Silkworm Genome Informatics Database

Gene

KWMTBOMO04307

Annotation

PREDICTED:_calmodulin-binding_transcription_activator_2_[Bombyx_mori]

Location

Bomo_Chr8(+):2402255-2403796 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.125

CDS

ATGGATGTTTCAGTGAATTTAATAATTGTACGTGGGAAGAATTCACGACTAGCGTTACAGAACGCACGAGCCGAAAGCGGGAAGGTGGTCCGGCTGTCGCAGGATGTCCGCCGAAACTCATTGCAGCGCATTACCAATACACCAACCACGCCCAATAGGATTGTGGATTACTTAGCACCGGAGTCTCCTATGAACGCTGACGAAGAACTGTTGCTTGAACTTCTGTTCAGGATGTGA

Protein

MDVSVNLIIVRGKNSRLALQNARAESGKVVRLSQDVRRNSLQRITNTPTTPNRIVDYLAPESPMNADEELLLELLFRM

Uniprot

A0A1E1W4L4 A0A2H1VXZ5 A0A3S2NLE1 A0A212EP50

Pubmed

22118469

EMBL

GDQN01009233 JAT81821.1 ODYU01004962 SOQ45362.1 RSAL01000298 RVE42790.1 + More
AGBW02013518 OWR43272.1

Proteomes

UP000283053 UP000007151

Pfam

PF00612   IQ        + More
PF01833   TIG
PF03859   CG-1

Interpro

IPR039033   Camta1        + More
IPR000048   IQ_motif_EF-hand-BS
IPR027417   P-loop_NTPase
IPR013783   Ig-like_fold
IPR002909   IPT_dom
IPR014756   Ig_E-set
IPR020683   Ankyrin_rpt-contain_dom
IPR036770   Ankyrin_rpt-contain_sf
IPR005559   CG-1_dom

SUPFAM

SSF52540   SSF52540        + More
SSF81296   SSF81296
SSF48403   SSF48403

Gene 3D

1.25.40.20 2.60.40.10

CDD

cd00204 ANK

ProteinModelPortal

A0A1E1W4L4 A0A2H1VXZ5 A0A3S2NLE1 A0A212EP50

KEGG

101735868 K21596 calmodulin-binding transcription activator | (RefSeq) calmodulin-binding transcription activa

GO

GO:0003677

PANTHER

PTHR23335:SF11

Length:

78

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20954

outside

1 - 78

Pi

85.041163

Theta

238.209674

Tajima's D

-2.025224

CLR

3710.809859

CSRT

0.0122993850307485

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics