SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04304
Annotation
PREDICTED:_uncharacterized_protein_LOC101747137_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.937
 

Sequence

CDS
ATGCCGATCACCAGGAGCAACAAGGGATCATCGAGGGAACAGCCACTCGAACCTGCGGTTCAAGAATCCAGTCCGGAGGCAACAGAAGCGACGTCGTACGAAACATACGAGAGCTCCGCGACCGGTACGACCCAGAACACAAAACTTGAAGAGGCAACGACGCGGACACGTGGTGAAAATAGACCCGCGTCGAAGAAATCGCTACGACGTAAGGAACTGGCAGCGAGAGCGGAGCTGGCGGAAAAAGAATTGATAGAAGCACAAGCAGCCACTATAGCCGCCAGACTCCGCCTGCAATTGATTCAGGCCGAAAGCGAAGACGACGATGATTCCATTATAGAAGAGCCAAAGGACCGGGAGGACCAGGTTAGGGCCTGGGTCCAGACGTCGGCGGGCAGTATGGACAAGGAGCCCGCAGGCGAGCACATTGAGAACCACCCCGTCAGCAAGGCCAACATGGAAGATTGCAGCAACAGGGACCTGGCTAAGGCGATAGTGGAAGCAGTGAGGAGCGCAACGACCAAGGAGCTGCCGCCACAACCCGACTACATGCACCAGTTGCCGACGTTCGAAGGCGACTGCAGGGAGTGGGTGGCCTTCAAGGCTGTCTACGAGGATACCGCTCCACTCTTCTCAAGCGCTCAAAACATGGCGCGGCTGAGAAGAGCGCTGAAAGGACAAGCCAGGGAAGGAGTCCGCAGCCAGCTGTACTCCGAGAGCACACCGGAGGAAGTAATGGAATCACTGCGGCGGTGCTATGGAAGGGCGGACGCTTTAGTCTTAGCGGAGCTAGACCGCATACGAAGACTTCCAACGATAAGCGACTCCGCCTACGACATTTGCTCACTGGCGAGCAATGTTAACAATACCGTCGCAGCGATCAGGGGGCTGCGGAAACCCCAATATTTGATGTCGCCCGAACTGCTGAAGAGCATCGTCGACAAGATGCCGACCATCCTGAGGTTCCGGTGGTACGATCACATTATCGAAAAGACCGAAGGAGACCCGGACCTCAACACGATGTGCGGCTTCCTGAACAAGATGGCGGACCGGTGCGGGCCACACGCCGTGGCTGAAGTAGCAACGAAAAGACAACCATCGAGGCGACAGGCGACGCACGCCACAACCGACTGCACCGAGCGCGCAACTTCGGACAGAGTAATAATAGACAAGCCGGCGTGCCCGCAATGCAAGGATGGACACCCGCTGTACGATTGTCCGAGGTACAAGGGCGCTACAGTGCAGGAACGATGGAGAATGGCAAAGGAGTCGCGCCTATGTTACAAGTGCCTCGATGGTGAGCACCGAAAGCAATCGTGTCAACGACCGCCATGCCGCACGTGCAAGCGCTGGCATCACCACTCGCTACACAACGAGAAGCCGGAGACAGAGCCAGCAGAGAACAGGGAAATCGCGAACAACGTGCGACTTCCCATCAACTGCACACAGATCAGCAGGGCGTACTTGAAGATGGTGCCCGTTGAAGTGTACGGGCCATCGGGATCGACGACGGTGCTGGCCCTGCTGGACGAAGGCTCCACTGTAACTCTCCTGGACTCGAGCGTGGCGAAGCAGATCGGCCTGAAGGGACCCAAGGAGACGCTCCGCCTCGAGACCGTGGGCGGGAAGACCCTAACGAAGAAGGACTCGATGAAGCTTAACATCAGAGTTCGAGGGCTTCACCAGCGGCAGAAGAGAATGATCTTCGGAGCGCGCACAATGGATGACATGAGCCTTGCACCCCAGCGACTGAAAAGAGAGACCATCGAAGGCTACGCACACCTGAAGAGCCTGGCGGACCAGTTATGTTACAATGAACAATCCCCCCAACTATTGATCGGGCAGGACAACTGGGGACTCATCGCCGCCAAGAAGACGCGCAGAGGCAGGAGGAACCAGCCGGTAGCCTCATTCACCCAATTGGGATGGGTGCTACATGGCCTCGATGGCAACAACGCGAAAGAGGTCAACTTCCTCACCTGCGCCCATGTATCGATGCCCGAAGAGGCCTTGGACAGATTAGTGAAGGAGCACTTCGCGATAGAGTCGCACCCAAGCGTCCGGGCACGGATATGGAGGCAAAGGCGCTCGACATCTTGGAGAAGGAGGACGACAGAGGTTGGAGACGCGATGACGGCCGCTTCGAAGCTCGGACCTACAATCCCTGTTCGAAGCGTTGTTGCAGTTCCGGAAAAGGCTCGTCGTGGTTGTCGCGGACATCAAGGAGAGACATCGATATCCAGAAGCCGCGTGGGCAATAGAAGGCGCTGCATTCTGGCGAGCCTCGCAGGCGGTGTGACCCCAGGAGACATAGAGCTGGGGTCGAAGGAAGAAAAGACCCTGGGCCTGCGGTGGTTCTACGAGTCGGACGAGGTGGGATTCCGGACACGTCCACGAGACCCAAAGGATATAGAAGCACGGACCCCGACCAAACGAGAAGTAACTAGCGCGGTAATGTCAACCTTCGACCCTATGGGGCTGGCATCACCCGTGCTAATAGAAGGGAAAGCGCTCACTCAGAGCATTTGGCGGAGCGAGATCGACTGGGACGACGTCATCCTGGAAAAGGACGAGGTGGCGTGGAAACGCTACATGGAGAACCTCCGCACGTTGCAAGGCCTCCGAATAGCAAGGTGCTTCTCGTGCTGCAACACTGAGGGGGAGCTGCACACGTTCACCGACGCCAGCGAGAAGGCCTACGCGTGTGCAGTCTATTGGCGTCAGAAGACAGATGAGAGCACCTACCGCGTCACGCTTCTAGCAGGGAAAGCCAGGGTGACCCCACTGAGACCAGTCTCTATCCCAAGGCTGGAGCTGCAAGCTGCACTGCTGGGGACAAGGATGGCGCAGGCGATAGCGAACGAATTGGACATCGCGGTCGGCAGAAGGACGTACTGGACTGACTCCAGTACAGTCCTGACATGGATAAAGACCGACCCACGCACGTTCAAACCTTTCGTTGCGCACCGACTCGCCGAGATAGAAGAGTCAACGAAGCCCCAAGAATGGCGATGGGTGCCTGGCTCGCAGAACCCAGCAGACGACGCAACTAGAGAGGCGCCGGCGGATTTCGACCACACGCATCGGTGGTTTAATGGACCCGAGTTCCTGTCGTGGGATGAATCGCGCTGGCCCAAGCCGCGAACATTCAAGCAAGAACCGTCTGGAGAAGAGAAAGAGGCCTTCCTGGTCGCCACGGCGAGGACCGCTGACGCTCGACCCACGCCCGATCCGCACAGATTCTCGAGCTGGGTCAAGTTATTGAGAGCAACAGCCAGGGTCCTCCAATTTATCGAGCTGTGTCGACCCCGGAAGGAGAGCGCCTGCGTGTCCAGACAATTGGAGCAGCAAGATCCCACGTGGAGGACGACGCGAGCGAAGCAGCCCCGATCAACATGGAAGATAAGGACTCCAGAAGCACCTACAAAAGCGTGGCTGCTGCTTGATCCAATCCACTTGAAGGAAGCGGAGAAGATCCTACTGAGAGGCAGCCAAGGAGAGAGCTTCGGTGAAAAAGATCCCGAACGTCACCCCAAGTTGCGACGGCTCGACGTCGTGATGGAAGATGGCCTGTTGCGCATGCACGGACGTATCGACGCAGCGCAATACATAGATGCAGACCGCAAGCGACCGATCGTACTGGACGGGAAGCACGTGATAGCGAGATTATTGATCAAACACTATCACGAGGCGTTCCAGCACGGTAACCACGCAACGGTGATGAACGACGTGCGGCAGCGCTACTGGATCCTAGGTCTAAGATCGATCATTCGAGCGACGGCCGCCCGATGCCAGTGGTGCAAGGTCTATCGGAGTACACCACGACTACCGCCCACCGGAGACCTGCCAATAGAGCGGCTACGACATGGAGAGCCGCCGTTCACCTGTGCTGCCGTCGATTACTTCGGGCCGATGACGGTGACTGTAGGACGACGTCACGAGAAGAGGTGGGGCGTGCTGTTCACATGCCTCACCACGAGAGCAGTCCACATGGAGCTAGCAGCGTCACTGACGGCAGACTCAATGCTGTTAGCGCTGCGCAGGATGGCCGCCCGGCGAGGAACGCCCAAAGTCATTTACAGCGACAATGGGACTAACTTCGTCGGCGCCAACAAGGAGCTCAAGCAGGCAATCGAGAATGCAAGGGAAGCAGACGTCGTGTCACGGGCCGCTCAGATGAACATAAAATGGAAGTTCATCCCGCCGGGAGCGCCGAACATGGGAGGCGCGTGGGAACGTTTGGTGCGGTCCGTGAAGACCGCGCTGGCGGTCACACTGAAAGAAAGACACCCGAGGGAAGAAGTTCTGCACACTCTTCTGTTGGAGGCGGAGCACGTCGTCAACTCGCGACCGCTCGTCGCCAGGGAAGAGAGTTGGGAGTCAGAGGCACTAACCGAACCACTTCCTCATAGGGAGGTCCTGCGGAGCTCCAAGCATCGGCGACTACAGAGACGAAGACCTGACTGGCAAAAGGACATGGAGAGTGGCGCAGCGTATGGCGGACCACTTCTGGAGTAG
Protein
MPITRSNKGSSREQPLEPAVQESSPEATEATSYETYESSATGTTQNTKLEEATTRTRGENRPASKKSLRRKELAARAELAEKELIEAQAATIAARLRLQLIQAESEDDDDSIIEEPKDREDQVRAWVQTSAGSMDKEPAGEHIENHPVSKANMEDCSNRDLAKAIVEAVRSATTKELPPQPDYMHQLPTFEGDCREWVAFKAVYEDTAPLFSSAQNMARLRRALKGQAREGVRSQLYSESTPEEVMESLRRCYGRADALVLAELDRIRRLPTISDSAYDICSLASNVNNTVAAIRGLRKPQYLMSPELLKSIVDKMPTILRFRWYDHIIEKTEGDPDLNTMCGFLNKMADRCGPHAVAEVATKRQPSRRQATHATTDCTERATSDRVIIDKPACPQCKDGHPLYDCPRYKGATVQERWRMAKESRLCYKCLDGEHRKQSCQRPPCRTCKRWHHHSLHNEKPETEPAENREIANNVRLPINCTQISRAYLKMVPVEVYGPSGSTTVLALLDEGSTVTLLDSSVAKQIGLKGPKETLRLETVGGKTLTKKDSMKLNIRVRGLHQRQKRMIFGARTMDDMSLAPQRLKRETIEGYAHLKSLADQLCYNEQSPQLLIGQDNWGLIAAKKTRRGRRNQPVASFTQLGWVLHGLDGNNAKEVNFLTCAHVSMPEEALDRLVKEHFAIESHPSVRARIWRQRRSTSWRRRTTEVGDAMTAASKLGPTIPVRSVVAVPEKARRGCRGHQGETSISRSRVGNRRRCILASLAGGVTPGDIELGSKEEKTLGLRWFYESDEVGFRTRPRDPKDIEARTPTKREVTSAVMSTFDPMGLASPVLIEGKALTQSIWRSEIDWDDVILEKDEVAWKRYMENLRTLQGLRIARCFSCCNTEGELHTFTDASEKAYACAVYWRQKTDESTYRVTLLAGKARVTPLRPVSIPRLELQAALLGTRMAQAIANELDIAVGRRTYWTDSSTVLTWIKTDPRTFKPFVAHRLAEIEESTKPQEWRWVPGSQNPADDATREAPADFDHTHRWFNGPEFLSWDESRWPKPRTFKQEPSGEEKEAFLVATARTADARPTPDPHRFSSWVKLLRATARVLQFIELCRPRKESACVSRQLEQQDPTWRTTRAKQPRSTWKIRTPEAPTKAWLLLDPIHLKEAEKILLRGSQGESFGEKDPERHPKLRRLDVVMEDGLLRMHGRIDAAQYIDADRKRPIVLDGKHVIARLLIKHYHEAFQHGNHATVMNDVRQRYWILGLRSIIRATAARCQWCKVYRSTPRLPPTGDLPIERLRHGEPPFTCAAVDYFGPMTVTVGRRHEKRWGVLFTCLTTRAVHMELAASLTADSMLLALRRMAARRGTPKVIYSDNGTNFVGANKELKQAIENAREADVVSRAAQMNIKWKFIPPGAPNMGGAWERLVRSVKTALAVTLKERHPREEVLHTLLLEAEHVVNSRPLVAREESWESEALTEPLPHREVLRSSKHRRLQRRRPDWQKDMESGAAYGGPLLE

Summary

Pfam
PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF17921   Integrase_H2C2
Interpro
IPR041588   Integrase_H2C2        + More
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
SUPFAM
SSF53098   SSF53098       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
1505
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0215
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  1505
 
 

Population Genetic Test Statistics

Pi
300.362572
Theta
193.161238
Tajima's D
2.003997
CLR
0.96618
CSRT
0.881105944702765
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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