SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04312
Pre Gene Modal
BGIBMGA014111
Annotation
Calpain-7_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.513
 

Sequence

CDS
ATGTCTGACCTAACTAATGCATCGGAAGCTGCATCTCTTGCTGTGCGTTTCGATGTCGCAGGAGAAACAGAAAAAGCTGCAGAATGCTATAGAACCGCTGCAAGACTATTAGATCGAATTATGGATCGTCTACCACCAGAAAAACAAATAGAATTGAGATATAAAGTCCGCGAATATCTTGAAAGAGCAAATTTATTACTAGAAAAAACAGATCGAACTCAGCAGGCTGAAGTTGAACGTGCAGTACAACAGTGCTTTTTCCTAATGGAGCAAGCGTTAGATGCTGATAACGCAGAACAAACAGATTCAGCACTGAATCTTTATATGCAAGCTGTTGAATTCGCAGTTAATATTAAAACAGATGACACAGATGTGAAAACAAATTTGAAGAACTTAGCTAAAAAGGCATTAGATAGGGCTGAGCAAATAAAAGGTTTAAAGAAATTAAATTCTCTGTCTATATCTAAACCAAAAAATCCACCTAAAATACAAAGGGAGCAGAGTGTCCACTTAAAAGTCTCAGGAAAAAATGCTATTTACACAGAAGAAGAAAAAGAAGTGTTACGTACAACATCGAACATTAACAACAATTGCTTTCTACCGTTCATGGATATTGATTTGTCTGAGAGATTCCAATATGCCATACCTTTTGAGGATAGAGCCAGTGAACTGAAATTATCGGCGAAGCAAGCTCAGGAATTTGACTGTTGGATTCGTCCGCATGAGATTTGCACTAACCCAATGTTAATTGTAGGAGATCGTATTGATTGTTTCAGTATTAAGCAAACTATAGTATCTGATTGTTCGTTTGTCGCTTCTTTAGCGGTAAGCGCGTTGTACGAGAAGAGATTTAACAAAAGCATCATCACATCGATTATTTATCCAAAGAATAAGAATAAAGTTCCAGTTTACAACCCGTTTGGGAAATACATGGTGAAATTACACTTGAATGGGGTCAGAAGGAAGGTCATCATAGATGATCGTCTGCCGTACAGCCGACAACGCCGTCTGCTGTGCTCGTATTCAAGTAACAGAAACGAGTTCTGGGTGTCTCTGCTGGAGAAAGCTTACATGAAAGTGATGGGAGGATATGACTTTCCCGGTTCGAACAGCAATATAGACCTGCACGCCCTGACCGGCTGGATACCGGAGCGGAGCGCCATAAGGAACAGCGACGAGGACTTCAACGCGGACGCGCTGTACGAGACGATCCGGACGCGGCTGGAGCGCGGCGACGTGCTGGTCACCGTCGCCACCGGCCCGCTGTCCGACGCGCAGGCGCAGCGGACCGGCCTCGTGCCCACGCACGCCTACGCGGTGCTCGATGTACAACTTGTGAACGGCGTGAAACTGCTGAAACTGAAGAACCCGTGGTCGCACCTGCGCTGGCGCGGCAACTACTCGGAGCTGGACGCGGCGCACTGGACGGCGCGGCTGCGCGCGGCGCTGCGCTACGACCCGGACAGCGCGGCGCAGTACGACAACGGAGTCTTCTGGATCGACTACGCCAGCATCCTCAACTTCTTCGACGTCTTCTACTTGAACTGGAACCCGGCGCTGTTCCAGTTCACCTATTGCATACACCAAAAGTGGGACGCCGGGAACGGTCCCGCGAAGGACGCTTACAACATCGGCGACAACCCGCAGTTCTCGCTGCAAGTCCACGGCAAGGGGGTCGTGTGGCTGCTGCTGACCAGGCACATCACCAACATAGACGACTTCAGGGACAACAAGGAGTACATAGCGCTACTCGTCTACAAGAACGAAGGGAAACACGTGTACTATCCGTACGATCCTGAGCCCTATATCGACGGAGTAAGGATCAACAGTCCACATTACCTCTGCAAGATCATAGTCGGGGAAGGCAGCACAGATCTCTACACACTGGTCGTCGCACAGTTCGAGAAGACGAAAACCATATACTACACATTGCGTGCGTACGGCACGTGTCCGTTCGCTTTATCCAAACATGAACCTTATCCTTATGTCAAAACGCTGAAGGGCGAGTGGTCGGGTCGGAGCGCGGGCGGCTGCGAGAACCACCGGCTGACGTACCCGCACAACCCCAAGTTCGCGCTGGGCGTGCCGGACGCGCGGGCCTGCAGCGTGCTGCTGCAGCTCAAGGGCCCCAAGCAGTACCAGCTCGGGATGGACGCGAAGGTCGAGGCGCTGGACGACCCGAACGTCACTGCACCCTTCCTGAAACTCACTTCTGGACCGTTCAGATCGGGTTTCGTGGTACTGGAAATGCCGAACCTACCGGCCGGTAAGTACGTAGTGACGGTATCCACGTTCCTGCCCGGGCAGGAAGGGCCCTTCATACTGGAGTTGAGGTCCACCTGCCCGGTGACATGCGAGCAGCGCGATTAG
Protein
MSDLTNASEAASLAVRFDVAGETEKAAECYRTAARLLDRIMDRLPPEKQIELRYKVREYLERANLLLEKTDRTQQAEVERAVQQCFFLMEQALDADNAEQTDSALNLYMQAVEFAVNIKTDDTDVKTNLKNLAKKALDRAEQIKGLKKLNSLSISKPKNPPKIQREQSVHLKVSGKNAIYTEEEKEVLRTTSNINNNCFLPFMDIDLSERFQYAIPFEDRASELKLSAKQAQEFDCWIRPHEICTNPMLIVGDRIDCFSIKQTIVSDCSFVASLAVSALYEKRFNKSIITSIIYPKNKNKVPVYNPFGKYMVKLHLNGVRRKVIIDDRLPYSRQRRLLCSYSSNRNEFWVSLLEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERSAIRNSDEDFNADALYETIRTRLERGDVLVTVATGPLSDAQAQRTGLVPTHAYAVLDVQLVNGVKLLKLKNPWSHLRWRGNYSELDAAHWTARLRAALRYDPDSAAQYDNGVFWIDYASILNFFDVFYLNWNPALFQFTYCIHQKWDAGNGPAKDAYNIGDNPQFSLQVHGKGVVWLLLTRHITNIDDFRDNKEYIALLVYKNEGKHVYYPYDPEPYIDGVRINSPHYLCKIIVGEGSTDLYTLVVAQFEKTKTIYYTLRAYGTCPFALSKHEPYPYVKTLKGEWSGRSAGGCENHRLTYPHNPKFALGVPDARACSVLLQLKGPKQYQLGMDAKVEALDDPNVTAPFLKLTSGPFRSGFVVLEMPNLPAGKYVVTVSTFLPGQEGPFILELRSTCPVTCEQRD

Summary

Similarity
Belongs to the peptidase C2 family.
Belongs to the PI3/PI4-kinase family.
EMBL
BABH01032016    ODYU01004589    SOQ44621.1    KQ459583    KPI98647.1    KQ460211    + More
KPJ16554.1    GDQN01008410    JAT82644.1    GEDC01018699    GEDC01014736    GEDC01009502    GEDC01001160    JAS18599.1    JAS22562.1    JAS27796.1    JAS36138.1    GEZM01063698    JAV69017.1    NEVH01027081    PNF13722.1    KK853387    KDR07957.1    KQ980304    KYN16804.1    NNAY01000179    OXU30264.1    GL448819    EFN83726.1    GL440281    EFN66062.1    ADTU01018472    GL888176    EGI65944.1    KQ971363    EFA09011.1    KQ982254    KYQ58641.1    KQ981820    KYN35293.1    GL764146    EFZ18238.1    PNF13721.1    AAZX01003655    KZ288201    PBC33548.1    KK107178    EZA56044.1    FX985383    BAX07396.1    KQ434783    KZC04878.1    KQ978390    KYM94317.1    KQ435687    KOX81397.1    DS235813    EEB17482.1    APGK01039001    KB740966    KB632186    ENN76934.1    ERL89704.1    JXUM01085549    KQ563509    KXJ73724.1    GBYB01005839    JAG75606.1    CH477343    EAT43044.1    GFDL01009181    JAV25864.1    GANO01003093    JAB56778.1    KQ414705    KOC63191.1    DS231896    EDS44444.1    GFDL01009185    JAV25860.1    ATLV01020738    KE525306    KFB45714.1    AAAB01008823    EAA05522.4    KQ976465    KYM84286.1    AXCM01003767    AXCN02001814    APCN01003462    GGFK01009164    MBW42485.1    GGFJ01002555    MBW51696.1    ADMH02001629    ETN61704.1    GGFJ01002556    MBW51697.1    GGFJ01002557    MBW51698.1    GGLE01006812    MBY10938.1    UFQT01000218    SSX21874.1    ABLF02035500    ABLF02035507    UFQT01001264    SSX29756.1    GGFK01009425    MBW42746.1    GFJQ02003299    JAW03671.1    JH432223    GFPF01006483    MAA17629.1    GEGO01002317    JAR93087.1    GACK01002777    JAA62257.1    GEDV01001075    JAP87482.1    GEFM01002308    JAP73488.1    LRGB01002190    KZS08702.1    GDIQ01106280    JAL45446.1    GFAA01003460    JAT99974.1    CVRI01000040    CRK94872.1    GDIP01102727    JAM00988.1    GDIP01164430    JAJ58972.1    GFDF01004365    JAV09719.1    KK854846    PTY19194.1    MTYJ01000047    OQV18704.1    GDIP01152380    JAJ71022.1    AJWK01020304    GDIQ01172999    JAK78726.1    KK120094    KFM77503.1    GL732550    EFX79800.1    GEDV01009504    JAP79053.1    GFAC01001266    JAT97922.1    GDIQ01009664    JAN85073.1    QCYY01001692    ROT76129.1    GECL01002892    JAP03232.1    GFTR01008039    JAW08387.1    GBBI01004668    JAC14044.1    IACF01004433    LAB70027.1    GBGD01000518    JAC88371.1    BDGG01000008    GAV02709.1    NHOQ01001560    PWA23905.1   
Pfam
PF04212   MIT        + More
PF00648   Peptidase_C2
PF01067   Calpain_III
PF11669   WBP-1
PF00454   PI3_PI4_kinase
PF00613   PI3Ka
Interpro
IPR038765   Papain-like_cys_pep_sf        + More
IPR022684   Calpain_cysteine_protease       
IPR022683   Calpain_III       
IPR036181   MIT_dom_sf       
IPR001300   Peptidase_C2_calpain_cat       
IPR022682   Calpain_domain_III       
IPR036213   Calpain_III_sf       
IPR007330   MIT       
IPR021684   WBP1-like       
IPR016024   ARM-type_fold       
IPR001263   PI3K_accessory_dom       
IPR015433   PI_Kinase       
IPR042236   PI3K_accessory_sf       
IPR011009   Kinase-like_dom_sf       
IPR018936   PI3/4_kinase_CS       
IPR000403   PI3/4_kinase_cat_dom       
IPR036940   PI3/4_kinase_cat_sf       
SUPFAM
SSF116846   SSF116846        + More
SSF54001   SSF54001       
SSF49758   SSF49758       
SSF56112   SSF56112       
SSF48371   SSF48371       
Gene 3D
PDB
2QFE     E-value=1.11636e-23,     Score=275

Ontologies

Topology

Length:
789
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0284
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00029
outside
1  -  789
 
 

Population Genetic Test Statistics

Pi
243.735069
Theta
193.524777
Tajima's D
1.124931
CLR
0.01176
CSRT
0.699265036748163
Interpretation
Uncertain
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