SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04346
Pre Gene Modal
BGIBMGA005261
Annotation
PREDICTED:_4-hydroxyphenylpyruvate_dioxygenase-like_[Amyelois_transitella]
Full name
4-hydroxyphenylpyruvate dioxygenase      
Location in the cell
Cytoplasmic   Reliability : 1.652
 

Sequence

CDS
ATGGCGGACGGCACTCTAGAAGATTCTGTCGCCTGGTACGAAAAGAATTTAAATATGCACCGGTTCTGGTGCGTGGACTACAGCCACGATTTAGTGCCCTATTCCTGCATAAATTCTGCATCAGTAATAAATCAAGATGAAACTATATTGTTGTCTATGAACGAAGCAGCGAAAGGATTGCGGCCTTCGAGCAAAGCGTCAGAGTTCGTTAAAGCGCTCGGTACGTCTGGTGTTGAACACATAGCACTGTACACTGATGACATTGTAAATACTATGCAAAACTTAAAAAAACGCGGTGCCGAAATAATAACGTGGCCGTCAACATACTACGAGATAATCAGAGAAAAACTGACCAAGAGTACAGTGAAAGTCGCAGAGAGCCTAACCGCTCTGCAGGAAAATAATATCCTGATCGACTTCGATGAAAGAGGCTACATGCTGCAGGCCTTCACTAAGCACGTACAAGCCCGACCGACGGTTTTCATAGAAATTTTGCAGAGGAGAAACCATAGGGGATTCGGCGCTATGAATTACAAATGGGTTTTCGAAGCGATCGAGCGATTGGAAACCGCTAAAGATATTAAAAGCGATGAAAGTAAGACAGACAAGTGA
Protein
MADGTLEDSVAWYEKNLNMHRFWCVDYSHDLVPYSCINSASVINQDETILLSMNEAAKGLRPSSKASEFVKALGTSGVEHIALYTDDIVNTMQNLKKRGAEIITWPSTYYEIIREKLTKSTVKVAESLTALQENNILIDFDERGYMLQAFTKHVQARPTVFIEILQRRNHRGFGAMNYKWVFEAIERLETAKDIKSDESKTDK

Summary

Cofactor
Fe cation
Similarity
Belongs to the 4HPPD family.
Feature
chain  4-hydroxyphenylpyruvate dioxygenase
EMBL
NWSH01007556    PCG62913.1    ODYU01007234    SOQ49835.1    KQ461196    KPJ06289.1    + More
KQ459580    KPI99320.1    AGBW02011602    OWR46441.1    BABH01028342    JTDY01004486    KOB68089.1    JTDY01009626    KOB63210.1    GDIP01224287    JAI99114.1    GDIQ01056025    JAN38712.1    GDIP01180138    JAJ43264.1    GDIQ01123049    JAL28677.1    GDIP01208738    JAJ14664.1    GDIP01211946    JAJ11456.1    GBYX01436353    JAO44985.1    NWSH01007858    PCG62781.1    GDIP01224286    JAI99115.1    GDIP01111603    JAL92111.1    GDIP01180137    JAJ43265.1    GDIP01200342    JAJ23060.1    GDIP01183491    JAJ39911.1    GDIP01131345    JAL72369.1    GDIQ01096560    JAL55166.1    GDIP01138193    JAL65521.1    GDIP01198880    JAJ24522.1    GCES01012400    JAR73923.1    CH896779    KRK05659.1    NWSH01008285    PCG62625.1    AYCK01000982    GDIP01181889    JAJ41513.1    GDIQ01157331    JAK94394.1    GDIQ01140597    JAL11129.1    GDIQ01142393    JAL09333.1    GDIP01076462    GDIQ01068717    LRGB01001361    JAM27253.1    JAN26020.1    KZS12608.1    GDIQ01267568    JAJ84156.1    GDIQ01247403    GDIP01084650    JAK04322.1    JAM19065.1    GDIQ01162286    JAK89439.1    GDIQ01250658    JAK01067.1    GDIQ01092552    JAL59174.1    GFDF01001239    JAV12845.1    JXLN01018432    KPM11969.1    GDIQ01239002    JAK12723.1    HACM01010903    CRZ11345.1    GDIQ01106498    JAL45228.1    GDIQ01228910    JAK22815.1    LVZM01000231    OUC49891.1    GDIQ01028672    JAN66065.1    KK478773    KFQ59855.1    GL732609    EFX71536.1    GDIQ01157330    JAK94395.1    IACF01000265    LAB66059.1    AE014296    AY047523    AAF51602.1    AAK77255.1    GDIP01021619    JAM82096.1    AERX01013659    KK566660    KFW04739.1    CH902618    EDV40084.2    JYDP01000003    KRZ18404.1    AAAB01008968    EAA13250.3    KB523138    EMP37107.1    UFQT01001230    SSX29585.1    GDIP01217134    JAJ06268.1    GDKW01001094    JAI55501.1    KX572142    ANZ03346.1    GDIQ01079712    JAN15025.1    CH954178    EDV52519.1    CH891904    EDX00031.1    CH964161    EDW80014.2    JYDT01000002    JYDV01000010    KRY93426.1    KRZ43398.1    JYDO01000014    KRZ78141.1    KQ971372    EFA10456.1    GBYB01014595    JAG84362.1    GGFK01006635    MBW39956.1    AXCM01006965    CM002912    KMZ00796.1    BT012317    AAF51601.1    AAS77442.1    ADMH02001127    ETN64019.1    MUZQ01000225    OWK54910.1    KR181950    ALJ76674.1    GAMD01002738    JAA98852.1   
Pfam
PF00903   Glyoxalase
Interpro
IPR005956   4OHPhenylPyrv_dOase        + More
IPR037523   VOC       
IPR041736   4OHPhenylPyrv_dOase_N       
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR004360   Glyas_Fos-R_dOase_dom       
IPR041735   4OHPhenylPyrv_dOase_C       
IPR018146   Glyoxalase_1_CS       
SUPFAM
SSF54593   SSF54593       
Gene 3D
PDB
1SQI     E-value=9.74689e-46,     Score=459

Ontologies

Topology

Length:
203
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00235
Exp number, first 60 AAs:
0.00178
Total prob of N-in:
0.05460
outside
1  -  203
 
 

Population Genetic Test Statistics

Pi
176.20596
Theta
18.030943
Tajima's D
0.625377
CLR
0.332588
CSRT
0.554022298885056
Interpretation
Uncertain
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