Silkworm Genome Informatics Database

Gene

KWMTBOMO04328

Pre Gene Modal

BGIBMGA014103

Annotation

PREDICTED:_WAS/WASL-interacting_protein_family_member_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr8(-):3406587-3434689 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.479

CDS

ATGGCTCCGAAACCGCCGCCTCCTCCTGGTCCGCCGCCGCCGCCCGGACCTCCTCCTCCTCCCGTGTTCGGAGGATCTAAAAAAGGCGGTGGAGCCGACGACAGAAATGCGCTTCTAAGTTCTATTAGGCAGGGCGCTAAGTTAAAAAAGACCGTAACAGTGGACAAAAGTGGACCATACATACCAGGGAAAGTGAATAATGTACCTAGCGGAACCGTGGCTGGAAACGGAGTGAAGGCTCCTCCGCCAATGCAGAATGGAGGTGGTGCACCTCCTGGGCTCGGTGGATTGTTTGCTGGGGGAATGCCAAAGCTACGGCCTACAGGGAAATTGGCAGGTTCAACACCAAATGGCCAAGTTAGGACAGATGTTCCACGGCATCCCCTACAACCAGCACCCTCACCCCAAAGGTCACCAGAAAAGACAAGACCCACAATGCCATCTCCAGGGGCTAATGTCAGTGCCCTCTCAGCTGTCATATCTGGTACGCTAGCAGCCCGAGAACTAATCAGAGAACGGGAGGCCCCTGTTCACCCTGCAATAAGAAGACAGACTAGCGATATAAAGACTAGGGGACCACCTCCACAACCACCAGTACAGAAATCAGCAATGCCTTTGAGTTCATCAGATTCGGTGCTCACGACCGGTTCGATATCGGAACGGATCAACAACCTTCAGCAGCAGGCGACCGAGCCGCATCAGACGAGCGTCGGGGTCACCCTGCAGAGGAACAAGAGCTCGCTGCACGCCGCCTCTCAATCGGCCCTCGGTGGCAGCATGACGTCACTATCGTCGGCTCCGACGCCGCGCGTGCCGTCTCCGGCGTCGTCGCTCTCCACGTCGGACCTGTCGGACCGTCCGCGCAGTCACGGGAAACCCAACCTGGCCCCGAAGCCGCCCGGCCCGGCGCCGGACCGACCCTCGCCGCCGCCCAAGAAATTAATCGTAAACGGCAAGATGGCTTCCCGGACGCAGAGCATGAGGGTCCCTAGGTCCCCGCCGGTGTCCCCGCCGTCCCCGCCGTCCCCCGGGGGCCGCCCCGCGCACCTGCCGCCCGCGCCCGCCCTGCCCCCCGTCGGGACCAAGAACCCGGCCTCGCACTTCGGTACGCTACGGGCGCCGCGCGTGCTGCGCCCCCCCGGCGTGTCGCCCCCGCCGCCCCCGCCCCCCGCGCGGCACGCCTCGCTCGCACACCCGCCGCCCCCGCCCCCGCACCACAGGCAGAACAGCTCCGGCGGTGACGACCCCCCGGCCCCCGCGCCCCCCGTCCGCGGCTCCTCCATGCGCGCGGCCGACCTGGAGGCCAGGTTCGCGGAGATGTTCCACCCGGCGACGCGCTTCCCGCCCCCCGACCCCTTCCTGCGCATCGACAAGGGGTACAGCAGCGCCACCCTCGCCGGTAAGTTCACATGA

Protein

MAPKPPPPPGPPPPPGPPPPPVFGGSKKGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVKAPPPMQNGGGAPPGLGGLFAGGMPKLRPTGKLAGSTPNGQVRTDVPRHPLQPAPSPQRSPEKTRPTMPSPGANVSALSAVISGTLAARELIREREAPVHPAIRRQTSDIKTRGPPPQPPVQKSAMPLSSSDSVLTTGSISERINNLQQQATEPHQTSVGVTLQRNKSSLHAASQSALGGSMTSLSSAPTPRVPSPASSLSTSDLSDRPRSHGKPNLAPKPPGPAPDRPSPPPKKLIVNGKMASRTQSMRVPRSPPVSPPSPPSPGGRPAHLPPAPALPPVGTKNPASHFGTLRAPRVLRPPGVSPPPPPPPARHASLAHPPPPPPHHRQNSSGGDDPPAPAPPVRGSSMRAADLEARFAEMFHPATRFPPPDPFLRIDKGYSSATLAGKFT

Uniprot

A0A3S2L3C0 A0A212EPS6 A0A194RKN6 A0A194QEE4

Pubmed

22118469 26354079

EMBL

RSAL01000190 RVE44692.1 AGBW02013410 OWR43476.1 KQ460211 KPJ16536.1 + More
KQ459302 KPJ01836.1

Proteomes

UP000283053 UP000007151 UP000053240 UP000053268

Pfam

PF02205 WH2

Interpro

IPR003124 WH2_dom

ProteinModelPortal

A0A3S2L3C0 A0A212EPS6 A0A194RKN6 A0A194QEE4

KEGG

101747115 K19475 WAS/WASL-interacting protein | (RefSeq) vegetative cell wall protein gp1

PATHWAY

04144 Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0003779 GO:0003677 GO:0006351 GO:0008270 GO:0004672 GO:0005515 GO:0004674 GO:0009058 GO:0016742 GO:0003824

Length:

470

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00117

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00026

outside

1 - 470

Pi

190.635588

Theta

166.354524

Tajima's D

0.481016

CLR

0.13112

CSRT

0.503024848757562

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics