SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04325
Pre Gene Modal
BGIBMGA014105
Annotation
inorganic_phosphate_co-transporter_[Bombyx_mori]
Full name
Putative inorganic phosphate cotransporter      
Location in the cell
PlasmaMembrane   Reliability : 4.892
 

Sequence

CDS
ATGAGGACGAACATGTCGGTCGCCATCGTTGCTATGGTCAACCACACAGCTCTTACTGTCATCGCTGAAGAGATAGACACCGAATGCGGCCCAGTCAATCCTAACAAAACCAGCGTGGTCTCAACCCAAGACGGCGACTACGCCTGGGACTCTTCATTACAAGGCTATATTTTATCGTCGTTTTTCTACGGTTATGTCATCACACAAATTCCTTTCGGGATTCTGTCGAAGAGGTTCGGAGCTCGCTTGTTCCTCGGAGTGGGTATGCTGATAAACTCGGTGTTCGGTCTGCTAGTGCCGGTCGCCGCCGAAGCTGGGTACGGATGGCTCATCGTCGTCAGGTTCATACAAGGGCTGGGAGAGGGGCCCATCGTGCCGTGCACTCACGCTATGCTAGCCAAGTGGGTGCCGCCGAATGAGAGAAGTAGAATGGGTGCTGCCGTATATGCCGGTGCTCAGTTCGGTACGGTTATATCTATGCCGCTGTCCGGTCTGCTGTCGGCGTATGGTTTCGCCGGCGGCTGGCCCTCGATCTTCTACGTGTTTGGCATGATCGGAACGGTCTGGTGCCTCGCGTTCCTGTTCTTCGTATCCGAGGACCCCGAACAGTGTCCCCGGATCAAAGAGACCGAGAAGAAGTACATCGTCAGCTCTCTTTGGGGTGCCGCCGGATCTAGCTCGCCACCCATACCCTGGGGCAAGATTCTTACTTCGATGCCGTTCTGGGCGATTATGTTGGCCCACATCGGACAGAACTACGGCTATGAGACTCTGCTCACCGAATTGCCAACATTTATGAGACAAGTTCTACACTTCTCCATCAAAGATAACGGTTTCGTTTCGGCCTTGCCGTATCTGTGCATGTGGTTGTTCTCGATGTTCATATCTGTGGTCGCCGACTGGATGTTGTCCAGTGGACGATTCAACCACACTCAGGTCAGGAAGATTATTAACAGCATTGGTCAGTATGGTCCGGCGGCGGGCTTGTTCATCGCCGCGAACACGGGATGTAACCCGGCGGCCACCGTGGCGATATTGGCTGTGGGCGTCGGACTCAACGGTGGTATCTACTCTGGCTTCAAGGTTAACCACTTGGATATTTCGCCACGTTTCGCCGGCATTCTGATGGCGTTCACCAACTGTCTCGCCAACTTGATGGGGCTGTTGGCTCCCATCGTCGCTGGACACATCATTGAGGGCAGACCCACTCAAGCGCAATGGAGGAAAGTGTTCTACATCGCGGGCGGAGTTTACGTTGTCTGTGCCACGTTCTACAACATCTTCGGTTCGGGCAGGAGACAGGACTGGGACAACCCCGCCGACGACGAAGCCAATGCCAAGAAGGCTGCCAGCAAGAAAGCCGATAAGATCGAGAGGAAAGCCGCCAAGAATCAAAATCACGCGGAAACAGCGCACTGA
Protein
MRTNMSVAIVAMVNHTALTVIAEEIDTECGPVNPNKTSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGLGEGPIVPCTHAMLAKWVPPNERSRMGAAVYAGAQFGTVISMPLSGLLSAYGFAGGWPSIFYVFGMIGTVWCLAFLFFVSEDPEQCPRIKETEKKYIVSSLWGAAGSSSPPIPWGKILTSMPFWAIMLAHIGQNYGYETLLTELPTFMRQVLHFSIKDNGFVSALPYLCMWLFSMFISVVADWMLSSGRFNHTQVRKIINSIGQYGPAAGLFIAANTGCNPAATVAILAVGVGLNGGIYSGFKVNHLDISPRFAGILMAFTNCLANLMGLLAPIVAGHIIEGRPTQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDWDNPADDEANAKKAASKKADKIERKAAKNQNHAETAH

Summary

Similarity
Belongs to the major facilitator superfamily. Sodium/anion cotransporter family.
Keywords
Alternative splicing   Complete proteome   Ion transport   Membrane   Reference proteome   Sodium   Sodium transport   Symport   Transmembrane   Transmembrane helix   Transport  
Feature
chain  Putative inorganic phosphate cotransporter
splice variant  In isoform A.
EMBL
BABH01032046    BABH01032047    BABH01032048    BABH01032049    GQ871754    ADM86145.1    + More
ODYU01001403    SOQ37536.1    NWSH01004855    PCG64649.1    GAIX01007711    JAA84849.1    KQ460211    KPJ16538.1    AGBW02013410    OWR43479.1    GBYB01008462    JAG78229.1    GBYB01008464    JAG78231.1    NNAY01000014    OXU31970.1    KQ435078    KZC14436.1    GL446282    EFN88143.1    KQ414727    KOC62578.1    GFDF01009311    JAV04773.1    KZ288215    PBC32454.1    GFDF01009347    JAV04737.1    GFDF01009310    JAV04774.1    GECU01027223    JAS80483.1    GECU01022451    JAS85255.1    NEVH01016298    PNF25938.1    PNF25940.1    GECU01008931    JAS98775.1    DS235172    EEB12999.1    GEDC01025953    JAS11345.1    GEDC01018785    JAS18513.1    GANO01002715    JAB57156.1    LBMM01001134    KMQ96847.1    KK852965    KDR13143.1    GL434548    EFN74774.1    KK107017    EZA62822.1    QOIP01000002    RLU26028.1    GEBQ01023778    JAT16199.1    GEBQ01014569    JAT25408.1    GEBQ01011471    JAT28506.1    KQ982580    KYQ54483.1    ADTU01007024    ADTU01007025    ADTU01007026    ADTU01007027    ADTU01007028    KQ976731    KYM76178.1    GL887707    EGI70315.1    GAKP01006554    JAC52398.1    GAMC01015961    GAMC01015960    JAB90595.1    GL763245    EFZ19995.1    GAKP01006553    JAC52399.1    GAMC01015959    JAB90596.1    AXCM01007502    CM000071    EAL26624.2    CH479216    EDW33592.1    CP012524    ALC42078.1    ENO01991.1    AE013599    AY069501    AF022713    AHN56292.1    AHN56293.1    OUUW01000001    SPP72778.1    GDHF01030310    GDHF01004264    JAI22004.1    JAI48050.1    GDHF01021242    JAI31072.1    CH963719    EDW72031.1    BT125004    ADI46800.1    AAAB01008986    EAA00281.4    CM002911    KMY94319.1    SPP72779.1    KRF97475.1    CM000158    EDW91890.1    CH954179    EDV55725.1    KRK00184.1    APCN01003284    KMY94318.1    CH933808    EDW10534.1    KRG05298.1    AXCN02001828    CH916375    EDV98371.1    KQS62431.1    GFXV01001020    MBW12825.1    ABLF02025610    KRG05297.1    ATLV01027094    KE525423    KFB53885.1    ABLF02030095    ABLF02030098    ABLF02030100    ABLF02030103    ABLF02058899    GFDG01001691    JAV17108.1    CH940648    KRF79307.1    CVRI01000073    CRL07795.1    GGMR01002684    MBY15303.1    GFDG01001698    JAV17101.1    GBXI01004810    JAD09482.1    GGFM01000373    MBW21124.1    GGFK01001004    MBW34325.1    KQ971320    EFA00540.2    GBXI01007640    JAD06652.1   
Pfam
PF07690   MFS_1
Interpro
IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR004745   Pi_cotranspt       
SUPFAM
SSF103473   SSF103473       
PDB
6E9N     E-value=2.91164e-12,     Score=174

Ontologies

Topology

Subcellular location
Membrane  
SignalP
Position:   1 - 22,         Likelihood:  0.903165
 
 
Length:
472
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
194.3137
Exp number, first 60 AAs:
11.48537
Total prob of N-in:
0.58053
POSSIBLE N-term signal
sequence
outside
1  -  53
TMhelix
54  -  76
inside
77  -  82
TMhelix
83  -  105
outside
106  -  109
TMhelix
110  -  132
inside
133  -  143
TMhelix
144  -  166
outside
167  -  175
TMhelix
176  -  198
inside
199  -  276
TMhelix
277  -  299
outside
300  -  337
TMhelix
338  -  360
inside
361  -  372
TMhelix
373  -  395
outside
396  -  409
TMhelix
410  -  429
inside
430  -  472
 
 

Population Genetic Test Statistics

Pi
249.395605
Theta
190.767462
Tajima's D
0.932665
CLR
0.174466
CSRT
0.64086795660217
Interpretation
Uncertain
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