Silkworm Genome Informatics Database

Gene

KWMTBOMO04360

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]

Location

Bomo_Chr8(+):4364263-4370479 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.09 Nuclear Reliability : 1.419

CDS

ATGGCACATGTAGAAAAGTTATTACCCCAGGAGGGTACCTCCCGCTCCGCGGGGGGAGAATCCCTCCGTGCGGTCGAGCGATCGGCCGCACGCTGCCCCACCGTTTCTGGGGGGGGCAAACATTGCCACGACGAAGGGGGCGACAGCACGGGTCGCGTAAGGGACAGGGTCCCCACCGTGCGCCTCGAGCGCTGCGAGAGCCTTATCTCGCTCTACTCGGCGCGGAGCTCCGCGAGGGGCGACGCGTCTAGTGGGCGGGAGACGCCAGCGCTGTTTGTGGACAGCACCCGACAGCGGACACGGCGGAAGCGGAAGTCGGCTCGACAGCCGGCGTCCTCCGCTCCGTCCGACTCGTCGGAAGGAGAGCCTGCCAGCGCCAAGTACATGGCGTTGGCGGAAGGGCCGGCGGCTGCTTCGGCGCCGCCCGCCATTGACTTTGACAAGCCGTCGTCTCGCGGACTGGACGCTGCCTCTTCGGCGCAGTCCAGGGCCGCCTGCCGTGAGGCAAAAAATAAAAATAGAAAACTAGAAGAGATCGAGCGCCTACAGCGATCCCTAACGCTGGTGGGTCCCTCTGACCCCCTCCGATCGTGTAAAATCGTTGGAAAAATAGTTGAGACCATCGCGGCCAAGTCGACTGCAGGCCTCAAGGGCTCAGAAGTGTCGGCCATGAAATCTGCGGCCGCCACACTTGAGGAAAGGCTGCAGGACGTCGTGGACCGCACCACGACGACGGAGACGGCGGGCTTGCGGCAGGAAGTGGCTCTGCTGCACACCCGCCTCGAACAAGTATCGGCCGAGAATGGCCTGCTTCGGGCGGAGAACGGTCAGCTCCGCGTCGACATGGCCGAGCTGCGAACAATGGTTGCCGATCTCATCGAGCGGCAACGCGGCTCCGCCCCTGTCCCTCCTCCGCCCGAAGCAGAAGGCCTCACTGAGGTCGAGGAGCTGAGGCGGCAGCTCCTTATACAGGAGGCGCGCAGCTCCAAAGTGGAGCGGGCGAGACCGCCCCTCGCCCATGAGGTGAAAGGCAGCGCGCCTGTGCCCGCACCTCGTAGAACAGTGGTCGCTAAAACTTATAGCGGCCCCAAACAGACAGCCACACCTGCGAGGATTCCCGCCGCGACTGTCTCGCGGTCAGCAGCTTCGGGGGCAACAAGATCTGCCCCCCCAAAGAAACCGGCATCCGCTCCTGCTCCGCCCCAGCCTGCGAAGGCAGGGCCCGCCAGGAGCCGGACAAAGAAGAAGGGAGGCGTCAACGCCGCCAAACCGGCACCGACTCCCCAGCCCCGCCCGCTGCCCCCGGCCCCGGCCAATATGGAAGAGGCCTGGACAACGGTGGTGCGGCGCGGGCCCAAAAAGGTGGCGGCGCCTCTTGCGCCGCGCCCCAAGCCCGCCCCTGCGGCCGCCGCTCCCCGTCAAGAGGGTCGAGCGGAGCCGAGGGGCCGAAACGGACGAAGGAGGCCGCGCGCCCCGCGGTCGGCTGCAGTGGTAGTGGAGCTGCTGCCCGCCGGCAAAGAAAAGGGCATCACCTACCACGAGGTGATGACCCAGGCGCGCGGCGGCGTGAATGTGGACGCCCTCGGCGTGGAGGGGGGCATCAAGGTCCGGCAGACGGCCAACGGGGCCCGTCTCATAGAGTGCCCCGGCCCGAACACCAACGCCGCGGCCGAAAAATTGGCGGCCCGGCTGAGGGAGATCCTGCCGGACCCCGAGGTGGTGCGCATCGCGCGGCCCGTGAAGATGGGTGAAGTCAAAATCACGGGCCTCGACGAGTGCGCCACGAAGGAGGAGGTTGCCGCGGCCATCGCGTCGCAGGGCAACTGCGCCCTCGCCGACGTCAAAGTCGGGGAGCTCCGGGAAACATATTCTGGTACCCGGACGGCGTGGGCGCGTTGCCCGATTGCAACGGCGACCCTCCTGGCCACCCCTCCACAGGGGCGGCCTTCCGACAGCCCAGGAAGGCTGCGCGTGGGCTGGGTAGTGGCCCACGTGCAGCTGCAGGATGCCAGGCCGTGGCGCTGTCTTCGGTGCTTCGGCACCGGCCACGGCCTCGCCAAGTGCCCCTCGACCGTGGACCGCAGCGGCTTGTGTTTCCGCTGCGGCCAACCGGGGCACAAGGCAGCCTCCTGCACCACAGCCGCGCCGCACTGCGTCTTGTGCGACGCGGCCAAAAGGAAGGCCGACCACCGGGCCGGGGGCCCGGCGTGTAAATCTGCCCCCTCCTCTACAAAAACGAGGAGGGGCGGAAAGAAAAAGAAGCCGGCTGCAACAAGGGCAGCCGGCGAGTCAGTTCCCGCCGCGGCTGTTGTCGAGCCGCAGGGCGGGACAGACGAGGGAGCGATGGACGATCTCCTCGTCCACACCATGGCGGAGTGGTCAATCGACGTCGCTGTCGCCGCGGAGCCGTACTTCGTCCCCACCGACCAGGACTGCTGGATCGGGGACGTCGACGGCTCCGTGGCCATCGTACTTAGACAGTCCGCGGCGTTACCCCCCTTGGATATGGTGGCCAGGGGACCCGGGTACGTCGCGGCTAGGATCGACGGGACCGTCGTGATCGGGGCGTACTTTTCTCCGAACAGGAGCCTCGCCGAGTTCGAGCGGTTTCTGGGCGGGCTCGAGGTGCTCTTGCACCGCTTCGGGTCCCGCCCTGTCATCGTCGCGGGGGACCTCAATGCCAAGTGTATGGCTTGGGGCTCCCCCCGCACGGATTCGCGAGGCGAGGCTCTTTCGGAGTGGGCGATCGCGACCGGCCTCTGTCTTCTAAACAGAGGTACGGTCGCGACTTGCGTGCGGTGGAACGGGGAATCTCACGTGGACGTTACGTTCGCGTCCCCGTCCGCCGTGCGCCGCACCCGCGGCTGGCGCGTACTCGAGGGGGCGGAGACGCTCTCGGACCACAGATACGTCCGATTCGAGCTCTCTGCCTCCTCCTTGTCGTCGTCAGCCGCGGGCGCCCGCGGCGAGGAGGAGCTCCCGCAAGGTGCGCCCCGTTCGTTCCCCAGGTGGGCCTTGAAACGGATGAACAAGGAGTTGCTGATGGAGGCGGCCGCTGTTGCTGCGTGGGCGCCAAAACCCGCGCGGCTCGCGGACGTGGATGCGGAGGTCGACTGGTTCCGGGGCACCATGGCAAACATTTGTGATGCCGCCATGCCCCGGGTCGGCCCCCGAGCACCACGTGGGGGTGCGTTCTGGTGGTCGCCCGAGATCGCGAGACTCCGTGAGGAGTGCGTGAGGGCGCGCCGCCGGAGCGCACGCCACCGCCGCCGCCGTCGTCGCGACGCTACGTTCGCGGAGACGGCGGCCCGGCTGCACGCTGACTGTCGTCAAAAACAGACGGCGCTGCAGCTGGCCATCGGCGAGGCCAAGAAGCAGAGCATGAAGACTCTCCTGGAGTCGCTCGACGAAGATCCCTGGGGGCGCCCATACAAGATGGTTCGCAGAAAACTGCAGCCGTGGGCGCTCCCGGTGACCGAGCGGCTCCAGCCTCGGCAGCTGCGGGAGATAGTTTCCGCGCTTTTCCCGCCGGCAGCGGGGGGGGACTTTGAGCCCCCCCAGATGGACGCCACGTGGGGCACACCTCCACGTCGCCCCAGCGTTCCCGCTGCCGAGGAGCCCCCTCCCCCTATTACGGGGGCGGAGATCCATGCGGCCGTGTCCAAAATGAGAGCGAAGGACACGGCCCCCGGCCCTGACGGCGTTCACGGCCGGGTCTGGAGCTTGGCCTTCGAGGCCCTAGGGGACCGGCTCGGGGGGCTTTTCGAAGCGTGCCTCGAGTCGGGACGGTTCCCGTCGAAATGGAAGACGGGCAGACTGGTCCTTCTGCGGAAGGACGGGCGCCCCGCGGACTCACCCGCGGGCTATCGCCCCATCGTGTTGCTGGACGAAGCGGGCAAGATGCTCGAGAGAATCGTCGCGGCCCGCATCGTCCGGCACCTGACCGAGACGGGTCCCGATCTTTCGGCGGAGCAATACGGCTTCAGAGAGGGCCGCTCGACTATCGACGCAATTCTGCGCGTGCGGGCCCTCTCCGACGAAGCCGTATCCCGGGGCGGGGTGGCGATGGCGTTATCCTTAGATGTAAGGAACGCCTTCAACACCCTGCCCTGGTCGGTGATCGCGGGGGCGCTGGAGTATCACGGCGTCCCCGCATACCTCCGCCGACTGATCGGCTCCTACCTCGAGGGCAGGTCGATCCAGTGCATCGGACACGGTGGGGCGATGTACCGCTTCCCCGTCGAGCGCGGTGTTCCGCAGGGGTCCGTCCTGGGCCCCCTGCTGTGGAACATCGGCTACGACTGGGTCCTGCGGGGCGTCATTCGGGGACCCCTCCCCGGGCTCAGCGTAATTTGTTACGCTGACGACACGTTGATCGTAGCTCCGGGGAGGGACTACCGGGAGTCTGCCCGTCTGGCGTGCGCAGGCGTGGCACACGTCGTCACCAGGATCCGACGGTTGGGGCTCGAGGTGGCGCTCGACAAAACCCAGGCCCTGATGTTTCACGGGCCGGGACGAGCGCCGCCTCTGGGTGCCCACCTCGTGATCGGAGGCGTCCGCGTCGGGGTCGGGGTGACCGGTCTTCGGTACCTCGGCCTCGAACTGGATGGTCGGTGGAACTTCCGCGCTCACTTTGAGAAGTTGGGCCCTCGACTGATGGCGACGGCCGGCTCTCTGAGCCGGCTGCTTCCAAACGTCGGGGGTCCCGATCAGGTGGCGCGCCGCCTCTACATGGGGGTGGTGCGGTCGATGGCACTATACGGGGCTCCCGTATGGTGCCACGCCCTGACCCGCGAGAACGTCGCGGCGCTGCGACGTCCGCAGCGCGCGATCGCGGTCAGGGCGATCCGAGGATACCGCACCGTCTCCTTCGAGGCGGCGTGCTTGCTCGCCGGGGCGCCACCCTGGGACCTGGAGGCGGAGGCGCTCGCTGCCGATTACCGGTGGCGTAGCGACCTCCGCTCTAGGGGGGAAGGGCGCCCCAGCGAAGGTGTAGTTCGAGCGCGGAGGCTCCACTCTCGGCGGTCCGTGCTGGAGGCGTGGTCTCGCCGCTTGGCGGACCCGTCGGCCGGCCTCCGAACCGTCGAGGCGGTCCGCCCGGTTCTCGCGGACTGGGTGGGCCGCGACCGCGGATGCCTCACCTTCCGGCTAACGCAGATGCTTACCGGCCATGGTTGTTTCGGCCGGTACTTGCACAAGATAGCCGGAAGGGAACCGACGGCGCAGTGCCACCACTGCGCGGACCGCGACGAGGAAGACACAGCGGAACACACGCTGGCGCGTTGCTCTGGATTCGACGAGCAACGCGCCGCCCTCGTCGCGGTCATTGGAGAGGACCTCTCGCTGCCGCGCGTCGTGGCTACGATGCTCGGCAGCGACGCGTCCTGGAAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCAGAAGGAGGCGGCGGAGCGAGAGAGGGAGAGCTCTTCCCTTTCCGCACCGATCCGTCGCCGTCGAGCCGGGGGCCGGAGGCGGGAATACGCCCGTACGTCCCGGCCCCTGTAG

Protein

MAHVEKLLPQEGTSRSAGGESLRAVERSAARCPTVSGGGKHCHDEGGDSTGRVRDRVPTVRLERCESLISLYSARSSARGDASSGRETPALFVDSTRQRTRRKRKSARQPASSAPSDSSEGEPASAKYMALAEGPAAASAPPAIDFDKPSSRGLDAASSAQSRAACREAKNKNRKLEEIERLQRSLTLVGPSDPLRSCKIVGKIVETIAAKSTAGLKGSEVSAMKSAAATLEERLQDVVDRTTTTETAGLRQEVALLHTRLEQVSAENGLLRAENGQLRVDMAELRTMVADLIERQRGSAPVPPPPEAEGLTEVEELRRQLLIQEARSSKVERARPPLAHEVKGSAPVPAPRRTVVAKTYSGPKQTATPARIPAATVSRSAASGATRSAPPKKPASAPAPPQPAKAGPARSRTKKKGGVNAAKPAPTPQPRPLPPAPANMEEAWTTVVRRGPKKVAAPLAPRPKPAPAAAAPRQEGRAEPRGRNGRRRPRAPRSAAVVVELLPAGKEKGITYHEVMTQARGGVNVDALGVEGGIKVRQTANGARLIECPGPNTNAAAEKLAARLREILPDPEVVRIARPVKMGEVKITGLDECATKEEVAAAIASQGNCALADVKVGELRETYSGTRTAWARCPIATATLLATPPQGRPSDSPGRLRVGWVVAHVQLQDARPWRCLRCFGTGHGLAKCPSTVDRSGLCFRCGQPGHKAASCTTAAPHCVLCDAAKRKADHRAGGPACKSAPSSTKTRRGGKKKKPAATRAAGESVPAAAVVEPQGGTDEGAMDDLLVHTMAEWSIDVAVAAEPYFVPTDQDCWIGDVDGSVAIVLRQSAALPPLDMVARGPGYVAARIDGTVVIGAYFSPNRSLAEFERFLGGLEVLLHRFGSRPVIVAGDLNAKCMAWGSPRTDSRGEALSEWAIATGLCLLNRGTVATCVRWNGESHVDVTFASPSAVRRTRGWRVLEGAETLSDHRYVRFELSASSLSSSAAGARGEEELPQGAPRSFPRWALKRMNKELLMEAAAVAAWAPKPARLADVDAEVDWFRGTMANICDAAMPRVGPRAPRGGAFWWSPEIARLREECVRARRRSARHRRRRRRDATFAETAARLHADCRQKQTALQLAIGEAKKQSMKTLLESLDEDPWGRPYKMVRRKLQPWALPVTERLQPRQLREIVSALFPPAAGGDFEPPQMDATWGTPPRRPSVPAAEEPPPPITGAEIHAAVSKMRAKDTAPGPDGVHGRVWSLAFEALGDRLGGLFEACLESGRFPSKWKTGRLVLLRKDGRPADSPAGYRPIVLLDEAGKMLERIVAARIVRHLTETGPDLSAEQYGFREGRSTIDAILRVRALSDEAVSRGGVAMALSLDVRNAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEGRSIQCIGHGGAMYRFPVERGVPQGSVLGPLLWNIGYDWVLRGVIRGPLPGLSVICYADDTLIVAPGRDYRESARLACAGVAHVVTRIRRLGLEVALDKTQALMFHGPGRAPPLGAHLVIGGVRVGVGVTGLRYLGLELDGRWNFRAHFEKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSMALYGAPVWCHALTRENVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHSRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIAGREPTAQCHHCADRDEEDTAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDFCESTISQKEAAERERESSSLSAPIRRRRAGGRRREYARTSRPL

Uniprot

A0A0J7KQK3 A0A0J7KRB8 A0A0J7KFH2 A0A0J7N0R3 A0A0J7NFZ0 J9KNS1 + More
A0A139WAH4

Pubmed

18362917 19820115

EMBL

LBMM01004272 KMQ92618.1 LBMM01003988 KMQ92922.1 LBMM01008278 KMQ89009.1 + More
LBMM01012412 KMQ86235.1 LBMM01005474 KMQ91485.1 ABLF02018808 KQ971388 KYB24913.1

Proteomes

UP000036403 UP000007819 UP000007266

Pfam

PF14529 Exo_endo_phos_2 + More
PF00078 RVT_1

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf
IPR036691   Endo/exonu/phosph_ase_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom

SUPFAM

SSF56219 SSF56219 + More
SSF57756 SSF57756

Gene 3D

3.60.10.10

ProteinModelPortal

A0A0J7KQK3 A0A0J7KRB8 A0A0J7KFH2 A0A0J7N0R3 A0A0J7NFZ0 J9KNS1 + More
A0A139WAH4

PDB

1WDU E-value=3.21438e-08, Score=145

KEGG

105842745 no KO assigned | (RefSeq) transcription initiation factor TFIID subunit 4-like

GO

GO:0008270 GO:0003676 GO:0003964 GO:0004714 GO:0007169 GO:0004713 GO:0005524 GO:0004674 GO:0009058 GO:0016742 GO:0003824

Length:

1845

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18186

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1845

Pi

1.398571

Theta

1.306167

Tajima's D

0

CLR

125.343432

CSRT

0.416479176041198

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree