22.15726
Total prob of N-in:
0.76234
POSSIBLE N-term signal
sequence
inside
1  -  25
TMhelix
26  -  48
outside
49  -  90
 
 

Population Genetic Test Statistics

Pi
175.665475
Theta
158.124191
Tajima's D
-0.6193
CLR
0.621645
CSRT
0.213189340532973
Interpretation
Uncertain
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