Gene

KWMTBOMO04316

Pre Gene Modal

BGIBMGA014109

Annotation

PREDICTED:_rac_GTPase-activating_protein_1-like_[Plutella_xylostella]

Location

Bomo_Chr8(-):2995405-3003305      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.998

CDS

ATGAGTTCAGAAAATTCAGATTCCGGTCCAAGCATCGCGCTCTCCCTTGTAGCCCAATTTGATGACATCAACCGCTTGAATAATGTTTTAAATGATGGAGCCGCAGAAGAATATTTCTTAGCATTCTTAAAGCAAATGGAATGGGTGCGCTGTCAATGGGCAGCAGCCGAGTCCGAGGCTGTTCGCCTTCAAAGTGAGCTTGACGAAGCTCTAAAGACACTAGGCAAGTGGGAATCTAAGTTTGCTCATGTCAGGAAACTGCTTGATGGAGAAAAAAGAGAAAGAAACATAATATTGAAGAAGTACAATGAACTGAGTAAACTACTGGACATGGCCCGTGACCTCTTATTCAATGACAATCGTGCCAAGTTGAATGATGAAACCTTACAGAAGCTTGCATTCCTTAATGGAACTGCTCAACAAGACCACAATGCTAAGCTTAGTGGAGTTCCAGAACTTAATTCTACTGGTACACTACTATCAGAGATGTCATATTCTCGTTCGGAAGATGACCTAGACCTGTCACTGGCTTCGTCTCGACGTTCTTGGGTTCAGCGCGGCGGGTGGCATGCCAGAGAGAACCAGCCCGCCAATAAGAAAAGGCGATCGTCAACTTCCTCTGCTACTAAAACAGTGGAGTTGCAGGGCGGCAAGGTGCTGGCCACCGCTACCACTACACTGACACTGGAACGAGCCCCAACCAACCATGACCTCAAGCCTCCACAGAACTTTCAACCAATATCGGAGAGTAGCGACGAAGCACCACCCCCTCCACGGAAGTCTTCAGCTCGTACATCGGGGGGTGGCGTGACTGCCATCAAAGAGGAGTATACACCCTCAGCACCGCCTCGTACAGAAACAGAGAGCGGGTCGGACACCCCCCGCGCGGCGCCGCAGCGGACCCCCTCCATCATCTCTGCGGCCTACGGCTCGCCCCGCAACCGCGTGCGCCAACACAACTTCGTGGCCAAGAACTTCTACAAGAGGGAGACATGCGGGCCCTGTGGGAAGACCATCAAGTTTGCTAAGATGGGCGTGAAATGCGAGTCGTGCCGCGGGCAGGCGCACCACGAGTGCCGCGCCATGCTGCCGCTGCCCTGCGTGCCGCCGCCCGCGCAGGCGCCGCGACACACGCAGCAGGAGGGCTGTATCTCTGACTACGCGCCCACCACCCCGCCGATGGTGCCGGCCTTGATGGTACATTGTATTAATGAGATCGAGAAACGCGGACTCAGCGAGAGGGGAATCTACAGGATCAGTGCCACAGAGAAGGATGTTAAAAGGCTCAAGGAGCGGTTCCTGCGCGGGCACGGGTCGCCGTGGCTGGCGGGCGAGGACGTGCACGCGGTGTGCGGCTGCGTGAAGGACTTCCTGCGCGGACTGCGCGAGCCGCTGGTGAGCGCGGCGCTGTGGGCCGACTTCATGCAGGCCGCCGCGCTGCCCGACCGCGCCGACGCCGCCGCCGCGCTGCTGCACGCCGTCACGCAGCTGCCGCCGCCCAACCGCGACACGCTCGCCTTCCTCGTGCTGCATCTGCAGAAAGTGGCAGAGAGCCCCGAATGCGAGATGGGCATAGACAATCTGGCTAAAATATTTGGTCCGACCGTCGTCGGGTACGGCATGATGTCGCAAGCCGCGGAGATGTACGCCGCCACAGCGCAGATGTTCAAGGTGATGCAGATAATGCTGTCGCTGCCGAGCGAGTACTGGGCGCAGTGGGCGTGCCCGGCGGACGGCGCGGGCTCGCCGCGGCCCCGGGCCTTCTTCTTTTCGCCGGCCGACACGGGTGTGTCGAGGAAGAAGCGCAACTATTTCCAGTGA

Protein

MSSENSDSGPSIALSLVAQFDDINRLNNVLNDGAAEEYFLAFLKQMEWVRCQWAAAESEAVRLQSELDEALKTLGKWESKFAHVRKLLDGEKRERNIILKKYNELSKLLDMARDLLFNDNRAKLNDETLQKLAFLNGTAQQDHNAKLSGVPELNSTGTLLSEMSYSRSEDDLDLSLASSRRSWVQRGGWHARENQPANKKRRSSTSSATKTVELQGGKVLATATTTLTLERAPTNHDLKPPQNFQPISESSDEAPPPPRKSSARTSGGGVTAIKEEYTPSAPPRTETESGSDTPRAAPQRTPSIISAAYGSPRNRVRQHNFVAKNFYKRETCGPCGKTIKFAKMGVKCESCRGQAHHECRAMLPLPCVPPPAQAPRHTQQEGCISDYAPTTPPMVPALMVHCINEIEKRGLSERGIYRISATEKDVKRLKERFLRGHGSPWLAGEDVHAVCGCVKDFLRGLREPLVSAALWADFMQAAALPDRADAAAALLHAVTQLPPPNRDTLAFLVLHLQKVAESPECEMGIDNLAKIFGPTVVGYGMMSQAAEMYAATAQMFKVMQIMLSLPSEYWAQWACPADGAGSPRPRAFFFSPADTGVSRKKRNYFQ

Uniprot

A0A2A4J702   S4P8B9   A0A194PZ90   A0A212EHK2   A0A194RGU9   A0A0C9RVA7   + More
A0A2A3EK46   A0A088A8S3   A0A154PHL2   A0A0J7N4N6   E2AGL2   A0A0M8ZV47   W8BTB2   A0A1I8NZN5   U4UBF4   N6SXR9   A0A0L0C199   A0A3B0J0N5   A0A1W4VG13   D6WE23   A0A1A9YQW3   A0A1A9VW66   A0A0P6EIM3   A0A0P5A6L5   B4J591   A0A164WP98   A0A0P6IEL0   A0A1J1HXT6   A0A1I8MY60   E9I1D9   V9KKT3   A0A0P5QBK3   T1HE66   A0A0P5XWY4   A0A3Q0SBD0   A0A226EHM0   A0A0P5RFX6   A0A0P6FX77   G1PTH8   A0A3B4F1A7   A0A1A8V9D2  

Pubmed

23622113    26354079    22118469    20798317    24495485    23537049    + More
26108605    18362917    19820115    17994087    25315136    21292972    24402279    21993624   

EMBL

NWSH01002802    PCG67506.1    GAIX01004239    JAA88321.1    KQ459583    KPI98652.1    + More
AGBW02014869    OWR40966.1    KQ460211    KPJ16550.1    GBYB01012795    JAG82562.1    KZ288230    PBC31632.1    KQ434899    KZC10818.1    LBMM01010208    KMQ87610.1    GL439322    EFN67432.1    KQ435855    KOX70636.1    GAMC01006358    GAMC01006357    JAC00199.1    KB632003    ERL87916.1    APGK01052935    KB741216    ENN72549.1    JRES01001139    KNC25229.1    OUUW01000001    SPP74275.1    KQ971324    EFA01222.2    GDIQ01061952    JAN32785.1    GDIP01203419    JAJ19983.1    CH916367    EDW00717.1    LRGB01001151    KZS13451.1    GDIQ01005675    JAN89062.1    CVRI01000035    CRK92895.1    GL733767    EFX62190.1    JW866272    AFO98789.1    GDIQ01119521    JAL32205.1    ACPB03026840    GDIP01066205    JAM37510.1    LNIX01000003    OXA57112.1    GDIQ01101240    JAL50486.1    GDIQ01052813    JAN41924.1    AAPE02023535    HAEJ01015979    SBS56436.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000242457    UP000005203    + More
UP000076502    UP000036403    UP000000311    UP000053105    UP000095300    UP000030742    UP000019118    UP000037069    UP000268350    UP000192221    UP000007266    UP000092443    UP000078200    UP000001070    UP000076858    UP000183832    UP000095301    UP000000305    UP000015103    UP000261340    UP000198287    UP000001074    UP000261460   

Pfam

PF00620   RhoGAP        + More
PF00130   C1_1
PF13855   LRR_8
PF09741   DUF2045

Interpro

IPR000198   RhoGAP_dom        + More
IPR008936   Rho_GTPase_activation_prot       
IPR002219   PE/DAG-bd       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR019141   DUF2045       

SUPFAM

SSF48350   SSF48350       

Gene 3D

1.10.555.10     3.80.10.10    

CDD

cd00029  C1

ProteinModelPortal

A0A2A4J702   S4P8B9   A0A194PZ90   A0A212EHK2   A0A194RGU9   A0A0C9RVA7   + More
A0A2A3EK46   A0A088A8S3   A0A154PHL2   A0A0J7N4N6   E2AGL2   A0A0M8ZV47   W8BTB2   A0A1I8NZN5   U4UBF4   N6SXR9   A0A0L0C199   A0A3B0J0N5   A0A1W4VG13   D6WE23   A0A1A9YQW3   A0A1A9VW66   A0A0P6EIM3   A0A0P5A6L5   B4J591   A0A164WP98   A0A0P6IEL0   A0A1J1HXT6   A0A1I8MY60   E9I1D9   V9KKT3   A0A0P5QBK3   T1HE66   A0A0P5XWY4   A0A3Q0SBD0   A0A226EHM0   A0A0P5RFX6   A0A0P6FX77   G1PTH8   A0A3B4F1A7   A0A1A8V9D2  

PDB

3W6R     E-value=1.56453e-45,     Score=463

KEGG

101746467    K16733 Rac GTPase-activating protein 1 | (RefSeq) rac GTPase-activating protein 1-like

GO

GO:0046872   GO:0035556   GO:0007165   GO:0090090   GO:0001709   GO:0032465   GO:0042060   GO:0048471   GO:0008283   GO:0055028   GO:0000281   GO:0007525   GO:0005819   GO:0030496   GO:0005634   GO:0070507   GO:0032507   GO:2000736   GO:0048813   GO:0007266   GO:0051988   GO:0005654   GO:0032154   GO:0005547   GO:0019901   GO:0051233   GO:0045995   GO:0000915   GO:0008272   GO:0097149   GO:0005096   GO:0043014   GO:0007405   GO:0043015   GO:0007283   GO:0048487   GO:0032467   GO:0008017   GO:0051256   GO:0031234   GO:0000226   GO:0016757   GO:0006508   GO:0005622   GO:0009113   GO:0005524   GO:0009058   GO:0016742   GO:0003824  

Length:

606

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.50678

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00065

outside

1  -  606

 

 

Pi

240.986837

Theta

191.77178

Tajima's D

1.134379

CLR

0.384572

CSRT

0.692165391730413

Interpretation

Uncertain